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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0739500 |
| Transcript ID | LotjaGi1g1v0739500.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | polyketide cyclase/dehydrase/lipid transport superfamily protein; TAIR: AT5G06440.2 polyketide cyclase/dehydrase/lipid transport superfamily protein; Swiss-Prot: sp|K7VLR4|APT1_MAIZE Protein ABERRANT POLLEN TRANSMISSION 1; TrEMBL-Plants: tr|K7KG54|K7KG54_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0739500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:131352378..131358282) extracted from Lotus japonicus Gifu genome v1.2.
TTTCTTTGGTGGTCCCGGAGAACTAAATCTCTGACTCTGACGCTTTCAAACTTTGCAGTCCCATGCTTAAAAGTCAAATT TTTTTACCCAAAAGGATCACATTTTTATATTAATCAAACACTACCAATAACAATAACAATTAAAAATTAACAATAGCTTG GTTTGGTTGTTCTTCAATATTGCTTTGGGGTTCTACTACATCAGGTGGCTGTGTCCCCTCTTTGTAGACTGAGATCTGCA TTCTTGGGTATGTGGAAAATTTTCAGCTTTTTCTTATTGTTAACACCCCAATTGAGCTTCTGAAATTTTCATGTAAGTGG GATTTTGGTGAAGTTTATAGCTTTAATTGAATTGGATATATCACATCATCATCACATCAGTGCCTCCGTTTTAGTTATGG ATTGAATTTCTTCATCTTCCTTAAGTTTGGTTTTAATTTTGGTTTGTTCACGTGGTCTCATTAAATTCTGGTATGTGTCT TACATGGGTTGGGGCTTAGCTGTGGTAGTTGTCCTTCCCTGAACAGATTCTGTAAAACAAGTGGTTAAGAAATTTCAAGA TTTTTTTTTTTGTAATTTCATTTATTGCAGCTCAGAAGCTTCAAGTTGGTGTCTTGCAGATTTTGTACTGGCCATTTAAT GATGACTTTCTAGGCATTTCTTATTTTAGTTAACAATAGTTGGGCCACAGTGGAGAGAAAAGTTTTCTGGCAAATAACGT GACAAGTGCGATTTTTCTTCTGCTTTGTACACTTACAATTCAGGTGGTAAATTCAGTGAAAAGTGGTACTTTTCTTCTGC TTTGTACGCTTACAATTCAGGTATCAATTGTGCTTGGTAGTCTTGTTTTTACCTAGAGTGGATGATTTATATGATTATGG AGAATATTTGCAGTACTTTCTGATGGAGGGCTTGTTCTTCTTTCCTTAGAGATACATTGATGGCGAAAAAGAGACATATT GTGCAGTATAGGGAGAGGTTGGACAGGACCCTTGCTTCCCCTGATCTCACAAATGGCGAGATGCTCAAAACGCTTGTCAA AAGTCAACTACTACGTTCTTCACAATTTGAAATTGAAGGTAATTAGATTAATAGGTCCCTAATTTGCTTTGATCTCACTT AAGCTGAGATGGTACTAGCTAACTGGAATTATTATTTTAGGTACTTCAGTTTGTATTTTTTTTTTAAGTTTTATGTTTGA ATTTGTAGGTTATGAAGATAAATTTGTAGAAACCAAAACTGCAGAGATAACAAACTTTCTTGATATGATAAGTGCTTCTG TAGATAATAGTGGAGGATCTAGTATATCACACACTGATTGGAAGGTATGATATCTACTTTGGCTGTGTCTGGATATATGT TTTTGCGCTGATATTTGCACGCACTTTAACATAAACAGTGAACATAACTCTTATGAAAGTACGCTCACATTGCATTCAAC TGTATCCAAACATTCAGCCATGTCATATTTCTTGACATTTTATTGCCCTATGTAGATTATCCTCCACTGATTTGGATCTT AAACTTTTTGTTTTGCTTTATTTATCCAATTATTGACTTCCTTTAAGAAAAATATGTGAGTTTACTTTAGCTGATTGACC TCTTGCTTCAGTGGTTTATCCTTTTTTTAGAATCCGATTGAGCTAATGCAATCTTGTGTAACATTTTGTATACTGAATTC TGATCATGCTTTCTGTAATAGATACATGACTTTTACTATCAAATTCTTGAGGAATTTTGATAATTTTACTTCTTTCAACA GTTAAAACAGGATAATGAAGATTACCGTGTTATGTATCGTGAAGGACCAGAGGGAACTCCCTTTCATACATTGATGGTTG AAGGCTATATAGATGGGCCTGTTGATGTTTGTGAGTCACGTTAGATCAGCCAATTTTTTTTGGCATCACCTTTATAAGTT TAACAACAAAGGCCATATTGTTATGTTTAACATGTGAAGTTTTAATGAGTTATTTTCTTCATTACAGGTTTATGCCTCTC ATGGGAGGCACCCCTTTACAAGAAATGGTGAGAATCACAGTGCAAAATGTGCTTTCAATTTTCTGTATATTTGTCTCTTA ATGACACTGTACACTAGTGTCATTTTTTCACACATGAATTTCTATGTATGAATGGAGTTGCAACAATTAATGAAAATTGC AGTTACAAGATATGTCTTCTGAACCATCTGACATTAATTTTGTTATGGGAAGGTGCTGCAAGTTTTTGTATAGCATTTAA ATTATTTAGAATCTATGTTGGGGGATCGACATAAAAATCTCATTGACAATTTTAGTATGTGTTTCATATTAACTCAAGTG ATTGCTAACGTTTGTTTGGACATGCATCAAAGAGTATCCAGACATAGCCTTAGTTGATAGTTTTTTTCACAAATTTCATT TTTCAGGTGGCCTCAGTTTACTGTTCCGCCTTTCAAAGTTTTAGCAGCTGATTGTTTGCAAAAGGTCCAGATTGGGGAAC AGATCTCACTAGTAAGGTTTGTTGCCAGCATCAATTACAGAATTTCTCTTTTAGTGTGACTCACCATGCTAAAAGCCTTC ACTGTTTATAGCATGTTTGGATGAGCTTCTGTTTCCTCAGAATCAATTCTGACATCCAGAAGCTACTCACAGAAGTTTCT TCCCAAAATTGATTTTTACTTTAGAATCAATTGTAGAAGTATTTTCAAACATAACTTAGTACTCATATTGTTTCAAATTT TGGAAGAAAGGATGAAGGTTCCGTGGCCGCTGTCAAAGAGGGAGGCTATAGTGCACTATTATCTGGTTGAGTACTTTCAA GAAGACTTGACAATTGTTCTCATAAAATCGGTAGTCACTTGGATCCTTTTCTCTTCCTTTTCTTCTTTTTGTAAAGAGAG CTAGTTATGATCTTCAGGAAATTTGTTTGTTTTGCTTTCAGGTCTCTGAGTCAGAGAGCATGGATGGGGCCATTGATGGT ATCAACAGAGATGCAATTCCTGAAGCAAAGGATGTTGTTAGAATTGACTTTGTGGGAGGTTATGTTTTGCAAAAGGTGAC CTCAGAAAGAAGTTACTTTCGGTGAGTTTTAAGTGAATACTGTAACATTAGAAGTATATTTTTAGTAATGGGCTAATTTA GAGGGTTGTGTTGTCCTCTACTTGTTAATCACTAAAATGTAAATTTCCAAACTCATTATTATCTATCCTGACATGACATT TATTAGACTAAGCAATCACTTATTGGTCAATTATGAGAGTGGACAATCCTTGGGAGTGCATGGAAAAGTTGTCCTTTAAG TTACTTAAAGGGGAAAATTGTCACCTGTTATAGACCATAAAACCCCATAGATCTGCTTAATTTTAAGAGGTGAAAAAGTT TGAAGAAGTTCCTGTATGTGACTGGATTTCATGTTGGGATATGGTTTTATTTGCGTATCAGATCCCGGTGAAGCTGGAAT TTTTCTCATAGATTTTGCAAATTAACTGAGTTACCTAAAGATAATATTTTTGTACTATGGGAAATCATGGCGAGTATTAT ATTGTCTTTATGATAGAGAGGGATCTCCATCTTTAAACTAAAAATAACTTCACTGATATTTGGTGCTCCAGACTTTTGGC TTTGCTAATGTTTCTATGAACAGTTAATCATACCTGGTTTAGTTGTTCTATCTACTTTACTTGTTTCCATTGATAACTTG TCTTATGTTTTCATTGTAAGTTACTCATTCATTTCTTAATTGATACTAAAAGAAATATGTAATTGAACTAGCTTTAGTTT ATAGTCTAATTATGTGGCTTGGCTTCCAAATGTGGTGAAAAATGAAGATACCAAACAGAAAAGGGATTTTGAATTTTGAT TAGCTGCCTATAAATTTGAAAAAAATTGTAGGACAATGGCAAATTTGGATATAAAGCTGGACTTTGTACCTCCAACCCTT ATAAATTTCATTTCAAGGCAACTCATCGGAAGCGGTTTCAGACTTTATCAGAAGGTTGTAGATTCTTTTCAGATATACTT TGATTAGGCACCCATCCAATATTTAAAACATCCTTTCATGGATATTTTGTAATTTCTTATATTGCCTTTTGATGCTGACC AACCCCTGAAATTGTTATAGGCTGTGTCCTCTATGATGAACAATGATAAAGAAATCATCAAGACCTTGGGTGACTCATTG TATGTTGGAATTCGAGAAGCTCTTTACAACACTAGTGGATCAAATGCTATGGATGGGGAAGAGCTTAACATAGTTTCTAG CATTCTTCCTGCTGAAGAACATGCTCAAAGCAAGCAAGATGGGACAAAACATGTATCTTGGGAGGATAGAGGCAACCAAT CTACGAGTAATTGCAATGGTGAGATTTTAGAGGCAGGTAATGGAGAGATTGTAGAAGAAGATAGTGAAGAGATTGTACAA ATTGCGGAGGATGTCAACAAAGTATTGAAGGGCAAGAGGAATGATAAGATTGTAGATGCAGATAATGAAGAGATTTCAGA AGCAGAGAATGAAGAGATTGTACAGATTGAAGAGGTTGTCAAGAAAGTACATGACATCACCATTGAGGAAGATAGTGCCA TGAATTTTCTGAAGAGAAAGAAGAATGTAAGCATAAACTCAGATGTAAAAAAGGCTCTAGAAACTCTAGAGAAGGCCATT TCAATGGTTCGCGAATATGGTTTTCATCCTCGCAGGCCTTCTTTTAGATTCGGGAATGAAGAGAGAAAAGATAGCACAGT TGAATCATATACTGCAAAACCTTCTCAGCTATCTTCAAAGGTTAGTGTTGAAGTATCAAGCAGCAATACACTGAATGAAA CTTTAGAAGAACCTGTGACTAACTCTGAAATCCAAAACATCAGGTGATTATGTTACCCTTAACAAAAGTTCTTTTTGTGT GATTTTGTATCCTTCCATATGGTGTGTTTGGAAATATAAGCCAACTAGTAAAGAATGCAGTTTAATTTTTAATTATGAAA TATATATTTAACTGATGCTCTTGTTTCTTTTTTTATCTTTTAGGCACACAGGAACAAATCCTAATTTAAAGGAAGTTAAC CATAACAAGGTTGTACCAGCTGCTTCACCAGAGCAGAATCTCCAAAGACTATTTGAAGAAAGCCGGGCTGATTCATTTTC TATGAAAAATGAGGCAACACTGAACCAGACAACAAGTGGTAGCAACCAATTAGACATTGATGCAATCCAAGATATGTCTT TAGATGACAAAAAAAAGTCAAGCAGGAAGAAAAATTATATATACTGTTGTTTTCTACGTTAGGCCAGTAACAGAAGAACA TTATGTATTTTGATGCCTTAAAGAGTTAATTTGATGTTTTAGAGCAATGTAAGTATGTGAAGGAGGTGTTAAGGGGTTAT AGGTATAAGTATGGGAAATTTTGAAATAAAAAAAATAAACAAGAACAATTAAATTTCCATTATTTATAAATTTTGGTTCC TCTTCTCTATCTTTCAAGCCCTCTCACTTTTGGATAGGAAGGAAGGATGTTGCCCCTTTATTTGTCCCTTTCTCCTCTCT AAATACTTGACCTAAGTGAAGTGTTCTTCTAGAAATGAGATTGTTCGGTTCTCCTTGTCTCCGGTGGTGGTGTGTGGCCT TGGTTGGCTGAGCTAGTGCGACGGACCTATGTTAACACAACGGAGGTGTACTTGCAGACGACACTCCGACGCCCAAGTCA ATGTGAGAGCAAAGAGAGAATCTCAAAGTCAAAGTCTATGAAGAACTCAAAGTATAGCACTATGAGCTAAAGTTATGTAA ATGAATAATTACACCTGTATTTATAGGCTTGGAGTCCATCATAACTATATCTTTGCAAGTTCTAAGGAAGCCTGCCTAAG GTCTTTCTGAGAGCAAATAACATTGTAATTGTAAATATTGCTATGAACTTGAAAAAATTAACCCC
CDS sequence (LotjaGi1g1v0739500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGTTCCGTGGCCGCTGTCAAAGAGGGAGGCTATAGTGCACTATTATCTGGTTGAGTACTTTCAAGAAGACTTGAC AATTGTTCTCATAAAATCGGTCTCTGAGTCAGAGAGCATGGATGGGGCCATTGATGGTATCAACAGAGATGCAATTCCTG AAGCAAAGGATGTTGTTAGAATTGACTTTGTGGGAGGTTATGTTTTGCAAAAGGTGACCTCAGAAAGAAGTTACTTTCGG ACAATGGCAAATTTGGATATAAAGCTGGACTTTGTACCTCCAACCCTTATAAATTTCATTTCAAGGCAACTCATCGGAAG CGGTTTCAGACTTTATCAGAAGGCTGTGTCCTCTATGATGAACAATGATAAAGAAATCATCAAGACCTTGGGTGACTCAT TGTATGTTGGAATTCGAGAAGCTCTTTACAACACTAGTGGATCAAATGCTATGGATGGGGAAGAGCTTAACATAGTTTCT AGCATTCTTCCTGCTGAAGAACATGCTCAAAGCAAGCAAGATGGGACAAAACATGTATCTTGGGAGGATAGAGGCAACCA ATCTACGAGTAATTGCAATGGTGAGATTTTAGAGGCAGGTAATGGAGAGATTGTAGAAGAAGATAGTGAAGAGATTGTAC AAATTGCGGAGGATGTCAACAAAGTATTGAAGGGCAAGAGGAATGATAAGATTGTAGATGCAGATAATGAAGAGATTTCA GAAGCAGAGAATGAAGAGATTGTACAGATTGAAGAGGTTGTCAAGAAAGTACATGACATCACCATTGAGGAAGATAGTGC CATGAATTTTCTGAAGAGAAAGAAGAATGTAAGCATAAACTCAGATGTAAAAAAGGCTCTAGAAACTCTAGAGAAGGCCA TTTCAATGGTTCGCGAATATGGTTTTCATCCTCGCAGGCCTTCTTTTAGATTCGGGAATGAAGAGAGAAAAGATAGCACA GTTGAATCATATACTGCAAAACCTTCTCAGCTATCTTCAAAGGTTAGTGTTGAAGTATCAAGCAGCAATACACTGAATGA AACTTTAGAAGAACCTGTGACTAACTCTGAAATCCAAAACATCAGGCACACAGGAACAAATCCTAATTTAAAGGAAGTTA ACCATAACAAGGTTGTACCAGCTGCTTCACCAGAGCAGAATCTCCAAAGACTATTTGAAGAAAGCCGGGCTGATTCATTT TCTATGAAAAATGAGGCAACACTGAACCAGACAACAAGTGGTAGCAACCAATTAGACATTGATGCAATCCAAGATATGTC TTTAGATGACAAAAAAAAGTCAAGCAGGAAGAAAAATTATATATACTGTTGTTTTCTACGTTAG
Protein sequence (LotjaGi1g1v0739500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKVPWPLSKREAIVHYYLVEYFQEDLTIVLIKSVSESESMDGAIDGINRDAIPEAKDVVRIDFVGGYVLQKVTSERSYFR TMANLDIKLDFVPPTLINFISRQLIGSGFRLYQKAVSSMMNNDKEIIKTLGDSLYVGIREALYNTSGSNAMDGEELNIVS SILPAEEHAQSKQDGTKHVSWEDRGNQSTSNCNGEILEAGNGEIVEEDSEEIVQIAEDVNKVLKGKRNDKIVDADNEEIS EAENEEIVQIEEVVKKVHDITIEEDSAMNFLKRKKNVSINSDVKKALETLEKAISMVREYGFHPRRPSFRFGNEERKDST VESYTAKPSQLSSKVSVEVSSSNTLNETLEEPVTNSEIQNIRHTGTNPNLKEVNHNKVVPAASPEQNLQRLFEESRADSF SMKNEATLNQTTSGSNQLDIDAIQDMSLDDKKKSSRKKNYIYCCFLR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 446 | 446 | 2.7E-172 | – | |
| SUPERFAMILY | 1 | 116 | 116 | 2.11E-8 | – | |
| PANTHER | 1 | 446 | 446 | 2.7E-172 | – | |
| MobiDBLite | 175 | 194 | 20 | - | – | |
| MobiDBLite | 305 | 322 | 18 | - | – | |
| MobiDBLite | 305 | 373 | 69 | - | – | |
| MobiDBLite | 323 | 373 | 51 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0739500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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