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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0788600 |
| Transcript ID | LotjaGi1g1v0788600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-dependent lipid-binding (CaLB domain) family protein; TAIR: AT4G01200.1 Calcium-dependent lipid-binding (CaLB domain) family protein; Swiss-Prot: sp|Q58FX0|BAP2_ARATH BON1-associated protein 2; TrEMBL-Plants: tr|A0A0L9VL58|A0A0L9VL58_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0788600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:136110968..136112217) extracted from Lotus japonicus Gifu genome v1.2.
CCACTCTCTGAAAACACCATATTCTCTCTCTCTCAACTCACTTGACACCTCACCTCACCGTTGATTCTTTCTTGAACCAT CTTGTCCGTTGATCTCGCCGGAGATTCAAGAAAGAGTAGAGATGGTGCACTAGCATTCTAGAGAGAGAGTTAGAGAGAGA AACAATGCCGTCGCCGGCGAAGAAGACGCCGCCGCAGCAGCAGCAGCTAGTGTTGGAGATCAACTTGATCTCGGCACAGG GCCTCAAGCCCCCTTCCTCTCTCCGCCGGAGGCTACAAACCTACGCCGTCACGTGGATCGACCCTTCCATGAAGCTCCGA ACACGAGTCGACAAAATCGGCGGCCAGAACCCTACCTGGAACGACAAGTTCCTCTTCCGCGTCACGCCGGAGTATGTTGC TAGCGAGACCTCTGGAATTTCAGTCGCCATCTACGCCGTCGGGACCTTCCGCGACCACCTCGTCGGCACCGTGAGGTTCC TGATCAGCAACATTGTGTCTCCCGGCACGCCGCGCTTCACCTTCACCGCCGTCCAGATACAGCGGCCGTCGGGGAGGTTT GACGGCGTGATGAACATCGGCGCGATGGTGATAGACGGCTCGTCAGGTTTCCCGGCGCTGGAGAAGATATCGGCGATTGG TTACCGCGACCTGATGGGAGAGAAGATGCAGAGCCGGCCGCGGAGGAAGATGAAGTCGAAGTCGAAGGCGGAGGAGAACG AGGAGGTTTCGAGCGAATCTTGTGAGAATTCTTGCACGGAGTCGGTGGATTTGGATGAGGCGGAGTCTTCGACGACGACG TCGTCTTCATCGTCGCCGAGATCGACGGCGGCGGCGACGACGGCGTTGAAGGAGTGGAACGGGGTGAGGGAATTGGCCGG AGCGGGAAAGAAGGGGTTAGCGGGTTCGGGATTCTTGTGCTGCTTGGTGGCCCCCGGTAGTATCCGGTGCCTGGGTCCCA CCACCAACCGCAATGAGTTAGAAAGGTAAAATCATGATCATCGATCACCATAAGAAGAAGAAGAAGTCAAGTACTATAGT CTAGTTTGGTCAACATGATGGACGGTGGAGATTCTCCGTGGCGAATTCACATCTCTAGCTATTCGTGTTTGCCATTTCTC TGTCACTGCCTCTTGTTGTACAGTAGTCTCTGCCTACAGTGTTCTGCTTTTGAAATTTTTTTTAGCTCTAGCTTGTTGCC TTACAATTCAAGCTTTCATAAATACATGAAATTCAAAGTTTGTGCTGGGA
CDS sequence (LotjaGi1g1v0788600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGTCGCCGGCGAAGAAGACGCCGCCGCAGCAGCAGCAGCTAGTGTTGGAGATCAACTTGATCTCGGCACAGGGCCT CAAGCCCCCTTCCTCTCTCCGCCGGAGGCTACAAACCTACGCCGTCACGTGGATCGACCCTTCCATGAAGCTCCGAACAC GAGTCGACAAAATCGGCGGCCAGAACCCTACCTGGAACGACAAGTTCCTCTTCCGCGTCACGCCGGAGTATGTTGCTAGC GAGACCTCTGGAATTTCAGTCGCCATCTACGCCGTCGGGACCTTCCGCGACCACCTCGTCGGCACCGTGAGGTTCCTGAT CAGCAACATTGTGTCTCCCGGCACGCCGCGCTTCACCTTCACCGCCGTCCAGATACAGCGGCCGTCGGGGAGGTTTGACG GCGTGATGAACATCGGCGCGATGGTGATAGACGGCTCGTCAGGTTTCCCGGCGCTGGAGAAGATATCGGCGATTGGTTAC CGCGACCTGATGGGAGAGAAGATGCAGAGCCGGCCGCGGAGGAAGATGAAGTCGAAGTCGAAGGCGGAGGAGAACGAGGA GGTTTCGAGCGAATCTTGTGAGAATTCTTGCACGGAGTCGGTGGATTTGGATGAGGCGGAGTCTTCGACGACGACGTCGT CTTCATCGTCGCCGAGATCGACGGCGGCGGCGACGACGGCGTTGAAGGAGTGGAACGGGGTGAGGGAATTGGCCGGAGCG GGAAAGAAGGGGTTAGCGGGTTCGGGATTCTTGTGCTGCTTGGTGGCCCCCGGTAGTATCCGGTGCCTGGGTCCCACCAC CAACCGCAATGAGTTAGAAAGGTAA
Protein sequence (LotjaGi1g1v0788600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPSPAKKTPPQQQQLVLEINLISAQGLKPPSSLRRRLQTYAVTWIDPSMKLRTRVDKIGGQNPTWNDKFLFRVTPEYVAS ETSGISVAIYAVGTFRDHLVGTVRFLISNIVSPGTPRFTFTAVQIQRPSGRFDGVMNIGAMVIDGSSGFPALEKISAIGY RDLMGEKMQSRPRRKMKSKSKAEENEEVSSESCENSCTESVDLDEAESSTTTSSSSSPRSTAAATTALKEWNGVRELAGA GKKGLAGSGFLCCLVAPGSIRCLGPTTNRNELER
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 9 | 135 | 127 | 4.83E-15 | – | |
| Gene3D | 10 | 209 | 200 | 3.8E-11 | ||
| PANTHER | 14 | 267 | 254 | 1.4E-76 | – | |
| PANTHER | 14 | 267 | 254 | 1.4E-76 | – | |
| SMART | 16 | 119 | 104 | 3.0E-10 | ||
| CDD | 17 | 138 | 122 | 1.20629E-35 | – | |
| Pfam | 17 | 113 | 97 | 1.3E-10 | ||
| ProSiteProfiles | 17 | 104 | 88 | 9.435 | ||
| MobiDBLite | 166 | 188 | 23 | - | – | |
| MobiDBLite | 166 | 224 | 59 | - | – | |
| MobiDBLite | 191 | 224 | 34 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0788600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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