Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0718100 |
| Transcript ID | LotjaGi1g1v0718100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; TAIR: AT2G03690.1 coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein; Swiss-Prot: sp|Q9ZPR0|COQ4_ARATH Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; TrEMBL-Plants: tr|A0A151UCY3|A0A151UCY3_CAJCA Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; Found in the gene: LotjaGi1g1v0718100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:128641475..128644490) extracted from Lotus japonicus Gifu genome v1.2.
ATGTGAAGGTAATAAAAAACAATTTAATTTAATCTTCATTCTTCATCATCACACACACACTACTAGAACCGAGATTCATT CTGCTTCATACGTCTTTGGCGGGACCCCTCTTATTCTCACGCCGCCGCAAGCCACCGTCTCCTCCGCCATCGCTCATTTT CCGGCCAAATTCAAACACTCGCATTATTCTCTCGCTTCTCAATCTTCCCTCTGATCCTCATCATCATCAACAAACAGGTT CACAATTTTCCTACTTTGATTTCCTTCCATTTCAATTCGCTCAAAACATCAAAAATTGGCATTGTCAATAACAGCACCAT GTTATGTTCAGATTTGAGTAGTTTAGTCGGTTGCAATGGTAGTAGGAGGTGGGAGAATCCGGCTGAACACATGGCAGCAG GCGGCGGTGGCGGTGGGCTCGGCGGTGGGTGCGTTGTTGGACCCTCGGAGAGCGGATTTGATAGCCGCTCTTGGTGAGAC TACTGGAAAGCCTGCATTTGAGAGGGTTCTTCAGAGGATGAAGAGTTGCCCTGAAGGGAGGGTCAGTTTTTCATTTTTAT AATTAATAATTAATTCCCTTTTTGCTTGATAGAAATCATGTTGTGAAAACAAGTTTGTTGTTGTTGTTGTTGAATGTTGA ATGTTGAATGTTGAATGTTGAATGTTGAGTGGCCTTTGTTTGATTATTTCACTTTTTATGGGATGTTTTCTAGCATTTAA CAACAAAGGTTTGTATTTTGGGTGAGAAAAGCTTTAGGATGAGATGAAAATGCTTGTGTCCTGGTCTTAGAGACTTTGTT AAGAAAAAAATTCAGATGGGGTAGCAAAAAATTGAGACTTGCAAATAACCCAACTTGCATTGGCAAGTAAGTAACAACTA ACAACACTGTTTTTCCCGCTGCGAATATGATATTGAACCAACTCCTTTTTGTTTTGGTAGAAGGTAATGAGGTGGTGTTT TGTTATTATTAGTACTTGTCAGTCGGAATGCATCCATGAGAGCTTAGGTGACAATGCCAATATGAGAAATGAAATTTTGG ATAGTGTAGTGGTTCCTTTTGGAATATTATGTGATGGCACATATTTGGTGAATTTCAAAAGTGTAGACTGGATATAAGGA TGATTGTTGATTCATTTTTTTGGACTGTCTTAGCGAGAGTTTGGAATAGGGCTTAACTCTACATAAAACCTTGCTTAAGG GGTGAGGATTGCCCTAACCTTCCTTATAAGAAAATTTTGGGGAGATCTCTAATCAATGTAAGACCTTAACACTCGTCTTA ACTCGTTAGATATGGAAATTGTACTGATTCGAGTAAATTTATGTTTTATCAGGATTTGGGATTGTCTTTCAATAAGAATG ATACATTTTTGTGGAATAGGTTGCAATTGTTGTGTGCCACAACACCATTGTACATTCCTTGTATTTATTTTATTATTTTC CATATCAGTTTGGAATTATGCTAAATTGTTATTGTGGTGATTGTTGTTTTGATAGTTTATGGAGCTCAGTAAGTGTCTTC CCACCCACCATAAATGTCTATAATTGTTTTTATGATCTATGCACATGTATATACACACATATAATGTGTTTTGCACCAAC TTATATTCAAAGTTAAAACCCCTCACTAGACCTCTTACTGGTAGGAGTGCAGCCCAAGGGATTCCTTGCCCTTTTATCAT CACTGCCAAAGGGCTGAAATGACCAAACTAATTATGTACTTTTAAGACTAGTAACTTGCTAATACTTGCTCACATCTATC TTATGCCAACTAATGTGCAATTAATGCACTTTGGACAATTACAGTTTATGCATTACTGAAATGCCTCTCTGGATAAGAGT GGTTATAATTATTTTTCTCTCAACAATGATTTTTATAACCAGTGTCTGTTGGTCCAAGTGCCAAAAAGCTTGATTGTTCT TAGGTATGGTCTCAGATTGAAATTTTGTGAATAAATTTTTTTGCTGAGAGAGCTTTGATCTCTTAGGTGAATCCACCATC TTGACTCAAATTAATTGGCGCCTAATGTGACTTTTGAATACTTAAGGTCTTGGTTAAAAAAAAAAAGACACAATGGTTCT GATTACCGTCACTGAAATAATTGATATTCTTTACTTTGCTTAGACCAAAACTTGTTTCTGTCTAGATATACTGCTAAATG TCACTAACTCACTATAAAGACCAATGATTTTTCTTTTGTTTGACAGGCAGTATTATTGGAGCGTCCTCGTGTTGTATCCG CAAACGTAGGGCATGCTTGGGATCTGCCAGCGAACACATTTGGTGCTGCCTATGCTAGATTCATGGGATCCAGGAACTTC TCACCAGATGATCGACCTCCTGTACGGTTCATGGACACAGATGAGCTGGCCTATGTTGCCATGCGGGCTCGTGAAGTGCA TGACTTCTGGCATACCCTTTTTGACCTACCTACTAACTTGATTGGGGAGTCAGCACTGAAGGTAATCGAGTTTGAGCAGA TGTACCTTCCTATGTGCATGCTGTCTGTTGTAGGAGGCACAGCAAGATTCAGCGAAAAGCAAAGAAAGTTGTTCTATCAG CACTACTTCCCCTGGGCCGTTCGTGCTGGCATGCAGTGCACTGATCTCATGTGTGTATATTATGAACGACATTTTGATGA AGATCTGGAAGATGTTCGTAGAAAATTGCAAATTATTCCAGCTCCTGCTGTTCCTTAATTGCATGTCCTGATAAGTTTTT TTATGTTTTTTGGACAATAGCAGTGAAATTTTTCAGTAAGATTTAGTGCACAAATTTTGTTTCTGATATAAAGTCAGTGA GCTTTGTATAGGTTGGATTTTATCAATGATTGTATACCACGATCAATAAAATAGACTCACCATCACAGGTTTTGGTGTAT GCTAGACTAAACTAAACCTGCCCTTAACTATTTAAAATTAGCATAGATGAGATTTTATTGCATTTGGGAAAATTGATCGC TTTTGGTTTATCTTGGTGAATTAAACTTGTTTGTATCATGAGATATTTGGTTGTTT
CDS sequence (LotjaGi1g1v0718100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTAGTAGGAGGTGGGAGAATCCGGCTGAACACATGGCAGCAGGCGGCGGTGGCGGTGGGCTCGGCGGTGGGTGCGTT GTTGGACCCTCGGAGAGCGGATTTGATAGCCGCTCTTGGTGAGACTACTGGAAAGCCTGCATTTGAGAGGGTTCTTCAGA GGATGAAGAGTTGCCCTGAAGGGAGGGCAGTATTATTGGAGCGTCCTCGTGTTGTATCCGCAAACGTAGGGCATGCTTGG GATCTGCCAGCGAACACATTTGGTGCTGCCTATGCTAGATTCATGGGATCCAGGAACTTCTCACCAGATGATCGACCTCC TGTACGGTTCATGGACACAGATGAGCTGGCCTATGTTGCCATGCGGGCTCGTGAAGTGCATGACTTCTGGCATACCCTTT TTGACCTACCTACTAACTTGATTGGGGAGTCAGCACTGAAGGTAATCGAGTTTGAGCAGATGTACCTTCCTATGTGCATG CTGTCTGTTGTAGGAGGCACAGCAAGATTCAGCGAAAAGCAAAGAAAGTTGTTCTATCAGCACTACTTCCCCTGGGCCGT TCGTGCTGGCATGCAGTGCACTGATCTCATGTGTGTATATTATGAACGACATTTTGATGAAGATCTGGAAGATGTTCGTA GAAAATTGCAAATTATTCCAGCTCCTGCTGTTCCTTAA
Protein sequence (LotjaGi1g1v0718100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVVGGGRIRLNTWQQAAVAVGSAVGALLDPRRADLIAALGETTGKPAFERVLQRMKSCPEGRAVLLERPRVVSANVGHAW DLPANTFGAAYARFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFDLPTNLIGESALKVIEFEQMYLPMCM LSVVGGTARFSEKQRKLFYQHYFPWAVRAGMQCTDLMCVYYERHFDEDLEDVRRKLQIIPAPAVP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Hamap | 1 | 221 | 221 | 32.313 | ||
| PANTHER | 6 | 223 | 218 | 3.9E-104 | ||
| PANTHER | 6 | 223 | 218 | 3.9E-104 | ||
| Pfam | 7 | 222 | 216 | 8.1E-83 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Mitochondrial inner membrane | The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae. | ||
| Biological process | Ubiquinone biosynthetic process | The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme. |
Expression pattern of LotjaGi1g1v0718100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…