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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0754700 |
| Transcript ID | LotjaGi1g1v0754700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NEFA-interacting nuclear protein NIP30, putative; TAIR: AT3G62140.1 NEFA-interacting nuclear protein; Swiss-Prot: sp|Q91WE2|F192A_MOUSE Protein FAM192A; TrEMBL-Plants: tr|I3S6E8|I3S6E8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0754700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:132774713..132783949) extracted from Lotus japonicus Gifu genome v1.2.
ACAATACCATATTTTTTTTTAGATAAGCGTCACAATACCATATGATATGCATCCTAATCCTAGCTGAAAACATGTTAAAC CAAATTTCTTTTACAACCTTTTTTTTCTACTCCAATCACCCCTTTCAGTGTATAAAATTAATTTATAAAACACAATTATT ACCAGAAACTTGTTTTTGATGGTATAAGTGGAAAAAAAGGGTGCCAAAATAAAATCTGCCCACAAGAAACACGAGTAACC CACCGATAAACAAAGCCTTCACAAATCTTTGAAGACAAAAAAAGTTTCTGGGAACTCAAGTTTTAGGCGCAATTGCAATT GCAGACAGTTCGCAAATCTTGAAGCCATGGACAATGATGATACGGATCTTCCTATCAGGATTATGAACTTTGTCTCTGAA GACCAAGTAAATTAACTCCCTCACTCTCAATCTCAATCTCAATCTCAATCTCAATCTCATACTCCTATTCCTGAAAATAA ATTAGGGTTCCCTAACCGTTCAATTTACTGTATTGGAACAGTTAGCAGAATCAAAACGAACCAGGGGCGAACGAGTTGAA GATGGCACTGCCCACAGGGATAGACCTCTCTACGAGGTTGCTTCTTCGCATTCTCATTGATTACGACACAATTTCTCAAT CACTCACTGATCAAACTTTCAATTGCAGATTTTAAAGGAGCAAAAGGACAAGAAGGATGCAGAATTCAATGAAAGGTTCA AACATAGTGAGTACTATTCAACCATAAACACTATAATATATTTTTACTACTTTGGTTGAATTTTGATTCCTCTATAATTC TCACAGGACCACCTAAAGCTTTAGATGAAGATGAAACTGAGTTTCTTGATAATTATGAAACAGTAAGTTTCTGCTGCATT TTTTTGTTTCACTGGATTAAGATTTTCATGCCTGGAACCTGCAAGTGTCACTTATCAAAATTTATCTGATTAGCTATGTA TTTATCTTCAAGGGTTGTACTTGTAGTTGTATAGACAGCTATTTTAGGTAGTTTGAAATTTGAAAACAATATGTTGAAAT TTGTAACATTGTGGAAAAGTGGGAACAATCGAAATGCTTGTACAATTTGTACATGCCAAGTTTATGGAAGTGTGTGTTCT TTCTAATATGAAATTTGTGCCTTTCAACCTTTCAGACAAGGAGGGAATACGAACAAAAAGTGGCAGATGAGGAAGCACAA CAAATCCGCAGCTTTCAGGTTAAGTCATAGAAAGACTTGCCGTTGGTGATGTGAAGTTTTATCATCATGTGTCCTTTACT TGGTCAATGATATTTTTGTAACAACATTGTTCTTGTATGCTGATTCAGGCAGCGGTTGCAGTGCAGTCCAACACTGTGCA TGAAATTAAGGAAAATCCCCCTTTACCCATTGTCCAGGTTGGTCAGTAATTTTTATCTCTCGCTACCATTTTTTTCTGTA ATGGTGTAATGTCATAAGGTTTACAATTCCGTACAGTAATGTTACCGCTTATCTCCTGATTCCTTTGATAACTTCTTAAC ATAATAGGCCAGTATTCATGTCTATTATGCTTGGAAGTCCATCTTCACCAACTAGTCTACTTAGATGGGTTTGACCAACA TAAAAAATTAACATCTATACCAATCTATTTGTGTAGCATATTTCCCTTCATGTAGTTTTTGTTTCCTTAAAGTTCTTACT TGTAATTTATGAACAATTGTTTTTGAATCTTTGGACAGAAAGATCCCCTTTTGATATTACAAAGTTACTAGATTACAACC TTCTCTCCTCCCTAGACTGCTTAGTGTTATTATTTATTTTGTACATCCTGTGTTTGTCTAAGATGAAAAAGAAGCCACAA GTTGTAATACTGAAGGGAATTCTAAGTTCTAACAGCATTAGCATGTTTGTTTCAAATTTCCTTCACCATAATTGTATGAT GCAATTTTGCACGTAGGATATTTTTTTAATTTCTGCAAACAGTAGTTTGGAAGGCCCCCACCGTTAAAACCAACATACCA CAAGTCATTGCAAGACTCACAACAGTGCATGTAGTTTTGGAAAAAAGGATGTGCGTGTATTTTGTGGCTAGTGCTATTTT TATAGTTGTCAATTGTCACACAACCTGTTTTCTCTTGCAGGAAGAGAAGCCTGCAGGAAAGAGGAATCCGGCTTCTCGTC CCTTAAGCATGATTATAAAAGTCAAGCCCCAAACAAAAAAAGCCAAGGTGGATGAAGGAAATGCGGAAGAAGTTTCAAAA GCAAGAACTACTCCTGTGAATGATAACAACAAGTCTTTAGAACTGGTACAGTCATTGAATGGTGAAGCTGATAAGTCCCA TGAAATTGCCCAAACTGGCCTTGTTTCATATAGTGATGAAAGTGATGACGACTTGTAGTTTGATGTTTGTATGTTGATAA ATTGCATGATTTTGACTATTTATCTCATGTGGCCCTTATTTTCCTTCTCATAGCACTCATGCATCTCCATGCATATATTC AGAGAGGCGGAAACCACCACATCCAATGTGGCACATAAATCCGAAAAGGTACCATAATTACATTGAAATTACTTATGTGC ATACTTTTTTTGACATGGAAGTAGAGGAATTAATAGAAAATAGTAGCAATTGGTTCTTAGTGAATAACTGATAGCCTCTT ACATTTCAGAAAAGTTTATAACATCTGCAGTTTTAGAAATAAAATTGAATACAACTTGTTCTGGATCAAAACCTCGAGAT AGGTAGACTATAAGATCCGAGTCATCAATGATGAAACTCTTCACAAATTCACCTTGTTCAAGGGGTGGTAACATAAAAAG TGTATTCAGTGACTATTGGTTAGGCGTAACATAGATGTGTAAAACATTTTAGAGTAATCTGAGCCGCCATTTATACAGTA GTTGCAGTTGTATGAAGTTGGACTAGGGAAGCATAATATCCATCCTTAATGCTAATGAGAGTCTCGTGCCTTCCTTTCTC CACTATAACTCCATTTTTAAGTACTATAATCACATCAGCACTTTTAATTGTAGATAGACGATGTGCCACAATCACAGTTG TCCTGTTCACCATCACTTTGTCTAATGCATCTTGAACAACTCTCTCTGACTCAACGTCTAGTGCACTTGTGGCCTCATCT AGGAGCAATATATTTGGACTTTTTATGATTGCTCGTGCAATGGCTACTCGTTGTTTCTGCCCACCAGATAGTAGGATTCC CCTTTCTCCCACTACTGTATCATAACCCTATTTGCAAAAGACAAAAAAAAAGTCATTTCCTAATGTTTAATTTGCAAAAC ATTTGTCCAGGTCAACATTTCGTACAACTGGACAGAAGTCTACTTACAACTATTGCAAAGACAAAATAAGACTAAAAAAT GTTTAGCACCACTTTTTTTTTTTTTACCTGTTCTAAGCCACTAATAAATCTATGGGCATTGGCTAATTCTGCTGCAGTTA TGATTTCTGCTTCAGTTGCATTGCCTTCCTTTCCATAGGCAATATTGGCACGGATAGTGTCATTGAACAAGATTGGCTCT TGGCTTACAAGGCCCATTTGCTGCCTTAACCACTTTAGTTGCAATTTCTGAATTTCTATACCATCAATTGTAATTTGACC TGCATCAGGGTCATAAAATCTTTGCAACAAGGCAATCACTGTGGATTTCCCACTTCCACTTTCACCAACAAGGGCCACAG TCTAGAGAACAACAAATTTGATTGGAACCATTAGTTGCAACAAGCACTTCCACTGATGAGAAATGAAGTTTAAGAAAAAT AAATAAATAAATAAACCCTTGAACTTTACCTTGCCAGAATGGATAGTCATGCTAAGGTCTCGGAAAATTTGTATATCCGG CCTAGATGGATACTTAAAGCTAACATGACTTAGTTCTATTTCTCCCTTTATACTATCTAGTTTGCCACCAGATTCATCAC TTGGATCTATCTTTGACTTCTGATCAATTATTTCAAATATGGAAGCAGTAGCTGTCTTGCCTTTGCTAGAATCGGGAGCT AGGGAGCTTGACCGTGAAATTCCAATAGCTGTCATTGTTAAAGCAAAGAAAACCTGAAAAAATATTACAAGACAAAAATG TAACACTTTTTAACTTCCCCTACAAATTAACAATGAACGTTGATATAGTGTCACACGAGTTTAGTACCCGAAAAACATCC GAGAATGATGCCATGCCAGCGTCCACAAATCTGGCTCCAGCATGGAAAGTCGTTGCATAAACACTAAAAAGTAAGAAAAA TGAAACCCCAAATCCTATTCCACTTATCAAACCTTGTTGTATCCCTGTTTTTACTGGACCTTCACATTTCTTACTATATA GTTCCATGACTTTCTCCTCAGCACAAAAAGAAGCTATTGTTCTTATGCTTCCAACAGCATCACTAGCAACTTGACTCGCT TCCTCATACATCATCTGCATCAATTTGCATCACAACAAATCTAAAGTTACAGAATCTAAATCATGTAGTCACTTATTAGC TTAGTATAGTTGTGAAAAGAGGTATACCTTTGCATCTGCACTAAATCCCTTCATGAATTTAATTTGAACATATCCATTCA TTCCCATAAGGGGCGCAATGATAACAACAATCAACGCCAACTGCCAACTCGCAATAAAAGCAACAATCAAACCTGTCAAT GCAGTTGATATGCTTTGAATCAATAGCCCCAAGGCATCACCAACAAGGGCACGTACAAAGGCAGCATCTGTTGAGAGTCT TGCACCAATTGCACCGATTGAGTGCTCAGGCTCTTCAAACCAACCAACTTCCATGTTGATCAACTTCTCAAAACAAACCA ACCTAATACGTTGGATTAACCTGCTGCCAGCTACAGAGAAAAAGTAACATCGGGCTGGAATTGCCATTAAAGATGCAATT CCGAGGACCACGAACATTAGTGACCAAAACTTGGAATCTTTTTTCATATCAGGAAATGGCTCATATAGTGTTTTGATAAC ACTAGAAAGCAAAACACCATATATTGGAAGTATGGCACCATTTGCTATGGCAGCTACACATCCCATCAAAAGTGCTGGTA TCTCTGGCTTATTTAGGGAAGCAAGGCGTAGGAGTGGAACCTCTTGTGATTTTTCTTTAGGATGTAACTTTTCGTTCCCA GCTTTAGGGACGTCAACCCCTGTAGGTAAACCTGAAGAAACTGAAAATGTGTGGCGGCTACTATTACCCAAAGATGATCT GGATTCTGTAGAAAGTTTTCTTTTGTTTTGATTGTCTGCACTTTCTTTTGATTCGTTGTTTACTTCTTGTAAACGTATAA GTTGAGAGTAAGCTCCACCAGGATCCTTGAGTAATTCTACGTGAGTTCCTGATTAACAAAAACAAATTATGTTTTGTGAT CAACAGGTGACTCAACAGTAGAAGTGATCAATATCTTGCGTACATTTCTATCTTACCTTTCTCAATCATTTTCCCTCTAT GAATTAAAGCGATCATATCAGCATTCCTCACTGTGCTCAGACGATGTGCAACAACAACAGTAGTTCTGTTGACCATGACC CTGTCCAAAGCTTCTTGTACTGTCCTTTGAGACTGTGCATCAAGTGCACTTGTAGCTTCATCTAGAAGTAGAATTCTTGG ATCTTTTAGGATTGCTCTTGCAATGGCGATGCGTTGTTTCTGTCCGCCAGATAGCTGAGTCCCATGGTCACCAACCATAG TGTCCAATCCCTAGTAGCAAAAGGCACAAAGTTGAACATTACTCAAGTTGCAAGAATTAGCTTTGGAGTTGTATAAAATG GTTAGAAACTAGAACCTGTGGCAGTCTATCAATGAATTTAGCGGCGTTTGCAAGTTCCAAGGCAACTCTTATCTCTTGGA TTGTTGCTCCCTCCTTTCCATATGCAATGTTATCCTTAATGCTAGATGCGAAAAGCGCCGGCTCCTGACTTACAAGACCA ATTTTTCCTCTGATCCATCTGAGTTGAAAATCTTTCATGTTGATGCTGTCAATAAGAACTTCACCTGCTAGTGGGTCATA GAATCTCTCTATCAAACTGATAATAGTAGACTTCCCACTTCCACTTTCTCCTACTAAAGCTGTAGTGGTACCACTAGGTA TATGAATAGAGAATCCATTGAATACTAACTCCTCAGGCCTGGTTGGATAACTGAAATAAACATCTTTTATATCTATGTCA CCATGAATATCCTCTAATATTTTTCCGTTTGGATCATAAGCATCTATCTCTGGCTTTCTCTCAATTGTTTGAAACATTTT ATATGCTGCTGCTTGACCAGCAGCAAAAGCACTCATGGAAGGAGATGCCTGGCCAAGAGACCTATATGATATGAAAAAAG ACCTAAGTTGAGGCATGCATATATTTTATCTCTTATGGTGTGTGTTGTTTTGTAGGTTTCAATAAACTTCATTAGCTCTT GAAATATATAAAATTGAATGTACTTACATTGAAGCAGTTAATACAGCAATGATGATATTGATCACCTGACCCCCGTTATA TCCTTTTTCTATTATCATCTTTGCTCCAAACCATACAGCCAAAGCAAAAGTGCAGAAAACAACTAACATAATCATGCCAT GGCCCATTCCGAATACGAAACCTTCATAAACTCCAGATTTGTAAGCACCTGCAAGGTATCTTCTGTAACTAGATACTGCT TGCTTTTCCCCTGTAAAGGATGCAACCTAGAATACAACGAGAAAAAAATAATGAATGTCATAGCATTGCCATTGAGCAAA CATCCTAGAATGTTAGAAAACCTTTCTCTAATTGACTATAAAGCCAAAATCAGGCTTATATGAGTAAGATTTTGAGTACT AGACTTGATTATGAGGAAAAAGTTGGTTGATCCAAACATGCTGGATTTGGCACAAAATTTACACGTTTATTAACATACAG TTTTTATTGAGCCAATTGTCTGTTCAGCTACATGTGCAGCTTTTGCATATGCCTTTTGACCTCTGGATGTCATCTTTCCG ATGAGTAAGGCCATAGCAGCACCTGAAGCAACAAGAAGTGGAAGAGCGGACAGCAAGACAACCGTCAGAAGCCACCCTTT GATAAATGCTACCACATAGCCCCCAACGAATGTAGCTATTAGCTGCAAAAGTTTCCCAACCTATTTATACACGAAAGAGA GTGTTCAGTAAATTCAAATTGTCACTGTAGGATTTATTTGCAAGTTTGATTTTGGAGGGAAAATGAAGGCTTATGAGAAA CCCTCCCTTTGTTTGAGAGTTTTTTAATGGAGGAAGGTCTTGGAGGGGTTTTGTAGAATTTTTCAAAAATTCCCAGAACC CTTACTCTTTGCATTCAAGTTTTGTATAGTAATAGTAGTAGTAGTACCTTCTCACCCATGGCATCTTGTATGAGAACTGT GTCCCCTGACATTCGCCCTATCACCTCCCCAGTGTTTGTTTCCTTATCAAAAAAAGCAACATTTTGTCTCAGTATAGTTT TCAAATACAAGCACCTTATTCTTGTGGCCTGTCTCTCCCCTGTGATCATCCAGCAAGCCACCTCTGAAAAATTAAATAAT TTTTTTCTAGATTAGTGTCTTTTTTTCAAACTCTTTTCTCTTTGGTCATAGTCAATTCCGAAACCCAAAAACTAGTAATT TAGAGCATATTTGAATCAACGTCGTCACAATTGATTTTGGATAAAATTGGTTTTGACAAAATTGATTATAGTAAAAGTTA GTTGACATTTTAGTGATTTATGTTTGAATACATCTATGAAAAAAATGACTTTCATAAGACAATGTTGTAAAATTTAATTA TAAAATCTCACAATTAATTACATTCAATGTAAAAGTTACTCTCTTGAGCTCCTGGCATAATTGATTTTAGGACTGAAATT AATTCTCCAAAATGACTCTCAAGTCTCAAGCATCTATATTGTTGTCCAAAATTGGTTTTACTCAATCATAGTTGATTTTC AAGTTTCCCAATGGGGAACCAAACACACACTTAAGCTTCACCCTAGAGATGTTGAGGTAACAAAAACTTCGAGTGCAAAA TATACTTACGGAGGAATGCAGCCACACCATTGCCTATTCCTAAGCATACAAATTTTAGAGAGACCTGCAATTTTGACAAC TAAAGTAATTATTACATCAATACAGCAAGAGATACTCTACACATGTGACTTTGAATTGCAATAATGGAAATTCTTCGCCA ATCGATTCTAAAATCAGGATCAATTCTGTGATGAAGTGAAGCTTCTGAGATTTTGAATTGATTTTGATAAAGAGAAGTTG ATTGAAACATGTTACCTTGGAAACTTGGTTGACAATGTCGGGGCTAAACTGGTTGTTTCCGAAGCTATTAACCATTTGAC CAAACAGCAATGACATCATAGGTATGCTCAAACCATTTCCAATGGCTCCAATGGTGCCAACAATCATCAACAGGATGTCA GTGGAGTCTGCAAATGTGAAGAGTCTGTGATATGGAACAATTTCAACTTTCTCTTTTTGTCTGCTCTTTTCCCCGTTGCT GCTGGTCCCATCATGTTTGTGCGTTCCTCCATTCTCAGGCCTCATATCAGATCAATGCCTTCTCTACTCTCAAGTCACCA CCTATAGAACACAGTTGTGATACACAGAATAACAACTCTGAAAAGGTTAGCCAAATAAAATTCTAGCTAACTACATTTCT TGTTAAAGATTAGTAGCAGGAAACACGTTTGATTTACTGATCCATGCTATAAGAGAGGAAGGAGGGGAGATATTTTTCAT TTTCTGACCAACCTCCACAAAAAGAAAGAAAACATAAGGAGAAAAAGAAACAGCTTATCACTGATATTTATCACAACTTA GATTAGCCTTATTAAATTGGTGGTTAGTTGAATAACGTTTCATCTCACATCAAATTTAGAAGATGTTTGTATCAATCCAG AAGGAAATGAAGAACCCTGCTGCTCTGTGAAGGGTCAAGCCAAAAAAATATACAGCATTATATATACCATCCAGCACCAT TGTAACTGTGGCTCACATTTCAAGTTAATAGATTCATCTAAACTATAATTAACATCATAATCGCGCGGCTTCATGAAATG GACATAATCAATAATATGAACAAACATGTGTACGAGAAGCCAAAAAGAGAATGAATGAAATGAACAAGAAAGGGGAGAGG AGGGGGTAGATGATTATTTTTTTCATTAAACCAAAGAGAATGCAGAAATGGAAGAGAGCCTGTATAGAAGGATATTATTA TTTTTTTTTTTTTAAAGAAAAGATTGAAAAGGGTACC
CDS sequence (LotjaGi1g1v0754700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACAATGATGATACGGATCTTCCTATCAGGATTATGAACTTTGTCTCTGAAGACCAATTAGCAGAATCAAAACGAAC CAGGGGCGAACGAGTTGAAGATGGCACTGCCCACAGGGATAGACCTCTCTACGAGATTTTAAAGGAGCAAAAGGACAAGA AGGATGCAGAATTCAATGAAAGGTTCAAACATAGACCACCTAAAGCTTTAGATGAAGATGAAACTGAGTTTCTTGATAAT TATGAAACAACAAGGAGGGAATACGAACAAAAAGTGGCAGATGAGGAAGCACAACAAATCCGCAGCTTTCAGGCAGCGGT TGCAGTGCAGTCCAACACTGTGCATGAAATTAAGGAAAATCCCCCTTTACCCATTGTCCAGGAAGAGAAGCCTGCAGGAA AGAGGAATCCGGCTTCTCGTCCCTTAAGCATGATTATAAAAGTCAAGCCCCAAACAAAAAAAGCCAAGGTGGATGAAGGA AATGCGGAAGAAGTTTCAAAAGCAAGAACTACTCCTGTGAATGATAACAACAAGTCTTTAGAACTGGTACAGTCATTGAA TGGTGAAGCTGATAAGTCCCATGAAATTGCCCAAACTGGCCTTGTTTCATATAGTGATGAAAGTGATGACGACTTGTAG
Protein sequence (LotjaGi1g1v0754700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDNDDTDLPIRIMNFVSEDQLAESKRTRGERVEDGTAHRDRPLYEILKEQKDKKDAEFNERFKHRPPKALDEDETEFLDN YETTRREYEQKVADEEAQQIRSFQAAVAVQSNTVHEIKENPPLPIVQEEKPAGKRNPASRPLSMIIKVKPQTKKAKVDEG NAEEVSKARTTPVNDNNKSLELVQSLNGEADKSHEIAQTGLVSYSDESDDDL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 211 | 202 | 3.7E-58 | ||
| MobiDBLite | 22 | 42 | 21 | - | – | |
| Pfam | 25 | 103 | 79 | 2.3E-16 | ||
| Coils | 78 | 98 | 21 | - | – | |
| MobiDBLite | 113 | 212 | 100 | - | – | |
| MobiDBLite | 151 | 165 | 15 | - | – | |
| MobiDBLite | 167 | 186 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0754700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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