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LotjaGi1g1v0797900.4

Overview

Field Value
Gene ID LotjaGi1g1v0797900
Transcript ID LotjaGi1g1v0797900.4
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Inorganic pyrophosphatase; TAIR: AT2G46860.1 pyrophosphorylase 3; Swiss-Prot: sp|O82793|IPYR3_ARATH Soluble inorganic pyrophosphatase 3; TrEMBL-Plants: tr|M5XDR9|M5XDR9_PRUPE Uncharacterized protein; Found in the gene: LotjaGi1g1v0797900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:136811927..136814045) extracted from Lotus japonicus Gifu genome v1.2.

ATGAAAGGATTCTTTCATCTTTGTCAAGGAGATCAGTGGCTGCACACCCTTGGCATGATCTTGAAATTGGTACTGTTTGA GTGAAATTGCTTGTTCAAATATATCTTTCCATTTGCTTTCAATTTACATTATAGGACTTGAGCCATGTCCCAAAAACTCT TAATTTTCTTCATATGCAGGACCTGGAGCTCCCCATATTTTCAATTGTGTAAGTTTTTATCTTTTACTTAATGCCTCATT ATCCCGTCTATTCCTATTGCTGGAGAAATAATGCCTTTTTTTTTGAAAGAGAAATATTGTCCAAAATGAGGCAATTATTT TAGGGAAAATCTGTAATGCAACCATTGCACTTGTGCAATAATGTACTATGTGATGAATATTTCACAGAATAATTTATCTC CTCCTAATACAGTACTAGTGCAACAACTGCAATTGCATTCTTGAGCTGAAATTTTCTATTAAGAGGGTGTTTCAGCTAGC TCAATGGATAGTTTCTTTCTGCAGGTTGTGGAGATAACAAAAGGAAGCAAGGTCAAATATGAACTTGACAAAAAGACTGG ATTAATTAAGGTATAGCCTATTGAAATGCTGTGATTCGAAGCAGGATTTTGTTCTTCTTTCCAACCATCTGAATCTGAAT AATGCTCACTCAGGTTGATCGGATATTATATTCATCAGTTGTTTATCCTCATAACTATGGCTTTATCCCTCGCACACTGT GTGATGACAATGATCCGCTTGATGTCCTGGTTCTCATGCAGGTATTTTGTTAAATGATGTTTACTTGTATAATGTATAGA GTGGCATTGTAAATAGCTCCCTGCTCAAGCTATATTAACCTAGTAATAAGTTATGAAAACCATATCCTATTCTATTTACA GAGTTCCCTCTTTCATTAGCCTTTAAAAGCTGATGCTGAAATTTACACACATTAGGATTATAGAGCTGGAAAATACACTT TTGAGTCATCATAACTGAGTTATGACCTTCACTGAAAAAGACCAAAATGCTAAATCAACTCAAATGCTGCATTATGCATT CTACCTAGGGGAGAATGAGATCAAATCAGAGTAGAGAGTATTGTATGCTCAATTTAGTGATTTATACAATGAATGTTTTG AAATTTTAACCATTAGCTAGCACTCATTTAAAAATGTTGAGCACAATAAAAATGTACTTATCTCTAAGCAATGTCTTGAT CTTGATGGAATGAAGATCATAGAGTAGGCAATGCCTATTTAAGAATTTCTCCAATGTTTAACCATGTTAGTAAATCCTGC TAGAAGAATTGACTCCAGTCGAAATCAATTCTGAGGAGAAGTTAGTGTGAGTAACTTCGGAGTGTCAGAATTGATTCTAA GAGAAAATAAGTTGATCCAAACATGATACTATCTACAAGGCAATTCATACATTGCTTACTGAATCACTGGTGTTGCAGGA GCCAGTTCTTCCTGGTTGTTTCCTGCGAGCCAGGGCCATTGGACTCATGCCTATGATTGACCAGGTATCTATTTGGCTTT TTGGTCAATAAAACAATTTCCCCTAAAAAAGCTTCCAATTACACTAACAAATTTGTGGTATTGATACAGGGAGAGAGGGA TGATAAAATCATTGCAGTTTGTGCTGATGATCCAGAATACAAGCATTTCTCTGACTTCCAAGAACTTGCACCTCATCGCC TCACTGAAATCCGACGCTTCTTTGAAGACTGTATCCATCCATCACCTAAATTTATGTTAGTTTTGGTTTATATTTTTATC ATAATTTCAGTGCTATTTCTTAACAATGATATTGCACAGACAAAAAGAATGAGAACAAGGAGGTAGCAGTTAATGATTTT CTACCACCAAGTGTTGCTGTTGAAGCCATTCAGCACTCAATGTTAGTATATCTCGATCAACTTCATTGCATCGAATTTAG ATTAACTTTTAGAGAAATTCCAGTAACAAAATCCTATCATTCTCTTTCACTTTATATGCTCATTCTTATTCCCTCACCTA TGTGTGTGTGACAAATATTGTATTATTCTGCAACTTGTCACGCTACTTTAATATCTTATCTCTGATTTCGGTGCAGGGAT CTGTACGCGGAATATATTCTGCACACCTTGAGGCGATAG
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0797900.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAAGGATTCTTTCATCTTTGTCAAGGAGATCAGTGGCTGCACACCCTTGGCATGATCTTGAAATTGGACCTGGAGCT CCCCATATTTTCAATTGTTGTGGAGATAACAAAAGGAAGCAAGGTCAAATATGAACTTGACAAAAAGACTGGATTAATTA AGGTTGATCGGATATTATATTCATCAGTTGTTTATCCTCATAACTATGGCTTTATCCCTCGCACACTGTGTGATGACAAT GATCCGCTTGATGTCCTGGTTCTCATGCAGGAGCCAGTTCTTCCTGGTTGTTTCCTGCGAGCCAGGGCCATTGGACTCAT GCCTATGATTGACCAGGGAGAGAGGGATGATAAAATCATTGCAGTTTGTGCTGATGATCCAGAATACAAGCATTTCTCTG ACTTCCAAGAACTTGCACCTCATCGCCTCACTGAAATCCGACGCTTCTTTGAAGACTACAAAAAGAATGAGAACAAGGAG GTAGCAGTTAATGATTTTCTACCACCAAGTGTTGCTGTTGAAGCCATTCAGCACTCAATGGATCTGTACGCGGAATATAT TCTGCACACCTTGAGGCGATAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0797900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKGFFHLCQGDQWLHTLGMILKLDLELPIFSIVVEITKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCDDN DPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGERDDKIIAVCADDPEYKHFSDFQELAPHRLTEIRRFFEDYKKNENKE VAVNDFLPPSVAVEAIQHSMDLYAEYILHTLRR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.90.80.10
20 193 174 1.0E-69
IPR036649
SUPERFAMILY
SSF50324
23 189 167 1.57E-63
IPR036649
Hamap
MF_00209
28 184 157 31.161
IPR008162
PANTHER
PTHR10286:SF62
29 193 165 1.4E-106 –
CDD
cd00412
29 181 153 6.60334E-83
IPR008162
PANTHER
PTHR10286
29 193 165 1.4E-106
IPR008162
Pfam
PF00719
32 183 152 5.7E-54
IPR008162
ProSitePatterns
PS00387
79 85 7 -
IPR008162

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0004427
Molecular function Inorganic diphosphatase activity Catalysis of the reaction: diphosphate + H(2)O = H(+) + 2 phosphate.
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0006796
Biological process Phosphate-containing compound metabolic process The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0797900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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