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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0794900 |
| Transcript ID | LotjaGi1g1v0794900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP synthase delta-subunit protein; TAIR: AT4G09650.1 F-type H+-transporting ATPase subunit delta; Swiss-Prot: sp|P11402|ATPD_SPIOL ATP synthase delta chain, chloroplastic; TrEMBL-Plants: tr|I3SWX6|I3SWX6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0794900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:136584553..136585872) extracted from Lotus japonicus Gifu genome v1.2.
TCCGTATTGATACGGAACTTTAAATTCCGTATTTAATAAAGTGGGGTGCAAAGCCTAAGTGGTGGGGCACCAAACTCAAT TCCCCACTACCAGACCTGGTGGCTGAAACTTATCCTCTCATTTGCATCTTCCACAAAAGCCAATACCTAAAAACTTGTCC ATCTTCTCTTCTCTTTCTTCCATGGATCCTTTGACAACCTCTGTTTCTTCAACCCTCAAAATCTCACCATTTCCACCAAC AAACCGTGAGTTCTATTACTTCACAAGAACTCCCTATGCACCACCCACCCGTCCTCCACAACACCATGTCTCCTCCGCTC CCACCGTTCACAACTTGATCCCCAAAATCAAAACTCTATCACACCACAAGTCTTCTTCTTCTCTAGCACCATCCTCCTCA AACACCCCACCTCCCAAAATCAAACCTTCACCTCCAATAATATTCCACCGAAACCCTGCCACTGGTTATGCAGCAGCTGT CATAGACGTGGCTCAGAGCACCAACTCCCTTCACTCTGTTCAAAGGGATGTTCAGAGGCTCTTGAAACTCCTCCAAACTG TGAACTTTGAATCATTTGTGGCTGACCCTTCAAGGATTGAGGAGGTTAGAAGACAAGCTTTGAAGAGGGTGTTGGAGAAG GGAAATTTCCACAGGCATGTGGTTACCATTTTGAAGATGCTGCTGAAGAAGAACAAGTTGGGGATTGTGCAACAAGTGTT GCAAGAGTTTGAAAGGATCTATGATGAGCTTTGTGGGACTCAAGTGGTGTTGGTTTCATCTGAGAAAAAAATGGGGGAAG ATGAATTGTTGGGGATTGTTAAGAGCGTGCAGCAAATGAGTGGAGCAGTGAGGGTGAAGGTAAAAAATTTGGTTCCAGAG AGTTTGGCCTCTTTTGCTGTGTAATGTGAATTGTGTTGTGAAGTGAAAATCACCCTTCATCAGGAGAACTGTAAAAATGT AACTTTACAATTCAATCGCAATATTCAAAGCTCTTATTTTGGTTATTTGATTTCATGTAATGGATTGGATTTGTCCTCAT TAATCAAATAAAGACTTCAATTAGCTGCAAATTTTAGTCTGGATTTCTTTTGTCTGGACAAACACAAAATTTGGTATCTT CATGGCAAATGCAACAACTGACTGCACTGGTTACATATTTTCAGACAATGCAACTTTGAAGCAATTAGAATGGTCTTCTA TCAGTCTATATGGGGAAATTCAGTAGCAATTCCCTCCATATTTAGCCCAAAACCTTTTTACTGTTTAGTTTTGTCTGTCA TGTAGGCTGTAGTTACTCTCTTTTTACTTTGTCATTGGAT
CDS sequence (LotjaGi1g1v0794900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCCTTTGACAACCTCTGTTTCTTCAACCCTCAAAATCTCACCATTTCCACCAACAAACCGTGAGTTCTATTACTT CACAAGAACTCCCTATGCACCACCCACCCGTCCTCCACAACACCATGTCTCCTCCGCTCCCACCGTTCACAACTTGATCC CCAAAATCAAAACTCTATCACACCACAAGTCTTCTTCTTCTCTAGCACCATCCTCCTCAAACACCCCACCTCCCAAAATC AAACCTTCACCTCCAATAATATTCCACCGAAACCCTGCCACTGGTTATGCAGCAGCTGTCATAGACGTGGCTCAGAGCAC CAACTCCCTTCACTCTGTTCAAAGGGATGTTCAGAGGCTCTTGAAACTCCTCCAAACTGTGAACTTTGAATCATTTGTGG CTGACCCTTCAAGGATTGAGGAGGTTAGAAGACAAGCTTTGAAGAGGGTGTTGGAGAAGGGAAATTTCCACAGGCATGTG GTTACCATTTTGAAGATGCTGCTGAAGAAGAACAAGTTGGGGATTGTGCAACAAGTGTTGCAAGAGTTTGAAAGGATCTA TGATGAGCTTTGTGGGACTCAAGTGGTGTTGGTTTCATCTGAGAAAAAAATGGGGGAAGATGAATTGTTGGGGATTGTTA AGAGCGTGCAGCAAATGAGTGGAGCAGTGAGGGTGAAGGTAAAAAATTTGGTTCCAGAGAGTTTGGCCTCTTTTGCTGTG TAA
Protein sequence (LotjaGi1g1v0794900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDPLTTSVSSTLKISPFPPTNREFYYFTRTPYAPPTRPPQHHVSSAPTVHNLIPKIKTLSHHKSSSSLAPSSSNTPPPKI KPSPPIIFHRNPATGYAAAVIDVAQSTNSLHSVQRDVQRLLKLLQTVNFESFVADPSRIEEVRRQALKRVLEKGNFHRHV VTILKMLLKKNKLGIVQQVLQEFERIYDELCGTQVVLVSSEKKMGEDELLGIVKSVQQMSGAVRVKVKNLVPESLASFAV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 239 | 239 | 1.1E-82 | – | |
| PANTHER | 1 | 239 | 239 | 1.1E-82 | ||
| MobiDBLite | 60 | 85 | 26 | - | – | |
| MobiDBLite | 60 | 74 | 15 | - | – | |
| SUPERFAMILY | 93 | 190 | 98 | 1.22E-13 | ||
| Gene3D | 93 | 185 | 93 | 2.9E-12 | ||
| Pfam | 94 | 235 | 142 | 6.5E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | ATP synthesis coupled proton transport | The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis. | ||
| Molecular function | Proton-transporting ATP synthase activity, rotational mechanism | Enables the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism. |
Expression pattern of LotjaGi1g1v0794900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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