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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0780300 |
| Transcript ID | LotjaGi1g1v0780300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aldo/keto reductase family oxidoreductase; TAIR: AT1G60690.1 NAD(P)-linked oxidoreductase superfamily protein; Swiss-Prot: sp|C6TBN2|AKR1_SOYBN Probable aldo-keto reductase 1; TrEMBL-Plants: tr|A0A0L9VKQ1|A0A0L9VKQ1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0780300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:135243781..135247106) extracted from Lotus japonicus Gifu genome v1.2.
GTTTATGACATAATCAATGATGAAAAGTGAAAACAATGTTCCTACTGGGCTGACACATTGGATGATGAAATCAAAGATTG AAGAAGAAATCAAGTTGAGTTTCTTATATGTAAAGTATTAATGAGAGAAATTTATGTATATTTATCTTGATTATTTTTAA AATTGAATGATTGTAGCTGTGAAGGTTGACTGCAAGGTAGTACATGAGATAAAAGTCAACTAAATTTGTTGTATATAAAG GAGCGCCATAATGCTTCCCTAGTGCGTTAGGTTCACCTACCAAACCACACCAACAAACAAACATTTGAAGAGGAAAAGAA GGGAGAGTGAGAGAGCTGGAACATTGGAGAGGAAAAGAGAAGCACAAAAATGGGTGAGATTCCACGAGTGAAGCTTGGAA GCCAAGGCCTTGAGGTAAGTTAAGTCCATTGAAATCATCATTTTGAGTTGATTCCTTATTGTGTGAATGATTTGATTTTT CAATTTCTGGTTTTGACTGTGTTGTAGGTTTCCAAGTTGGGATTTGGGTGCATGGGCCTCACTGGAGTGTATAACTCTCC TCTTCCTGAAGAAGATGGCATCTCCTTGATCAAGTATGCTTTCAGCAAAGGGATCACCTTCTTTGACACATCAGATGTTT ATGGCCCTCATGTCAATGAAGTTTTGGTTGGAAAGGTACTTTAACTGTAATACTATCAGTAACTGATCTCGTTCAATTTC TTTCAGTTTTTAAAATAGAACGATAATTGGAAAATTATTTGTGCACATATGCACAATGTAGACACCGGATTGAGAAAGGA ACAAAAGAGAGAAGTAAAAAGTGTGGTGTCTGTGAGGTGTCTATATTGTTTGGGTGTCTAAATATCATTACTGTAATGAT GTGATCTAAAATACATAACATTTGAACTCTCAGGCACTCAAGGACTTGCCTCGAGATCAAGTTCAGATTGCCACAAAGTT TGGAATTGTCAAATTTGATTCTGGTAATGTTATAGTGAATGGTACCCCTGAATATGTTCGATCCTGTTGTGAGGCTAGCC TTCAGCGTCTTGGGGTGCAATACATTGATCTCTATTATCAGCACCGGATTGACACCTCTGTTCCCATTGAGGACACTGTG AGTAATGTCCCCATGAAACTTTTCTTTTTTTACTTGTCTTCTGGGTTTGGGACAATTTGGTATTTTGGTTGGTAGCTTTG TTTGTCTGTTTTTGATTTGCTGTTTTTTAATCACAGATGGGTGAGCTTAAGAAGTTGGTCCAAGAGGGAAAGATAAAGTA CATAGGATTATCTGAAGCTAGTTCTGGTACAATCAGGAGGGCACATGCTGTTCATCCCATTGCAGCTGTGCAAATGGAAT GGTCCATTTGGACTCGTGAAATTGAGGAAGATATTGTTCCGGTTTGCAGGTATATACATGTCTAGGATGTAATTACAGAA TTTGCTATCCTAGCTTATTAGTTTCCTACTTCCTGGTCAACCTTTGAGTTTGAGTTTCTTAAAAGCCCTACCTTATAGGA TTATTAGTGTAAATTGTGATTGTGGATACCCCATGAACTATTATTTCACTGAAAAATTAGACTGATTGTGAGGTCACTAG TATTTCTTCAGGAAAGAGTTAAGCCATTTGTTTTTATCCAAAGAAAACAACAATCTAGCTAGTGCATGACTCAAGTTGGA TAGCTCCCAAAAAACTTAAAGGAAAACATGTAAGGTATCTATTATTGAATGGTTTCAACTTTCAACACCTTTATTTTTTG TCTGTCTTCTCTAATCTATTTATATTTTTCATCTTGATAAATTTGTTGAGTGTTGAGGCAACAAGCCAACATGCCCTTTT TCTTTTGTGATATCTTTCAAGCGAATAAAATTGTTTGACTTCTAGAGATGCAATTATGTTTACTTGCTTAAACTGAAACT TTATGATTTGTGTGTAAGCGACCAAGTTATTTCGCTTCCTGATTTTGCTTTTCCATGTCCTTTGGAATTCTTCATTAAAT GGCTTTGGTAACAATTTTGCAGGGAACTTGGGATTGGAATAGTACCATACAGTCCCCTTGGCCGTGGATTTTTCGGTGGC AAGGCTGTCATAGAAAGTGTACCAGCAAATAGTTTCCTGGTATGGACTTAATCCTTTGTTTCTAATGAATATTTTGCTAT TGCTTGTTCATTGTTGATCAACATCTCTTTTCACCAGGCACTCCAACCAAGGTTACAAGGGGAGAACTTTGACAAGAACA AGATTTTTTATCATAGGCTAGTGAAGTTGGCAGAGAAGCATGGATGTACATCTTCCCAACTTGCTCTTGCGTGGATGTTT CATCAAGGAGATGACGTGGTACCCATCCCTGGTGAGTGATTTCACAGTTTTCAACCTGCACCAAATTTGTTATCTGCGAA GCATATTCACGAGTATAATTTGAATGTAATCAACAATTCAAGTGTTCTCTGAACATATATATGAAATTATGAACCCTCTT CCCTTCATCTTAAGCTCATAACATACTAGAAAATTGAGAGTCCTTTCAATTGTGAATTTTTTTGCTTGTAGATAACATTT CTGCAACTCTCATGTATTGTAGGAACAACTAAGATAAAAAATCTTGATAGTAACATCAGTTCATTGGAAGTGAAGCTCAG CGAAGATGATTTGAAGGAAATCGAAGATGCAATGGCAGTATCTGAGGTGGTAGGGGAGCGAACTACTGATGCATTTGTTA AATGTTCATGGAAATTTGCTGACACTCCGGCAAAAGCATAGCTAGATACCAGTTAGGCACTAATCTAGTCTCCGGCAAGA TTAATCGGCATCTGAATAAAACTATTACCTTGTGTGGTGTGCTTTAGCTATGTACATGTTATGCAATCACATGATGAGAT AGATTAAGTTTGATTTGAATCCAAGATTTCCACATCATTGTTACCAGCCAATTTGCTTAATCACAGTTGGATTAATGTTT CCCTGTTTGTTTTCTTTGTCTCGAGTGAGCTGAACTTGTGAGCTAAGATGTCTAATGCCATGCCTTTCTTTTATAATCCC TCTGTTTCTACTTAAAATATTTGTAGATTAAGATTTTAAGGACTGAAAAGTGCGCAAATACTGTTAATTATAGAAAAACT ATTAACCACTATGGTCCCAAATCTTTAAGTGATCACAGCTTTGCCTTTGAACTCCAGGCTTAGCAGTAAAAATCATCACT AAAATTTGCTTCCTCCTACACATGAGTTAGGTTCACCCTCCGACGACATTGGGGAAGATGACGGTGATTGTTTCCTATGA TAGTAGCATATAGATCAAAAAGTTGATTCTCTGATAAGAGACAAAT
CDS sequence (LotjaGi1g1v0780300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGAGATTCCACGAGTGAAGCTTGGAAGCCAAGGCCTTGAGGTTTCCAAGTTGGGATTTGGGTGCATGGGCCTCAC TGGAGTGTATAACTCTCCTCTTCCTGAAGAAGATGGCATCTCCTTGATCAAGTATGCTTTCAGCAAAGGGATCACCTTCT TTGACACATCAGATGTTTATGGCCCTCATGTCAATGAAGTTTTGGTTGGAAAGGCACTCAAGGACTTGCCTCGAGATCAA GTTCAGATTGCCACAAAGTTTGGAATTGTCAAATTTGATTCTGGTAATGTTATAGTGAATGGTACCCCTGAATATGTTCG ATCCTGTTGTGAGGCTAGCCTTCAGCGTCTTGGGGTGCAATACATTGATCTCTATTATCAGCACCGGATTGACACCTCTG TTCCCATTGAGGACACTATGGGTGAGCTTAAGAAGTTGGTCCAAGAGGGAAAGATAAAGTACATAGGATTATCTGAAGCT AGTTCTGGTACAATCAGGAGGGCACATGCTGTTCATCCCATTGCAGCTGTGCAAATGGAATGGTCCATTTGGACTCGTGA AATTGAGGAAGATATTGTTCCGGTTTGCAGGGAACTTGGGATTGGAATAGTACCATACAGTCCCCTTGGCCGTGGATTTT TCGGTGGCAAGGCTGTCATAGAAAGTGTACCAGCAAATAGTTTCCTGGCACTCCAACCAAGGTTACAAGGGGAGAACTTT GACAAGAACAAGATTTTTTATCATAGGCTAGTGAAGTTGGCAGAGAAGCATGGATGTACATCTTCCCAACTTGCTCTTGC GTGGATGTTTCATCAAGGAGATGACGTGGTACCCATCCCTGGAACAACTAAGATAAAAAATCTTGATAGTAACATCAGTT CATTGGAAGTGAAGCTCAGCGAAGATGATTTGAAGGAAATCGAAGATGCAATGGCAGTATCTGAGGTGGTAGGGGAGCGA ACTACTGATGCATTTGTTAAATGTTCATGGAAATTTGCTGACACTCCGGCAAAAGCATAG
Protein sequence (LotjaGi1g1v0780300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGEIPRVKLGSQGLEVSKLGFGCMGLTGVYNSPLPEEDGISLIKYAFSKGITFFDTSDVYGPHVNEVLVGKALKDLPRDQ VQIATKFGIVKFDSGNVIVNGTPEYVRSCCEASLQRLGVQYIDLYYQHRIDTSVPIEDTMGELKKLVQEGKIKYIGLSEA SSGTIRRAHAVHPIAAVQMEWSIWTREIEEDIVPVCRELGIGIVPYSPLGRGFFGGKAVIESVPANSFLALQPRLQGENF DKNKIFYHRLVKLAEKHGCTSSQLALAWMFHQGDDVVPIPGTTKIKNLDSNISSLEVKLSEDDLKEIEDAMAVSEVVGER TTDAFVKCSWKFADTPAKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 338 | 337 | 5.9E-210 | – | |
| PANTHER | 2 | 338 | 337 | 5.9E-210 | – | |
| Gene3D | 4 | 339 | 336 | 2.0E-133 | ||
| CDD | 6 | 310 | 305 | 5.24209E-113 | ||
| SUPERFAMILY | 6 | 310 | 305 | 4.45E-100 | ||
| Pfam | 18 | 311 | 294 | 1.6E-76 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0780300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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