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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0797900 |
Transcript ID | LotjaGi1g1v0797900.3 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Soluble inorganic pyrophosphatase; TAIR: AT1G01050.1 pyrophosphorylase 1; Swiss-Prot: sp|Q93V56|IPYR1_ARATH Soluble inorganic pyrophosphatase 1; TrEMBL-Plants: tr|I3T0L7|I3T0L7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0797900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:136811875..136814045) extracted from Lotus japonicus Gifu genome v1.2.
ATGAGTGAGAATGGTGAAGAAGGTCAAGACACCCGTCCTGTTCCCCGTTTGAATGAAAGGATTCTTTCATCTTTGTCAAG GAGATCAGTGGCTGCACACCCTTGGCATGATCTTGAAATTGGTACTGTTTGAGTGAAATTGCTTGTTCAAATATATCTTT CCATTTGCTTTCAATTTACATTATAGGACTTGAGCCATGTCCCAAAAACTCTTAATTTTCTTCATATGCAGGACCTGGAG CTCCCCATATTTTCAATTGTGTAAGTTTTTATCTTTTACTTAATGCCTCATTATCCCGTCTATTCCTATTGCTGGAGAAA TAATGCCTTTTTTTTTGAAAGAGAAATATTGTCCAAAATGAGGCAATTATTTTAGGGAAAATCTGTAATGCAACCATTGC ACTTGTGCAATAATGTACTATGTGATGAATATTTCACAGAATAATTTATCTCCTCCTAATACAGTACTAGTGCAACAACT GCAATTGCATTCTTGAGCTGAAATTTTCTATTAAGAGGGTGTTTCAGCTAGCTCAATGGATAGTTTCTTTCTGCAGGTTG TGGAGATAACAAAAGGAAGCAAGGTCAAATATGAACTTGACAAAAAGACTGGATTAATTAAGGTATAGCCTATTGAAATG CTGTGATTCGAAGCAGGATTTTGTTCTTCTTTCCAACCATCTGAATCTGAATAATGCTCACTCAGGTTGATCGGATATTA TATTCATCAGTTGTTTATCCTCATAACTATGGCTTTATCCCTCGCACACTGTGTGATGACAATGATCCGCTTGATGTCCT GGTTCTCATGCAGGTATTTTGTTAAATGATGTTTACTTGTATAATGTATAGAGTGGCATTGTAAATAGCTCCCTGCTCAA GCTATATTAACCTAGTAATAAGTTATGAAAACCATATCCTATTCTATTTACAGAGTTCCCTCTTTCATTAGCCTTTAAAA GCTGATGCTGAAATTTACACACATTAGGATTATAGAGCTGGAAAATACACTTTTGAGTCATCATAACTGAGTTATGACCT TCACTGAAAAAGACCAAAATGCTAAATCAACTCAAATGCTGCATTATGCATTCTACCTAGGGGAGAATGAGATCAAATCA GAGTAGAGAGTATTGTATGCTCAATTTAGTGATTTATACAATGAATGTTTTGAAATTTTAACCATTAGCTAGCACTCATT TAAAAATGTTGAGCACAATAAAAATGTACTTATCTCTAAGCAATGTCTTGATCTTGATGGAATGAAGATCATAGAGTAGG CAATGCCTATTTAAGAATTTCTCCAATGTTTAACCATGTTAGTAAATCCTGCTAGAAGAATTGACTCCAGTCGAAATCAA TTCTGAGGAGAAGTTAGTGTGAGTAACTTCGGAGTGTCAGAATTGATTCTAAGAGAAAATAAGTTGATCCAAACATGATA CTATCTACAAGGCAATTCATACATTGCTTACTGAATCACTGGTGTTGCAGGAGCCAGTTCTTCCTGGTTGTTTCCTGCGA GCCAGGGCCATTGGACTCATGCCTATGATTGACCAGGTATCTATTTGGCTTTTTGGTCAATAAAACAATTTCCCCTAAAA AAGCTTCCAATTACACTAACAAATTTGTGGTATTGATACAGGGAGAGAGGGATGATAAAATCATTGCAGTTTGTGCTGAT GATCCAGAATACAAGCATTTCTCTGACTTCCAAGAACTTGCACCTCATCGCCTCACTGAAATCCGACGCTTCTTTGAAGA CTGTATCCATCCATCACCTAAATTTATGTTAGTTTTGGTTTATATTTTTATCATAATTTCAGTGCTATTTCTTAACAATG ATATTGCACAGACAAAAAGAATGAGAACAAGGAGGTAGCAGTTAATGATTTTCTACCACCAAGTGTTGCTGTTGAAGCCA TTCAGCACTCAATGTTAGTATATCTCGATCAACTTCATTGCATCGAATTTAGATTAACTTTTAGAGAAATTCCAGTAACA AAATCCTATCATTCTCTTTCACTTTATATGCTCATTCTTATTCCCTCACCTATGTGTGTGTGACAAATATTGTATTATTC TGCAACTTGTCACGCTACTTTAATATCTTATCTCTGATTTCGGTGCAGGGATCTGTACGCGGAATATATTCTGCACACCT TGAGGCGATAG
CDS sequence (LotjaGi1g1v0797900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTGAGAATGGTGAAGAAGGTCAAGACACCCGTCCTGTTCCCCGTTTGAATGAAAGGATTCTTTCATCTTTGTCAAG GAGATCAGTGGCTGCACACCCTTGGCATGATCTTGAAATTGGACCTGGAGCTCCCCATATTTTCAATTGTGTTGTGGAGA TAACAAAAGGAAGCAAGGTCAAATATGAACTTGACAAAAAGACTGGATTAATTAAGGTTGATCGGATATTATATTCATCA GTTGTTTATCCTCATAACTATGGCTTTATCCCTCGCACACTGTGTGATGACAATGATCCGCTTGATGTCCTGGTTCTCAT GCAGGAGCCAGTTCTTCCTGGTTGTTTCCTGCGAGCCAGGGCCATTGGACTCATGCCTATGATTGACCAGGGAGAGAGGG ATGATAAAATCATTGCAGTTTGTGCTGATGATCCAGAATACAAGCATTTCTCTGACTTCCAAGAACTTGCACCTCATCGC CTCACTGAAATCCGACGCTTCTTTGAAGACTACAAAAAGAATGAGAACAAGGAGGTAGCAGTTAATGATTTTCTACCACC AAGTGTTGCTGTTGAAGCCATTCAGCACTCAATGGATCTGTACGCGGAATATATTCTGCACACCTTGAGGCGATAG
Protein sequence (LotjaGi1g1v0797900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSENGEEGQDTRPVPRLNERILSSLSRRSVAAHPWHDLEIGPGAPHIFNCVVEITKGSKVKYELDKKTGLIKVDRILYSS VVYPHNYGFIPRTLCDDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGERDDKIIAVCADDPEYKHFSDFQELAPHR LTEIRRFFEDYKKNENKEVAVNDFLPPSVAVEAIQHSMDLYAEYILHTLRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 5 | 211 | 207 | 1.3E-132 | – | |
PANTHER | 5 | 211 | 207 | 1.3E-132 | ||
SUPERFAMILY | 27 | 207 | 181 | 1.7E-69 | ||
Gene3D | 32 | 211 | 180 | 2.6E-77 | ||
Hamap | 46 | 202 | 157 | 31.227 | ||
CDD | 47 | 199 | 153 | 2.10093E-85 | ||
Pfam | 50 | 201 | 152 | 6.6E-54 | ||
ProSitePatterns | 97 | 103 | 7 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
Molecular function | Inorganic diphosphatase activity | Catalysis of the reaction: diphosphate + H(2)O = H(+) + 2 phosphate. | ||
Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
Biological process | Phosphate-containing compound metabolic process | The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid. |
Expression pattern of LotjaGi1g1v0797900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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