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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0725100 |
| Transcript ID | LotjaGi1g1v0725100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | rho GTPase-activating gacO-like protein; TAIR: AT3G57930.1 rho GTPase-activating gacO-like protein; Swiss-Prot: sp|B9G3M6|KN7I_ORYSJ Kinesin-like protein KIN-7I; TrEMBL-Plants: tr|I3T2T5|I3T2T5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0725100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:129611772..129614096) extracted from Lotus japonicus Gifu genome v1.2.
ATAAAATCTGCTGAACTCTAGCTAGCTATCTTCCACTTTTCTATATTTGCATCTCACTTCCGCTCCAATTCACTTCTGTC TTTGGTTTGGTTGCTGCTCTCTCTAACCTAGTTCTCCATGTTCCACTCATCAAGTTTCAATCTTTAAGTCATAAATGTCT TCATTCACATCACTTCTCTGATCTGGCTCTTCAGTTTCCCATACCCAGATCAAAATTTTGATCATTTTGTCTCCCCTGTT GTGCTTAAACTTCATGCCATTCACATAAAAACCAGTACTTTCATTTGGGTATACACAGTTTCTGGATTTTTGTGAAATGG GTTGTGTTTGATATGCACAAAGTTGATTCAGGATACAAGGTCAGCTTCATTTCTCTTCTGTGTTTTTTGTGCTTCATCAG TCTCAATACTTCTGATAATCTTATTGCTATTTTGCTAACTTTTTGTATTTCTGATACTTGTCTTCATCTATTTTGTTACT TGTCAGTGATTTGAATTCTTTTTTTGTTATAGATTTCTCATTGTTTAGGACCTGAGGAATCGATGATGTGCACTTACATT GAGCTTGTACTAGATCGAACATGCGCATGAACAAAATCATAATATCTGTGTTTATATACTGCTTGTTTGGTTTCTTGGTA TTCAAATCGAGTGATATTATATTTTGGGTTTCTGTCTTAGTGTCTCTAAACCATTGCCAAAAAAATGAAGCTGGCTTCAT TTGTTTTGTTTAGGATTAGGTGATTTGTGATCTGGTTCTGAATGTTGAATTGTTGATAAGGAGAAGGATTTGAAATGAGA TGTAATTTTTTCACAGGTAGTGATTTTCTGAGGGAAAATGGAGATGACTTGGACCTTTGATTGGTTTCTCTGAATTTCAG AATCCAAGGCTTTTGCATCAATGCATGTGTTGATAACTTGGTCCTTAGATTGGTTTCTTTGAATTTCAGAATTCAATGCT TGTGCATCAGTGCATGTGTTGTTTCTGATTAATAATATTGACCACTGGAACCACACCATCCAATGATTTTTCTGATGATG TTTAAGTCTTTTTATATTGTCCATTTGAAAGACAGAGCATATGTAATGTAACAATATATCTTAGTCCTTGCTTTTGGCTC ACATCAGAATCTTGATTAATGTATTTATGCAGGTGACTTTAAAAATCAATAATTGTACTGCACACTTGATCTTGGTTCCC TTTGATTTAATAAACAAATTATAGGTCATAGGTGCAAGTGATACTTAAAAAAGAAAAATTGCATTTTGGAAGAAGTTGTT TGCAACTTGTATTTCAAAATAGATCTGCATTTTTAACTAGCATCTTATAAACCTCATGGTTTGCTTCAGTTTGACATCTT TCATTGTCATTTAGTTATTTTCTCTTCATATGGTCTTTTAACGTCAAAGTATAATTGTTTTGTCCGCGCAGATTTCCTGT TGAGACTTGAGATATTTAGTACTTTTCTGTCAGCAAGCTTCTTGAGCTATGGGTAGAGGGAGAGGAAAGGCAAAGAAGCA ATCTGTTATTGCTGAGGTTCCTGGAAGTGGTGAAGAGGAAAAAGTCCCACCTTACAGAGGAAGAGGAAGACCGGTAAAGC CGCTGACAGAAGAAATTGAAGAAGTAGAAGTAACTGAAAAGGTAGAGAAAGATGAGGAGAATGTACAAGGTAATGTTTCC AGCAATGATTTGAAAACTCAAGTTATCACAGTAAATAAGAGAAAAAGGAAGAGGTCTGCACAAGTTAAAGAGAAGACAGA TCCAATGAAAGAGGACAATGGCGTCCGTGCGAAGTTAAGCGCTGATGAATCAGTTAAGTCCACTGGATTCCGACAGAATG GGAGCAGGCGTAAGAGCAAGCCTCGCCGCGCTGCTGAAGCTGGAGTAGATTGCAAGTGAGCAAGTTTGTCATGATAGTTT TTATGCTCTTGAGATTGTTGGAACTTTGTCATCACTACAGAGGGTTCGCTTGGTTATATAAGGCTTGTTATGGTTGCTTA TTGTTATTCCTTTTGATTTTGTAACACTTTCATATGCTGTTTCTATAAAATGGCTTATTTTAATTTTGAGGATTCATATA TACTATGCTTTTAAAATGTTCTATAGAGATACTTTCCCGAAAAGAAACTACGGAATTTTGTAGATATTCTTTTGTCATTC ATGAGTTGTTTAAGTTCATTTCCCTTTTTTCTCAGTGTCTGATGATATATTTGTTTACTTTACATGCATGTCTGTGATGT AAAGAGATCGAACTCATGCAATTCTAGAATGGGGAAAATTAATGGTTTCTATACAGAAGCCTTTATTTAAGGGATTACAT TCCAG
CDS sequence (LotjaGi1g1v0725100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTAGAGGGAGAGGAAAGGCAAAGAAGCAATCTGTTATTGCTGAGGTTCCTGGAAGTGGTGAAGAGGAAAAAGTCCC ACCTTACAGAGGAAGAGGAAGACCGGTAAAGCCGCTGACAGAAGAAATTGAAGAAGTAGAAGTAACTGAAAAGGTAGAGA AAGATGAGGAGAATGTACAAGGTAATGTTTCCAGCAATGATTTGAAAACTCAAGTTATCACAGTAAATAAGAGAAAAAGG AAGAGGTCTGCACAAGTTAAAGAGAAGACAGATCCAATGAAAGAGGACAATGGCGTCCGTGCGAAGTTAAGCGCTGATGA ATCAGTTAAGTCCACTGGATTCCGACAGAATGGGAGCAGGCGTAAGAGCAAGCCTCGCCGCGCTGCTGAAGCTGGAGTAG ATTGCAAGTGA
Protein sequence (LotjaGi1g1v0725100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRGRGKAKKQSVIAEVPGSGEEEKVPPYRGRGRPVKPLTEEIEEVEVTEKVEKDEENVQGNVSSNDLKTQVITVNKRKR KRSAQVKEKTDPMKEDNGVRAKLSADESVKSTGFRQNGSRRKSKPRRAAEAGVDCK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 136 | 136 | 9.1E-57 | – | |
| MobiDBLite | 1 | 136 | 136 | - | – | |
| PANTHER | 1 | 136 | 136 | 9.1E-57 | – | |
| MobiDBLite | 23 | 60 | 38 | - | – | |
| MobiDBLite | 85 | 103 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0725100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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