Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0739500 |
| Transcript ID | LotjaGi1g1v0739500.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | polyketide cyclase/dehydrase/lipid transport superfamily protein; TAIR: AT5G06440.2 polyketide cyclase/dehydrase/lipid transport superfamily protein; Swiss-Prot: sp|K7VLR4|APT1_MAIZE Protein ABERRANT POLLEN TRANSMISSION 1; TrEMBL-Plants: tr|K7KG54|K7KG54_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0739500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:131352414..131358332) extracted from Lotus japonicus Gifu genome v1.2.
CTGACGCTTTCAAACTTTGCAGTCCCATGCTTAAAAGTCAAATTTTTTTACCCAAAAGGATCACATTTTTATATTAATCA AACACTACCAATAACAATAACAATTAAAAATTAACAATAGCTTGGTTTGGTTGTTCTTCAATATTGCTTTGGGGTTCTAC TACATCAGGTGGCTGTGTCCCCTCTTTGTAGACTGAGATCTGCATTCTTGGGTATGTGGAAAATTTTCAGCTTTTTCTTA TTGTTAACACCCCAATTGAGCTTCTGAAATTTTCATGTAAGTGGGATTTTGGTGAAGTTTATAGCTTTAATTGAATTGGA TATATCACATCATCATCACATCAGTGCCTCCGTTTTAGTTATGGATTGAATTTCTTCATCTTCCTTAAGTTTGGTTTTAA TTTTGGTTTGTTCACGTGGTCTCATTAAATTCTGGTATGTGTCTTACATGGGTTGGGGCTTAGCTGTGGTAGTTGTCCTT CCCTGAACAGATTCTGTAAAACAAGTGGTTAAGAAATTTCAAGATTTTTTTTTTTGTAATTTCATTTATTGCAGCTCAGA AGCTTCAAGTTGGTGTCTTGCAGATTTTGTACTGGCCATTTAATGATGACTTTCTAGGCATTTCTTATTTTAGTTAACAA TAGTTGGGCCACAGTGGAGAGAAAAGTTTTCTGGCAAATAACGTGACAAGTGCGATTTTTCTTCTGCTTTGTACACTTAC AATTCAGGTGGTAAATTCAGTGAAAAGTGGTACTTTTCTTCTGCTTTGTACGCTTACAATTCAGGTATCAATTGTGCTTG GTAGTCTTGTTTTTACCTAGAGTGGATGATTTATATGATTATGGAGAATATTTGCAGTACTTTCTGATGGAGGGCTTGTT CTTCTTTCCTTAGAGATACATTGATGGCGAAAAAGAGACATATTGTGCAGTATAGGGAGAGGTTGGACAGGACCCTTGCT TCCCCTGATCTCACAAATGGCGAGATGCTCAAAACGCTTGTCAAAAGTCAACTACTACGTTCTTCACAATTTGAAATTGA AGGTAATTAGATTAATAGGTCCCTAATTTGCTTTGATCTCACTTAAGCTGAGATGGTACTAGCTAACTGGAATTATTATT TTAGGTACTTCAGTTTGTATTTTTTTTTTAAGTTTTATGTTTGAATTTGTAGGTTATGAAGATAAATTTGTAGAAACCAA AACTGCAGAGATAACAAACTTTCTTGATATGATAAGTGCTTCTGTAGATAATAGTGGAGGATCTAGTATATCACACACTG ATTGGAAGGTATGATATCTACTTTGGCTGTGTCTGGATATATGTTTTTGCGCTGATATTTGCACGCACTTTAACATAAAC AGTGAACATAACTCTTATGAAAGTACGCTCACATTGCATTCAACTGTATCCAAACATTCAGCCATGTCATATTTCTTGAC ATTTTATTGCCCTATGTAGATTATCCTCCACTGATTTGGATCTTAAACTTTTTGTTTTGCTTTATTTATCCAATTATTGA CTTCCTTTAAGAAAAATATGTGAGTTTACTTTAGCTGATTGACCTCTTGCTTCAGTGGTTTATCCTTTTTTTAGAATCCG ATTGAGCTAATGCAATCTTGTGTAACATTTTGTATACTGAATTCTGATCATGCTTTCTGTAATAGATACATGACTTTTAC TATCAAATTCTTGAGGAATTTTGATAATTTTACTTCTTTCAACAGTTAAAACAGGATAATGAAGATTACCGTGTTATGTA TCGTGAAGGACCAGAGGGAACTCCCTTTCATACATTGATGGTTGAAGGCTATATAGATGGGCCTGTTGATGTTTGTGAGT CACGTTAGATCAGCCAATTTTTTTTGGCATCACCTTTATAAGTTTAACAACAAAGGCCATATTGTTATGTTTAACATGTG AAGTTTTAATGAGTTATTTTCTTCATTACAGGTTTATGCCTCTCATGGGAGGCACCCCTTTACAAGAAATGGTGAGAATC ACAGTGCAAAATGTGCTTTCAATTTTCTGTATATTTGTCTCTTAATGACACTGTACACTAGTGTCATTTTTTCACACATG AATTTCTATGTATGAATGGAGTTGCAACAATTAATGAAAATTGCAGTTACAAGATATGTCTTCTGAACCATCTGACATTA ATTTTGTTATGGGAAGGTGCTGCAAGTTTTTGTATAGCATTTAAATTATTTAGAATCTATGTTGGGGGATCGACATAAAA ATCTCATTGACAATTTTAGTATGTGTTTCATATTAACTCAAGTGATTGCTAACGTTTGTTTGGACATGCATCAAAGAGTA TCCAGACATAGCCTTAGTTGATAGTTTTTTTCACAAATTTCATTTTTCAGGTGGCCTCAGTTTACTGTTCCGCCTTTCAA AGTTTTAGCAGCTGATTGTTTGCAAAAGGTCCAGATTGGGGAACAGATCTCACTAGTAAGGTTTGTTGCCAGCATCAATT ACAGAATTTCTCTTTTAGTGTGACTCACCATGCTAAAAGCCTTCACTGTTTATAGCATGTTTGGATGAGCTTCTGTTTCC TCAGAATCAATTCTGACATCCAGAAGCTACTCACAGAAGTTTCTTCCCAAAATTGATTTTTACTTTAGAATCAATTGTAG AAGTATTTTCAAACATAACTTAGTACTCATATTGTTTCAAATTTTGGAAGAAAGGATGAAGGTTCCGTGGCCGCTGTCAA AGAGGGAGGCTATAGTGCACTATTATCTGGTTGAGTACTTTCAAGAAGACTTGACAATTGTTCTCATAAAATCGGTAGTC ACTTGGATCCTTTTCTCTTCCTTTTCTTCTTTTTGTAAAGAGAGCTAGTTATGATCTTCAGGAAATTTGTTTGTTTTGCT TTCAGGTCTCTGAGTCAGAGAGCATGGATGGGGCCATTGATGGTATCAACAGAGATGCAATTCCTGAAGCAAAGGATGTT GTTAGAATTGACTTTGTGGGAGGTTATGTTTTGCAAAAGGTGACCTCAGAAAGAAGTTACTTTCGGTGAGTTTTAAGTGA ATACTGTAACATTAGAAGTATATTTTTAGTAATGGGCTAATTTAGAGGGTTGTGTTGTCCTCTACTTGTTAATCACTAAA ATGTAAATTTCCAAACTCATTATTATCTATCCTGACATGACATTTATTAGACTAAGCAATCACTTATTGGTCAATTATGA GAGTGGACAATCCTTGGGAGTGCATGGAAAAGTTGTCCTTTAAGTTACTTAAAGGGGAAAATTGTCACCTGTTATAGACC ATAAAACCCCATAGATCTGCTTAATTTTAAGAGGTGAAAAAGTTTGAAGAAGTTCCTGTATGTGACTGGATTTCATGTTG GGATATGGTTTTATTTGCGTATCAGATCCCGGTGAAGCTGGAATTTTTCTCATAGATTTTGCAAATTAACTGAGTTACCT AAAGATAATATTTTTGTACTATGGGAAATCATGGCGAGTATTATATTGTCTTTATGATAGAGAGGGATCTCCATCTTTAA ACTAAAAATAACTTCACTGATATTTGGTGCTCCAGACTTTTGGCTTTGCTAATGTTTCTATGAACAGTTAATCATACCTG GTTTAGTTGTTCTATCTACTTTACTTGTTTCCATTGATAACTTGTCTTATGTTTTCATTGTAAGTTACTCATTCATTTCT TAATTGATACTAAAAGAAATATGTAATTGAACTAGCTTTAGTTTATAGTCTAATTATGTGGCTTGGCTTCCAAATGTGGT GAAAAATGAAGATACCAAACAGAAAAGGGATTTTGAATTTTGATTAGCTGCCTATAAATTTGAAAAAAATTGTAGGACAA TGGCAAATTTGGATATAAAGCTGGACTTTGTACCTCCAACCCTTATAAATTTCATTTCAAGGCAACTCATCGGAAGCGGT TTCAGACTTTATCAGAAGGTTGTAGATTCTTTTCAGATATACTTTGATTAGGCACCCATCCAATATTTAAAACATCCTTT CATGGATATTTTGTAATTTCTTATATTGCCTTTTGATGCTGACCAACCCCTGAAATTGTTATAGGCTGTGTCCTCTATGA TGAACAATGATAAAGAAATCATCAAGACCTTGGGTGACTCATTGTATGTTGGAATTCGAGAAGCTCTTTACAACACTAGT GGATCAAATGCTATGGATGGGGAAGAGCTTAACATAGTTTCTAGCATTCTTCCTGCTGAAGAACATGCTCAAAGCAAGCA AGATGGGACAAAACATGTATCTTGGGAGGATAGAGGCAACCAATCTACGAGTAATTGCAATGGTGAGATTTTAGAGGCAG GTAATGGAGAGATTGTAGAAGAAGATAGTGAAGAGATTGTACAAATTGCGGAGGATGTCAACAAAGTATTGAAGGGCAAG AGGAATGATAAGATTGTAGATGCAGATAATGAAGAGATTTCAGAAGCAGAGAATGAAGAGATTGTACAGATTGAAGAGGT TGTCAAGAAAGTACATGACATCACCATTGAGGAAGATAGTGCCATGAATTTTCTGAAGAGAAAGAAGAATGTAAGCATAA ACTCAGATGTAAAAAAGGCTCTAGAAACTCTAGAGAAGGCCATTTCAATGGTTCGCGAATATGGTTTTCATCCTCGCAGG CCTTCTTTTAGATTCGGGAATGAAGAGAGAAAAGATAGCACAGTTGAATCATATACTGCAAAACCTTCTCAGCTATCTTC AAAGGTTAGTGTTGAAGTATCAAGCAGCAATACACTGAATGAAACTTTAGAAGAACCTGTGACTAACTCTGAAATCCAAA ACATCAGGTGATTATGTTACCCTTAACAAAAGTTCTTTTTGTGTGATTTTGTATCCTTCCATATGGTGTGTTTGGAAATA TAAGCCAACTAGTAAAGAATGCAGTTTAATTTTTAATTATGAAATATATATTTAACTGATGCTCTTGTTTCTTTTTTTAT CTTTTAGGCACACAGGAACAAATCCTAATTTAAAGGAAGTTAACCATAACAAGGTTGTACCAGCTGCTTCACCAGAGCAG AATCTCCAAAGACTATTTGAAGAAAGCCGGGCTGATTCATTTTCTATGAAAAATGAGGCAACACTGAACCAGACAACAAG TGGTAGCAACCAATTAGACATTGATGCAATCCAAGATATGTCTTTAGATGACAAAAAAAAGTCAAGCAGGAAGAAAAATT ATATATACTGTTGTTTTCTACGTTAGGCCAGTAACAGAAGAACATTATGTATTTTGATGCCTTAAAGAGTTAATTTGATG TTTTAGAGCAATGTAAGTATGTGAAGGAGGTGTTAAGGGGTTATAGGTATAAGTATGGGAAATTTTGAAATAAAAAAAAT AAACAAGAACAATTAAATTTCCATTATTTATAAATTTTGGTTCCTCTTCTCTATCTTTCAAGCCCTCTCACTTTTGGATA GGAAGGAAGGATGTTGCCCCTTTATTTGTCCCTTTCTCCTCTCTAAATACTTGACCTAAGTGAAGTGTTCTTCTAGAAAT GAGATTGTTCGGTTCTCCTTGTCTCCGGTGGTGGTGTGTGGCCTTGGTTGGCTGAGCTAGTGCGACGGACCTATGTTAAC ACAACGGAGGTGTACTTGCAGACGACACTCCGACGCCCAAGTCAATGTGAGAGCAAAGAGAGAATCTCAAAGTCAAAGTC TATGAAGAACTCAAAGTATAGCACTATGAGCTAAAGTTATGTAAATGAATAATTACACCTGTATTTATAGGCTTGGAGTC CATCATAACTATATCTTTGCAAGTTCTAAGGAAGCCTGCCTAAGGTCTTTCTGAGAGCAAATAACATTGTAATTGTAAAT ATTGCTATGAACTTGAAAAAATTAACCCCTTTGGAATTTACAAATAACATTTGTAATATAAATTTTCATACTTTAATTT
CDS sequence (LotjaGi1g1v0739500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGTTCCGTGGCCGCTGTCAAAGAGGGAGGCTATAGTGCACTATTATCTGGTTGAGTACTTTCAAGAAGACTTGAC AATTGTTCTCATAAAATCGGTCTCTGAGTCAGAGAGCATGGATGGGGCCATTGATGGTATCAACAGAGATGCAATTCCTG AAGCAAAGGATGTTGTTAGAATTGACTTTGTGGGAGGTTATGTTTTGCAAAAGGTGACCTCAGAAAGAAGTTACTTTCGG ACAATGGCAAATTTGGATATAAAGCTGGACTTTGTACCTCCAACCCTTATAAATTTCATTTCAAGGCAACTCATCGGAAG CGGTTTCAGACTTTATCAGAAGGCTGTGTCCTCTATGATGAACAATGATAAAGAAATCATCAAGACCTTGGGTGACTCAT TGTATGTTGGAATTCGAGAAGCTCTTTACAACACTAGTGGATCAAATGCTATGGATGGGGAAGAGCTTAACATAGTTTCT AGCATTCTTCCTGCTGAAGAACATGCTCAAAGCAAGCAAGATGGGACAAAACATGTATCTTGGGAGGATAGAGGCAACCA ATCTACGAGTAATTGCAATGGTGAGATTTTAGAGGCAGGTAATGGAGAGATTGTAGAAGAAGATAGTGAAGAGATTGTAC AAATTGCGGAGGATGTCAACAAAGTATTGAAGGGCAAGAGGAATGATAAGATTGTAGATGCAGATAATGAAGAGATTTCA GAAGCAGAGAATGAAGAGATTGTACAGATTGAAGAGGTTGTCAAGAAAGTACATGACATCACCATTGAGGAAGATAGTGC CATGAATTTTCTGAAGAGAAAGAAGAATGTAAGCATAAACTCAGATGTAAAAAAGGCTCTAGAAACTCTAGAGAAGGCCA TTTCAATGGTTCGCGAATATGGTTTTCATCCTCGCAGGCCTTCTTTTAGATTCGGGAATGAAGAGAGAAAAGATAGCACA GTTGAATCATATACTGCAAAACCTTCTCAGCTATCTTCAAAGGTTAGTGTTGAAGTATCAAGCAGCAATACACTGAATGA AACTTTAGAAGAACCTGTGACTAACTCTGAAATCCAAAACATCAGGCACACAGGAACAAATCCTAATTTAAAGGAAGTTA ACCATAACAAGGTTGTACCAGCTGCTTCACCAGAGCAGAATCTCCAAAGACTATTTGAAGAAAGCCGGGCTGATTCATTT TCTATGAAAAATGAGGCAACACTGAACCAGACAACAAGTGGTAGCAACCAATTAGACATTGATGCAATCCAAGATATGTC TTTAGATGACAAAAAAAAGTCAAGCAGGAAGAAAAATTATATATACTGTTGTTTTCTACGTTAG
Protein sequence (LotjaGi1g1v0739500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKVPWPLSKREAIVHYYLVEYFQEDLTIVLIKSVSESESMDGAIDGINRDAIPEAKDVVRIDFVGGYVLQKVTSERSYFR TMANLDIKLDFVPPTLINFISRQLIGSGFRLYQKAVSSMMNNDKEIIKTLGDSLYVGIREALYNTSGSNAMDGEELNIVS SILPAEEHAQSKQDGTKHVSWEDRGNQSTSNCNGEILEAGNGEIVEEDSEEIVQIAEDVNKVLKGKRNDKIVDADNEEIS EAENEEIVQIEEVVKKVHDITIEEDSAMNFLKRKKNVSINSDVKKALETLEKAISMVREYGFHPRRPSFRFGNEERKDST VESYTAKPSQLSSKVSVEVSSSNTLNETLEEPVTNSEIQNIRHTGTNPNLKEVNHNKVVPAASPEQNLQRLFEESRADSF SMKNEATLNQTTSGSNQLDIDAIQDMSLDDKKKSSRKKNYIYCCFLR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 446 | 446 | 2.7E-172 | – | |
| SUPERFAMILY | 1 | 116 | 116 | 2.11E-8 | – | |
| PANTHER | 1 | 446 | 446 | 2.7E-172 | – | |
| MobiDBLite | 175 | 194 | 20 | - | – | |
| MobiDBLite | 305 | 322 | 18 | - | – | |
| MobiDBLite | 305 | 373 | 69 | - | – | |
| MobiDBLite | 323 | 373 | 51 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0739500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…