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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0759900 |
| Transcript ID | LotjaGi1g1v0759900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BZIP transcription factor; TAIR: AT3G62420.1 basic region/leucine zipper motif 53; Swiss-Prot: sp|Q9LZP8|BZP53_ARATH bZIP transcription factor 53; TrEMBL-Plants: tr|C6THT3|C6THT3_SOYBN BZIP transcription factor; Found in the gene: LotjaGi1g1v0759900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:133317685..133318895) extracted from Lotus japonicus Gifu genome v1.2.
CACTGTATACGGCAGCAACAGTAACGCGGTCCTTTGAAGCCCTCAAAATTAGCATCCATTCATGAATCGAATCCCCCACT TCTCATATTTTCTCTATAAAATCCAAACTTCCCTTTCTCATTCACCTTCCTTTCTTCACTCACAAATTCTTCTCTCTCAA CCAGATCTAGGGTTTCTGATCACAACCCAATTCGTATTAGGCTTTCGCAAAACCACACCAATGTTTTCTCCATTTTTATG ACACTCACCTCCATGCGTCGATTTCGTATGCTTCATTCATTCTCAGTTATCTTCCTCTACTGGTTCTACGTTTTCTCATG AATTCCCTTCTCCAAATCGCTTAATCTTTTTCTTCTCCTTCGTTTCATTCTTCGTTTATCATTGTCATTCTGATTACTAC ATTCACAACAAGTTACATTTCGCCTTAGTTTTTTGTTTTTGTTTGCTATCAATGGCTTCGATTATGAGTTCGGGATCGGC ATCGGAAGGCGGAGGAGGAGCAGATCTGCATGTTGACAACGAGAGGAAGAGGAAGAGGATTCTGTCCAACCGCGAATCCG CTCGGCGATCACGGATGCGGAAACAGAAGCAGCTGCAGGATCTGACTACCGAGATCACCAAACTGCAGGTGGGGAATCGG AAGCTGGTGGAGGACATAGCGGCCAAGGAGAAAGCGTTTGCTGAGGTCGATGCTGCGAATGCCGTACTCAGGACACAGAC TATGGAACTGGCTGATCGGTTGCGATTCCTCAACTCCATTCTCGAGATTGCTCAAGTTAGCGGATACTCTGTTGAAATTC CCCAGATTCCTGATCCTCTTCTCACACCATGGCAGGTTCCCCGTCCTACTCAACCCATCATGGCCTCTGCAAACGTGTTC CTGCATTGATCTCTGTTTGATTTTCAATTTTAGCAGAGTCCAATTAGGGTTTTATTCGAATTATTAGTCTTTTTTTTGGG TTTAGAATTTGTGTCCAGATAGTGGTGACTGCGATGCTTTTGTGTAAGAGATTTCTGGAACTGTCCCTATTTTGTGTTAT GTAAGGATTCTTAATTATCAGTGATTGGGACTTGTTTTGCAATGATGATATGAGTTATTAATCATTATCCTTAGCTTTAT TTTAATGGAGTAGGGTTGTGCATGTCTGAGAATGCATGGACCCTGTAATTGAAAAATCAGAAAAGGGACTTGTTGATGAC ATAGAAAGGAG
CDS sequence (LotjaGi1g1v0759900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCGATTATGAGTTCGGGATCGGCATCGGAAGGCGGAGGAGGAGCAGATCTGCATGTTGACAACGAGAGGAAGAG GAAGAGGATTCTGTCCAACCGCGAATCCGCTCGGCGATCACGGATGCGGAAACAGAAGCAGCTGCAGGATCTGACTACCG AGATCACCAAACTGCAGGTGGGGAATCGGAAGCTGGTGGAGGACATAGCGGCCAAGGAGAAAGCGTTTGCTGAGGTCGAT GCTGCGAATGCCGTACTCAGGACACAGACTATGGAACTGGCTGATCGGTTGCGATTCCTCAACTCCATTCTCGAGATTGC TCAAGTTAGCGGATACTCTGTTGAAATTCCCCAGATTCCTGATCCTCTTCTCACACCATGGCAGGTTCCCCGTCCTACTC AACCCATCATGGCCTCTGCAAACGTGTTCCTGCATTGA
Protein sequence (LotjaGi1g1v0759900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASIMSSGSASEGGGGADLHVDNERKRKRILSNRESARRSRMRKQKQLQDLTTEITKLQVGNRKLVEDIAAKEKAFAEVD AANAVLRTQTMELADRLRFLNSILEIAQVSGYSVEIPQIPDPLLTPWQVPRPTQPIMASANVFLH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 27 | 27 | - | – | |
| PANTHER | 9 | 141 | 133 | 2.6E-51 | – | |
| PANTHER | 9 | 141 | 133 | 2.6E-51 | – | |
| SMART | 21 | 85 | 65 | 2.5E-9 | ||
| ProSiteProfiles | 23 | 86 | 64 | 9.749 | ||
| SUPERFAMILY | 25 | 72 | 48 | 4.98E-10 | – | |
| Pfam | 25 | 75 | 51 | 1.1E-8 | ||
| Gene3D | 25 | 76 | 52 | 3.7E-10 | – | |
| CDD | 26 | 77 | 52 | 9.31048E-14 | – | |
| ProSitePatterns | 28 | 43 | 16 | - | ||
| Coils | 34 | 54 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi1g1v0759900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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