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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0756500 |
| Transcript ID | LotjaGi1g1v0756500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dihydroorotate dehydrogenase, putative; TAIR: AT4G01897.1 dihydroorotate dehydrogenase; Swiss-Prot: sp|Q04977|AMYM_BACLI Maltogenic alpha-amylase; TrEMBL-Plants: tr|I3SNF2|I3SNF2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0756500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:132983496..132986883) extracted from Lotus japonicus Gifu genome v1.2.
CGGGCTCATTGTGACGCAAGTTGCAAGTGATGAAACGGTTACTGATTTGACCAACAAAAGAAAACGGTTACTGGGGAAAA ACGGTTACGAAATTGGGAAAAGAAAATTCAGAGAGAGCGAAGAAGATGAGTGGTATCTTCGTGTACAGAATCAGCACAGC GAAGGAGTGGGAAGAGTTGCAGGCGAATGGCTCCACATTCGGTGGTAACCTTGACAAATCCTCTGCGTTCATCCATCTCA GCAAGCTCGACCAGGTTAATTGATTAGGGTTTTGAATTTCTGTCAATTTCTGAATGCTATTAAGATGTAATCAGTAACTA ATCAATTGATCAAGTGAATGAGAATTCTACTGATTTGAATATTTGATTTTCTTAATAATCTAATTTTCAGGTTCGGTCAA CGCTGGAGAGATTTTACATGAACTGCAAGGAGGAACTCTACCTGCTTCAAATTGATGCTAAAAAGGTTTGCACATGACAC ATGAATTTTCACAGGAAGAGATAACTTTTTTTTTTCTTCTCTTAATTTCATATTAGTGTGAGTTGCATTGGTTGTTATTA GGATCTAATTGTTGTTTTCAATCAAACAAGAACAGTTTCTACTTATTATGAGGCCACTTTATTGTGTTTCTAATAGTACT GTTTTCTCCTCAGCTTGGCGATGGTTTGGTGTATGAAATGGTGGATGGTTCCAATAGCTTCCCTCATTTCTATGGGCCGT CTCGAAGCTTTAGTCCTCTTTCTCTAGATGTTGTCACTAAAGCAGAGAAGCTTTCGCTCTCAGATGGTCGATTCACTTGT TGTTTGCTTGATCAAGTGGTAAGCTGATCGATCTGCGCCATCATCTTCTTATTCTGTCATACTTCTTTGTAGTTTCATAG TCTTACTGTGGAGTGTGAATGTTTGTTGCCTGCTATATGCCTGACTATGCACAAACCTTGATAATCATTTCTGAGTGAAC GTGATGGAGTGCTGAGATGTCACTGCTAGAATCCTACATGGGTTATACGCAAATTGTCATTTTTAAGTACACAACAGCGG TGGTACCTTGGGGCATGTTCCCAAAGTACTTGCATTATGTCCTCACTCCTCACAGTTACCGTGACATTGATATTGATTTC TAACCGTAGGTAGCCGAGAGAGTAGTAACACGATTCACACTCAGTCTGTAGAATACAAATGAGAATATCTCTTTCATTTC CTACGTTGCCTCTTGTCAAAGTAGTTGAGAGAAGTAGACAATTTTTCACTATTGATGCATTGAAGATGTGTGTTCAGCAC TTTACAATTTTGCTTATATACACACTCTAAACAAATGGATCCTGTAACTAACTATGAAAAGAGAGGGAAAGTTAGGTAAT CAGTTTTAGCTAACTGACTCCAATTTGTTAACTACTTCTTAAACAGAGAACTAGTAAATCTAATACATGCACCCCCTCAA GTATGGCCTAGATAACCATGTAATTTGACACATTTCTCCTTTGTATGGCCTAGAATTGCAGTGTCTGCATAATGGCCTAT CTTTCTTGACAAACTGGTCTTGGATTGCTGTTTGTTCTGTGTGATCTTGGACTGGTGATCAGTATTCACGTTGTAATTTT CTGTCGATTGTGAAGAAGAACTAATCTGCCTCTTCTTTTCATCTTGGATTACAAGTGAGAATACATCATTGATAGAAGGT ATAGGTCGCATAAGCAGAATTTGCCCTCTAACTTGGGAAATGAAATCAATAATTCCCATCAAGAAAGTGAGAACATACTC TGTTTGGAAATGAGCAATTAGAGGTTGAAAACCCCCACAATTACATTGATGAGCAGGTCTATACTCTCCTAATTCCTCCC ATGGTGTCTTGACTTTAGTAAAGTACTGACTTACATTGAGGGTTCCTTGAGAACAATGCTTAAGATCTTTCTTCAACTGG AAGACCCTGGGTCAATTTCGCTGCTCAAAGTGAGTTTGAAGATCACTCCAGTAGTTTAATAAACAAACATGGACTAATGA CACCAAAATAAAGCAAACATGGGCTTTTTATTTGTTACATAGGAAAATTAATATGTGATTTCTTGAATTTTTTAGTCCTA TAATGCACAATTCCTTCCTGAAAACTAAAATAAATAACATGTGAGGTTAACTCTTTTCCTTTGAAACATTTAAATGAAAA ATAGGAAAAATAATTAGGAGGCCACTCAGTTTCTTGAGTAATTTCTCTCTCCCCATACTTGTTTGATTATTTTGGGATCT CTTTTATGGAGTGTGTCTACTAAATTGTACTCCCTCCATTCCTTTTTATAAGAAGGCTTAATTGCACTTTTGGTCCCCCA ACTATTGCCTTCCTGCGAAAATCGTCCTCAAACTTCAAAATTAGCAAAACACGTCCTCCAACTATACACCCGGTTGCAAA ATTGGTTTTCCGTTAACTTCCGTCTAAAAACTAACAGAATATTCCGTTAAAAATGAATTAAAAAATAAAGAAAAATGAGA AAAAAATAGTATTTTAATTGAAATCCAGAAATACCAACCTAACATCTCACCTTCATCGTTCTCTTCCCTTTCTCAGCCCC ACTCTCTTCTTCTTATTCTTCTTCTTCCCACTCAACCACCACACTACCACCACTCAACCACTGCACCACCACAACTTTCA TGCCACCACACTCTGTTCTTCTTCATCCCTTCTCAACCCCACCGATCCCAACATTCAAATCAACTACGAAATCCAAATTT CTCCCAGCAAACGCTCCCAAAAGAGAATCAAACCCAAAATTCACAAAGATCCCTTCCCCCTTCCATCTCCAAACCAACAT TCACAGCAAAACCAGGAACTAAAATGACCAAGACTTCAAACCAGGAACCTCAAACACCAAACCCTAAACCATAGCCACAG GCCCCAAATTCCAGCTCCATGTTCTACTGCCGTGAGAAGCGGCGTCAATTTGGGTTTTGTGGGGGATGGGCGATTTGGGT TGATGATTTCATCAAATAGAGGTGGGGGTGAGGGAAGGAGTGGGTCTTGATGATGGTTCACGGCTTGGCAGAGGCTTCAA TGATGCTTCACGGTGTGGGTTTGGTTAATGATACAGGAAGTGGGTCTCTTGCACAGAAACAACGATGGAGAAAGGAAAAA GCTTGGGAAGGATGAAGAAAATAGAAGCGGTGGTTGAAAACAAGTGAGGAATGAGGAGGGGAGGAGGAGTGGTGGTTATA GATTGGGGGACTAAAAATGCAACTCACTAAATTATGCAGGAAGGGAGGTGGGTGAGGAAAGGTGAGGGAGCAAGAAGAGG ATGTGGTGGAGAAGAGAGAAGGGGAAGAGGGATTTTTGAAGTGGGGGAACATGGATTTGTAGATTTTTTTTATAAAAAAA AAATTATGGGTTTTGTTTTATGAAGATG
CDS sequence (LotjaGi1g1v0756500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTGGTATCTTCGTGTACAGAATCAGCACAGCGAAGGAGTGGGAAGAGTTGCAGGCGAATGGCTCCACATTCGGTGG TAACCTTGACAAATCCTCTGCGTTCATCCATCTCAGCAAGCTCGACCAGGTTCGGTCAACGCTGGAGAGATTTTACATGA ACTGCAAGGAGGAACTCTACCTGCTTCAAATTGATGCTAAAAAGCTTGGCGATGGTTTGGTGTATGAAATGGTGGATGGT TCCAATAGCTTCCCTCATTTCTATGGGCCGTCTCGAAGCTTTAGTCCTCTTTCTCTAGATGTTGTCACTAAAGCAGAGAA GCTTTCGCTCTCAGATGGTCGATTCACTTGTTGTTTGCTTGATCAAGTGGTAAGCTGA
Protein sequence (LotjaGi1g1v0756500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSGIFVYRISTAKEWEELQANGSTFGGNLDKSSAFIHLSKLDQVRSTLERFYMNCKEELYLLQIDAKKLGDGLVYEMVDG SNSFPHFYGPSRSFSPLSLDVVTKAEKLSLSDGRFTCCLLDQVVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 4 | 118 | 115 | 3.3E-24 | – | |
| SUPERFAMILY | 5 | 114 | 110 | 1.09E-24 | – | |
| PANTHER | 5 | 121 | 117 | 3.0E-44 | ||
| Pfam | 10 | 96 | 87 | 3.0E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0756500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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