Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0797900.1

Overview

Field Value
Gene ID LotjaGi1g1v0797900
Transcript ID LotjaGi1g1v0797900.1
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Soluble inorganic pyrophosphatase; TAIR: AT1G01050.1 pyrophosphorylase 1; Swiss-Prot: sp|Q93V56|IPYR1_ARATH Soluble inorganic pyrophosphatase 1; TrEMBL-Plants: tr|I3T0L7|I3T0L7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0797900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:136811050..136814342) extracted from Lotus japonicus Gifu genome v1.2.

AATGGTTATTATTTAATTGAGTTGTTATCATTTGGCTGCATTGACATGAATACTATGAAACCTTCAAAATCTCAAATGGT GAGTTGCTATTGGTTAGCACAGAAAACGTTTTTTGATGTGTTGGTATTAAGACAATGGAAATCCATATGTAAGCCATAAA TTATGTTTAGACTTTAGAGTGCTATTTGATGTGTTGGTATTAAAACAATGTTGTAGGAGTATGTGATTTGAGAGAACAAT GTTTGTTTTTAAGATGTCAACTTTAATGGTCTTTACTCTCTTCTCTGATATTGTGTATCCTTCAATAATGTGAAGATGCT AAAGTATTCATGTAAGCACATTTTCAATTACATGTAGTACATCACAAACTTAAAAGAAGGATGTTTTATAATTAAAAAAA ATTAAAGGGAAAAAGTCCTGAAAATTGCCTGAGCTTTAATTTTCTTATTTTTAATAACTTGCCTTTCGGAGCTTTATGGT TTATTCATCAGGGGTAAACAAAATTAAATAACAAACTTTGACTTTGAAATTTCAGAAAGAAATAAAATTTAACAAGTGGA GTGGTAAGCTAACATATCTCCTATAAAGTCCCGAGGTATGCTCTAATGAATTGACCAAGTCTCTCTTCTTCCCTTCAACT CTATATATAAATACATCAACCATAACACCTTCTCGGATCTCTCTACCCTTTCATTACAATTTACTCTTGATCAAGGTGCG CTTTTGTTTTTAATTGTTTCAAAAGTTACAACATTGCATGCCAGCCATTTGTGTTATTTGTAGCATATATATATTTGATA TTTGACTTGATATTTGTTTCTAAAGATGAGTGAGAATGGTGAAGAAGGTCAAGACACCCGTCCTGTTCCCCGTTTGAATG AAAGGATTCTTTCATCTTTGTCAAGGAGATCAGTGGCTGCACACCCTTGGCATGATCTTGAAATTGGTACTGTTTGAGTG AAATTGCTTGTTCAAATATATCTTTCCATTTGCTTTCAATTTACATTATAGGACTTGAGCCATGTCCCAAAAACTCTTAA TTTTCTTCATATGCAGGACCTGGAGCTCCCCATATTTTCAATTGTGTAAGTTTTTATCTTTTACTTAATGCCTCATTATC CCGTCTATTCCTATTGCTGGAGAAATAATGCCTTTTTTTTTGAAAGAGAAATATTGTCCAAAATGAGGCAATTATTTTAG GGAAAATCTGTAATGCAACCATTGCACTTGTGCAATAATGTACTATGTGATGAATATTTCACAGAATAATTTATCTCCTC CTAATACAGTACTAGTGCAACAACTGCAATTGCATTCTTGAGCTGAAATTTTCTATTAAGAGGGTGTTTCAGCTAGCTCA ATGGATAGTTTCTTTCTGCAGGTTGTGGAGATAACAAAAGGAAGCAAGGTCAAATATGAACTTGACAAAAAGACTGGATT AATTAAGGTATAGCCTATTGAAATGCTGTGATTCGAAGCAGGATTTTGTTCTTCTTTCCAACCATCTGAATCTGAATAAT GCTCACTCAGGTTGATCGGATATTATATTCATCAGTTGTTTATCCTCATAACTATGGCTTTATCCCTCGCACACTGTGTG ATGACAATGATCCGCTTGATGTCCTGGTTCTCATGCAGGTATTTTGTTAAATGATGTTTACTTGTATAATGTATAGAGTG GCATTGTAAATAGCTCCCTGCTCAAGCTATATTAACCTAGTAATAAGTTATGAAAACCATATCCTATTCTATTTACAGAG TTCCCTCTTTCATTAGCCTTTAAAAGCTGATGCTGAAATTTACACACATTAGGATTATAGAGCTGGAAAATACACTTTTG AGTCATCATAACTGAGTTATGACCTTCACTGAAAAAGACCAAAATGCTAAATCAACTCAAATGCTGCATTATGCATTCTA CCTAGGGGAGAATGAGATCAAATCAGAGTAGAGAGTATTGTATGCTCAATTTAGTGATTTATACAATGAATGTTTTGAAA TTTTAACCATTAGCTAGCACTCATTTAAAAATGTTGAGCACAATAAAAATGTACTTATCTCTAAGCAATGTCTTGATCTT GATGGAATGAAGATCATAGAGTAGGCAATGCCTATTTAAGAATTTCTCCAATGTTTAACCATGTTAGTAAATCCTGCTAG AAGAATTGACTCCAGTCGAAATCAATTCTGAGGAGAAGTTAGTGTGAGTAACTTCGGAGTGTCAGAATTGATTCTAAGAG AAAATAAGTTGATCCAAACATGATACTATCTACAAGGCAATTCATACATTGCTTACTGAATCACTGGTGTTGCAGGAGCC AGTTCTTCCTGGTTGTTTCCTGCGAGCCAGGGCCATTGGACTCATGCCTATGATTGACCAGGTATCTATTTGGCTTTTTG GTCAATAAAACAATTTCCCCTAAAAAAGCTTCCAATTACACTAACAAATTTGTGGTATTGATACAGGGAGAGAGGGATGA TAAAATCATTGCAGTTTGTGCTGATGATCCAGAATACAAGCATTTCTCTGACTTCCAAGAACTTGCACCTCATCGCCTCA CTGAAATCCGACGCTTCTTTGAAGACTGTATCCATCCATCACCTAAATTTATGTTAGTTTTGGTTTATATTTTTATCATA ATTTCAGTGCTATTTCTTAACAATGATATTGCACAGACAAAAAGAATGAGAACAAGGAGGTAGCAGTTAATGATTTTCTA CCACCAAGTGTTGCTGTTGAAGCCATTCAGCACTCAATGTTAGTATATCTCGATCAACTTCATTGCATCGAATTTAGATT AACTTTTAGAGAAATTCCAGTAACAAAATCCTATCATTCTCTTTCACTTTATATGCTCATTCTTATTCCCTCACCTATGT GTGTGTGACAAATATTGTATTATTCTGCAACTTGTCACGCTACTTTAATATCTTATCTCTGATTTCGGTGCAGGGATCTG TACGCGGAATATATTCTGCACACCTTGAGGCGATAGGCAGAAAAGCTATCTCCAATCTCCAGTAATCAGAATAAGCCGCC ATCAACACAGTTTTCAAATATCTATTCATCGACCCTACCTATATTTGTTTTATTTATTTATTTATTTAGTTGGATAATGT ACCACTTGTTTGGTTTATGAAGTGAAATAATGACTCTCAACTGTGACAAGTTGCAGAATACTCAAAATATTGAGGCCAAG AAATGCTAGTAACACCTGTTTTTTACTCTCTAACGCATTCCTTATGAAAAGACTAACCACAATTGGTAACAATAAAAAAA ATATGAAAACGGG
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0797900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAGTGAGAATGGTGAAGAAGGTCAAGACACCCGTCCTGTTCCCCGTTTGAATGAAAGGATTCTTTCATCTTTGTCAAG GAGATCAGTGGCTGCACACCCTTGGCATGATCTTGAAATTGGACCTGGAGCTCCCCATATTTTCAATTGTGTTGTGGAGA TAACAAAAGGAAGCAAGGTCAAATATGAACTTGACAAAAAGACTGGATTAATTAAGGTTGATCGGATATTATATTCATCA GTTGTTTATCCTCATAACTATGGCTTTATCCCTCGCACACTGTGTGATGACAATGATCCGCTTGATGTCCTGGTTCTCAT GCAGGAGCCAGTTCTTCCTGGTTGTTTCCTGCGAGCCAGGGCCATTGGACTCATGCCTATGATTGACCAGGGAGAGAGGG ATGATAAAATCATTGCAGTTTGTGCTGATGATCCAGAATACAAGCATTTCTCTGACTTCCAAGAACTTGCACCTCATCGC CTCACTGAAATCCGACGCTTCTTTGAAGACTACAAAAAGAATGAGAACAAGGAGGTAGCAGTTAATGATTTTCTACCACC AAGTGTTGCTGTTGAAGCCATTCAGCACTCAATGGATCTGTACGCGGAATATATTCTGCACACCTTGAGGCGATAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0797900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSENGEEGQDTRPVPRLNERILSSLSRRSVAAHPWHDLEIGPGAPHIFNCVVEITKGSKVKYELDKKTGLIKVDRILYSS VVYPHNYGFIPRTLCDDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGERDDKIIAVCADDPEYKHFSDFQELAPHR LTEIRRFFEDYKKNENKEVAVNDFLPPSVAVEAIQHSMDLYAEYILHTLRR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10286:SF62
5 211 207 1.3E-132 –
PANTHER
PTHR10286
5 211 207 1.3E-132
IPR008162
SUPERFAMILY
SSF50324
27 207 181 1.7E-69
IPR036649
Gene3D
G3DSA:3.90.80.10
32 211 180 2.6E-77
IPR036649
Hamap
MF_00209
46 202 157 31.227
IPR008162
CDD
cd00412
47 199 153 2.10093E-85
IPR008162
Pfam
PF00719
50 201 152 6.6E-54
IPR008162
ProSitePatterns
PS00387
97 103 7 -
IPR008162

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0004427
Molecular function Inorganic diphosphatase activity Catalysis of the reaction: diphosphate + H(2)O = H(+) + 2 phosphate.
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0006796
Biological process Phosphate-containing compound metabolic process The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0797900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…