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LotjaGi1g1v0797900.2

Overview

Field Value
Gene ID LotjaGi1g1v0797900
Transcript ID LotjaGi1g1v0797900.2
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Soluble inorganic pyrophosphatase; TAIR: AT1G01050.1 pyrophosphorylase 1; Swiss-Prot: sp|Q93V56|IPYR1_ARATH Soluble inorganic pyrophosphatase 1; TrEMBL-Plants: tr|I3T0L7|I3T0L7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0797900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:136811623..136814250) extracted from Lotus japonicus Gifu genome v1.2.

ATATCTCCTATAAAGTCCCGAGGTATGCTCTAATGAATTGACCAAGTCTCTCTTCTTCCCTTCAACTCTATATATAAATA CATCAACCATAACACCTTCTCGGATCTCTCTACCCTTTCATTACAATTTACTCTTGATCAAGGTGCGCTTTTGTTTTTAA TTGTTTCAAAAGTTACAACATTGCATGCCAGCCATTTGTGTTATTTGTAGCATATATATATTTGATATTTGACTTGATAT TTGTTTCTAAAGATGAGTGAGAATGGTGAAGAAGGTCAAGACACCCGTCCTGTTCCCCGTTTGAATGAAAGGATTCTTTC ATCTTTGTCAAGGAGATCAGTGGCTGCACACCCTTGGCATGATCTTGAAATTGGTACTGTTTGAGTGAAATTGCTTGTTC AAATATATCTTTCCATTTGCTTTCAATTTACATTATAGGACTTGAGCCATGTCCCAAAAACTCTTAATTTTCTTCATATG CAGGACCTGGAGCTCCCCATATTTTCAATTGTGTAAGTTTTTATCTTTTACTTAATGCCTCATTATCCCGTCTATTCCTA TTGCTGGAGAAATAATGCCTTTTTTTTTGAAAGAGAAATATTGTCCAAAATGAGGCAATTATTTTAGGGAAAATCTGTAA TGCAACCATTGCACTTGTGCAATAATGTACTATGTGATGAATATTTCACAGAATAATTTATCTCCTCCTAATACAGTACT AGTGCAACAACTGCAATTGCATTCTTGAGCTGAAATTTTCTATTAAGAGGGTGTTTCAGCTAGCTCAATGGATAGTTTCT TTCTGCAGGTTGTGGAGATAACAAAAGGAAGCAAGGTCAAATATGAACTTGACAAAAAGACTGGATTAATTAAGGTATAG CCTATTGAAATGCTGTGATTCGAAGCAGGATTTTGTTCTTCTTTCCAACCATCTGAATCTGAATAATGCTCACTCAGGTT GATCGGATATTATATTCATCAGTTGTTTATCCTCATAACTATGGCTTTATCCCTCGCACACTGTGTGATGACAATGATCC GCTTGATGTCCTGGTTCTCATGCAGGTATTTTGTTAAATGATGTTTACTTGTATAATGTATAGAGTGGCATTGTAAATAG CTCCCTGCTCAAGCTATATTAACCTAGTAATAAGTTATGAAAACCATATCCTATTCTATTTACAGAGTTCCCTCTTTCAT TAGCCTTTAAAAGCTGATGCTGAAATTTACACACATTAGGATTATAGAGCTGGAAAATACACTTTTGAGTCATCATAACT GAGTTATGACCTTCACTGAAAAAGACCAAAATGCTAAATCAACTCAAATGCTGCATTATGCATTCTACCTAGGGGAGAAT GAGATCAAATCAGAGTAGAGAGTATTGTATGCTCAATTTAGTGATTTATACAATGAATGTTTTGAAATTTTAACCATTAG CTAGCACTCATTTAAAAATGTTGAGCACAATAAAAATGTACTTATCTCTAAGCAATGTCTTGATCTTGATGGAATGAAGA TCATAGAGTAGGCAATGCCTATTTAAGAATTTCTCCAATGTTTAACCATGTTAGTAAATCCTGCTAGAAGAATTGACTCC AGTCGAAATCAATTCTGAGGAGAAGTTAGTGTGAGTAACTTCGGAGTGTCAGAATTGATTCTAAGAGAAAATAAGTTGAT CCAAACATGATACTATCTACAAGGCAATTCATACATTGCTTACTGAATCACTGGTGTTGCAGGAGCCAGTTCTTCCTGGT TGTTTCCTGCGAGCCAGGGCCATTGGACTCATGCCTATGATTGACCAGGTATCTATTTGGCTTTTTGGTCAATAAAACAA TTTCCCCTAAAAAAGCTTCCAATTACACTAACAAATTTGTGGTATTGATACAGGGAGAGAGGGATGATAAAATCATTGCA GTTTGTGCTGATGATCCAGAATACAAGCATTTCTCTGACTTCCAAGAACTTGCACCTCATCGCCTCACTGAAATCCGACG CTTCTTTGAAGACTGTATCCATCCATCACCTAAATTTATGTTAGTTTTGGTTTATATTTTTATCATAATTTCAGTGCTAT TTCTTAACAATGATATTGCACAGACAAAAAGAATGAGAACAAGGAGGTAGCAGTTAATGATTTTCTACCACCAAGTGTTG CTGTTGAAGCCATTCAGCACTCAATGTTAGTATATCTCGATCAACTTCATTGCATCGAATTTAGATTAACTTTTAGAGAA ATTCCAGTAACAAAATCCTATCATTCTCTTTCACTTTATATGCTCATTCTTATTCCCTCACCTATGTGTGTGTGACAAAT ATTGTATTATTCTGCAACTTGTCACGCTACTTTAATATCTTATCTCTGATTTCGGTGCAGGGATCTGTACGCGGAATATA TTCTGCACACCTTGAGGCGATAGGCAGAAAAGCTATCTCCAATCTCCAGTAATCAGAATAAGCCGCCATCAACACAGTTT TCAAATATCTATTCATCGACCCTACCTATATTTGTTTTATTTATTTATTTATTTAGTTGGATAATGTACCACTTGTTTGG TTTATGAAGTGAAATAATGACTCTCAACTGTGACAAGTTGCAGAATACTCAAAATATTGAGGCCAAGA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0797900.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAGTGAGAATGGTGAAGAAGGTCAAGACACCCGTCCTGTTCCCCGTTTGAATGAAAGGATTCTTTCATCTTTGTCAAG GAGATCAGTGGCTGCACACCCTTGGCATGATCTTGAAATTGGACCTGGAGCTCCCCATATTTTCAATTGTGTTGTGGAGA TAACAAAAGGAAGCAAGGTCAAATATGAACTTGACAAAAAGACTGGATTAATTAAGGTTGATCGGATATTATATTCATCA GTTGTTTATCCTCATAACTATGGCTTTATCCCTCGCACACTGTGTGATGACAATGATCCGCTTGATGTCCTGGTTCTCAT GCAGGAGCCAGTTCTTCCTGGTTGTTTCCTGCGAGCCAGGGCCATTGGACTCATGCCTATGATTGACCAGGGAGAGAGGG ATGATAAAATCATTGCAGTTTGTGCTGATGATCCAGAATACAAGCATTTCTCTGACTTCCAAGAACTTGCACCTCATCGC CTCACTGAAATCCGACGCTTCTTTGAAGACTACAAAAAGAATGAGAACAAGGAGGTAGCAGTTAATGATTTTCTACCACC AAGTGTTGCTGTTGAAGCCATTCAGCACTCAATGGATCTGTACGCGGAATATATTCTGCACACCTTGAGGCGATAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0797900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSENGEEGQDTRPVPRLNERILSSLSRRSVAAHPWHDLEIGPGAPHIFNCVVEITKGSKVKYELDKKTGLIKVDRILYSS VVYPHNYGFIPRTLCDDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGERDDKIIAVCADDPEYKHFSDFQELAPHR LTEIRRFFEDYKKNENKEVAVNDFLPPSVAVEAIQHSMDLYAEYILHTLRR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10286:SF62
5 211 207 1.3E-132 –
PANTHER
PTHR10286
5 211 207 1.3E-132
IPR008162
SUPERFAMILY
SSF50324
27 207 181 1.7E-69
IPR036649
Gene3D
G3DSA:3.90.80.10
32 211 180 2.6E-77
IPR036649
Hamap
MF_00209
46 202 157 31.227
IPR008162
CDD
cd00412
47 199 153 2.10093E-85
IPR008162
Pfam
PF00719
50 201 152 6.6E-54
IPR008162
ProSitePatterns
PS00387
97 103 7 -
IPR008162

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0004427
Molecular function Inorganic diphosphatase activity Catalysis of the reaction: diphosphate + H(2)O = H(+) + 2 phosphate.
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0006796
Biological process Phosphate-containing compound metabolic process The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0797900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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