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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0799100 |
| Transcript ID | LotjaGi1g1v0799100.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | muscle M-line assembly protein; TAIR: AT1G53800.1 muscle M-line assembly protein; Swiss-Prot: sp|Q39610|DYHA_CHLRE Dynein alpha chain, flagellar outer arm; TrEMBL-Plants: tr|I1JS71|I1JS71_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0799100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:136953520..136958512) extracted from Lotus japonicus Gifu genome v1.2.
CAAATTCGCTTGGTTGGTTATTCTTCCTCTCTCTTTGTCTCTGCTACTGAAATGCTCTTTTATCTCTATCTCTCTATCTA TCTATCTATCTATCTATCTGGGATTCCTCTAAATTAAACTCGCACTCTCGCGGAATCACCTCTCATGCCTTTGCTTGGTT GGTACCTTCTTCTTCTTCTTCTTCCACTTTTCACTCTCATTTCAATTCTTTGTTTTGTGTTATTGTTATCATATCCATGC TGCTAGGTCTGGTTCTTATCTTGTGTTTTGCGGTCAGCAGAGATGACACTGAGGGCGCCTATGCCTTCTTCATATTACCA TGCCGGAAGAGACTCAAGTTGGAAATCCATGGACTTTGACAAGCTTCAAAAGGAGAATTTCAATGTCGGCCGCCTTAACT TGAACAAGTTTCCATTCCTTATTAAGGCAGTTGCTACCTGTGAACCCGACACTTTGCTTCCCAAACACGACAAATGCGAC CTGCTTCCCAATCCTCACTCTTCTCTTGATTTTTCTGACGACGAACCAGAAGTTGCTCTCCAGGACTGCGAAAAGTTGAG AAGAATGAGGATTTCAAAAGCTAATAAAGGCAACATGCCATGGAACAAAGGAAGAAAGCACAGTGCTGGTAATCTTTCCT TTCTACTTCTACTCACTCCTCTCTCTCTCTGTCTTTATTTTTGTTCTAATTTTCAATGTATGAGCAGAAACTATTCAGAA AATCAAGGAAAGAACAAGGCTAGCAATGCAGAATCCTAAGGTGATGTCATGTAAGCATGCTATTGTCTTTATTCAACAAC ATTTTCATATTAACTTCTTCAAAACATGCATTTTATTTTAATTTCAAATCAACATCGCTTACACACTTGTTAGAATTATA CAGGCTCAGCTATCACTTTTTGTGCTCAAAGAAACTGCTCTTAATGGGGAAAATATGCAAAGGATTAAAGCTCAAGAGAA CACAAGTTTGAAGAAACCATTTATATTCTCTCTTAGTGAATGGCCTGCCATTTTTTATATAACTCCTGCTGAAATCACAA ATTTAAATAAAATGCATTGCAAAAATAACTAGTCAACAGCAAGAATTATTTGTAACTATTTTTTCTTACATCAGCTGCTA GGGGCACAATTTTTTAAGTTCTCAGTAATTTGCAGAGTGAAACTTTTCATATTTTATATTGACCTGGATTGGATAGCCAA ATTGAGCTTTTCAAAGCACACTTTATCATCCTCTATTTGTCCCTGCTGTCACTCAACAGTTTCTTAGTATGTTGTAACTT TATAAGTAGGTATTTTCAATTTGGACTAGTTGTATCATAATCTAGGATTACTTGTAGATGAAGATATGGAATTGTTATTT GGATTTTTCAACTTTTGCTTATATAGTTATCTTAATTGCTTTCCTTAATGAAATTCGGTAATGCAGGTCAAATTGAAGTT GAAGAATCTCGGGCATGCACAAACGTAAGCATATGCCTTCCTATGATCATTGTTGTTATTGATAAGCATATGCCTACCCA TAGAATTTTACTGAATTCAGCCTTCTTTATTGGTTGCACAGCACAGAAACGAAACAGAAGATTGGTGCTGGAGTGAAGTT GCGATGGGAAAGGAGGCGTGGAATGAAGGTGGTACAGGAGACTTGCTGCTTTGAGTGGCAAAATTTAATTGCAGAAGGTT CAAGGCAAGGCTATGTTGGTCAGGAAGAGCTGCAATGGAATTCCTATGAAATCTTGGATGAACAGTTGAAGCAGGAGTGG TTGGTGAGTATTGATCAAAGGAAACGAATGCCTGGGGCACCAGGCAGCAAAAGAGCGCCCAAGTCCCCTGAACAGAGGAG GAAAATTGCAGAAGCCATTGCTGCAAAATGGGCTGATCCTGTAAGTATATGTGTAATACCTTGAAGTCGTGTGGTTTATG GTTTTTGTGGTAACTAAATGTTTGCACCATCTTGTGCTCAATTGCACACTATTATATTCTCATAAGTCATAAGACCATAA CTTATTAGTTGTGTGTGATTGACTTCAGAGAAGTTAACACTGTATGTGTGTATCAATTTTTGGTGTCACATCTGTTGATT GAGTTTGTTAAATATAGAGTTTGTTGATTGAATATATTTGATTAGGATAGAGCTTCGTGTGTTATGAAATATAAATTTTC TTTAAAAATAGTGATGAAGTTATAGATTAATTAGGAGTTATTAAATTAGTAGTTTGTTTTTCATCTTTATAAAAAAGGAT TATGCTTTGAGTGAGTTACTCTCAAGCAATTCTGTTAATCATTTCTCCATACGCATATGGTACTAGAGCTATCAGTCTGG CCCGGTTCCTAAAAAACTAAAAACCCTAAAATTCTTTCTAGGATAAATGGAAATATGAAACATTTTCTCAAACCAAACAC ACCCTAAGATTTCATATGTTGCGAGTCTCTCGTAGTTGATTTCCGTAAGCTATCTTGATTAATTAGAATTTGAGGCTGAA TAGTAATATAAGTGTTTTTAGCAGTACAACCTTCCATGTTGACCTGTTTCACAAACTGTCTTCCAATAAATACTGAATAT TGTTAAAAAGTAAGGCCCAGAGTAGGAATGTTTATATAAAAAGTGAATATTGTTAACTACTAAATACTGTTGTTGCCTAC GGAAAGTCATTTGTGATTGGCCTGTATTATGAAAAAGTGAATGTTGATATGCATGTCTTTACTCCACCCTTTAAATCAGG AATACCGCGACAGAGTTTGCTCTGCATTGGCCAAGTATCATGGCATTGAAGCGGGTGCTGAAAGGAAACCTCGAAGAAGA CCAAGTGATGTTGCACGCCCTGCCAAGAGAAAAACAACCACTGATTCTGGCGATAGATTAAAGTCTGGCCCCAAAATTCT TAACCCTATTCGACTCCGAAAAAGCAAATCCCCTGCCTATATAGATCCTTTGGTGAATTCCAAGCTTGAGATGATAAAGA ACATTAGAGCACAGAGAGCTTCTGAAGAAACCAGACAAACTCATGCCATTGAACGAGCAAGGTAAACCCATCTTATTGTG ATCAGTGGTAGAATTTATATTATGTTACTGTGTTCTTTCTCCATTTTTCTGTCAAAATTAAAATTTGGTACCTCTGAGTT CTGATGAACTTTTTTTAATGTGTATTTTGAAGTTAATGGCGTCTTTGTTTCTATTGATTACTTATGCTTTTGTTTGGAAA AAATCATAAATGTATGCTTTTACTTTATTTGGTTCCAACTGCAGCAGTTATGCCGTATATATTTCAAGAAATAATATGTT ATCACAGGCTATTGATTGCTGAGGCTGAGAAAGCTGCCAAGGCTCTTGAGGTTGCTGCGACAAAGAGCTCCATTGCACAG TCTTCTCTCATAGAAACCAGAAAGCTTATAGCTGAAGCTATTCAAACACTTGAATCCATTGATACACAAGGTGTAACTGA GAGTAATGTTCCTTCGGTGGGTTTGGATGAGATCAGTGAGGAAAACGGATCAGCATTCAAAGTTCTAGACCAATCCCAAA TGGCCCAAGTAAATGGACACTCGACATTATCATCAAGTGACTACAAGTTCTCTGAAGATTTTGGTGAGTTTCCCTTGGAG AAACCAGTTATTGGTGATCAAGAACTTCACCTAACCAATGGCTGTGCTTCACTACCTTATACTTTAATTAGCCAGATGAA TGAATCTAGTCCATCAAATGAACAAAGGGAAGCAGAACAGGATCATTGCAGTGAACGCAAAACAGATCCCTCTCCAACTG TGATGGGAACTCAGTCTCTTGAAGATGGGACACTATCTAGATCACCTACTGTAGTAACTAGAAAGTGGGTTCGCGGAAGG CTCGTTGAAGTGGCTGAAGAGGAAAAATAAATTGTGTAAAGCTTAGCTCAGTTTTCAAACACAATACATAGCAATGCCAT ATCTTTCGCTGCATGTTATGTAGATCACCATAAGTACCACATATTTTTATTCCTTGACAGTGTTACAAGTGCTATGCTGC ACTCATTCAAATCATGATTTGCCTCCTATCAGCGCTGCAGCACCCAACCACGTGTAGGAAGGCAGGTGCACTTCTGTCAG TTCACTAGATTTTCTAATTCAGTTAATCATGCTACGTTAAACTATGTATCAATCATATGAATATTTTGTTACATTATAGC TTTGAGTTGGTTTGAGTACTTAATGCTGTAGTTTCGCAGCAACTGCAGAGATTTGAGTGCCAATTGCCTCTCAGCCAGGA AATTCTATTGTAAGAGGGAGGTTGCATGGGTTGACGAATTTTAGTTCTACATTTCTAGAAAGAAAGAAAGAAAACTAGAT ATAATGTTGAATAGTTATGATTATAGATAGATAACCTGTTTCAATTGCGTTTATACTCTTGGAAGTTACAAATACAAAAA GAAAACGAAAAGGCAAGTAAACCACCAACAAGGAGCTCTTGTAGTTGTATCCACCAATCTGATATTGAGAGGATGGGAAA GCTCGCCTTGCAAGACCCTTGGAGACTACTTTGAGAGCAGCTGGTAGGAGTTGAGGAGCAAATGAAGATAAGAGGATTCA GGTTTCATCAGATTTGGTGCTGAGATGGGAGTCTATAGTCTTCTTAATCTGTTTCCTCTTAGCTTCTTTCTCTTCTTTAC CTTTCTGAATATTCTTCTGCACTTCCTCCTTCTGCAATAACAGATAGAGTTGTGAAGACAATACTATTATTAAATAACAA AGAAGCAAAAGAAAATGGAAGATATCGTATGTCGATGATATCAGGAACCGGCGGCTTAACTCCATGGACTGCAGCCCGGT TGGAGGCCTTGGTAGTTAGAGGCTTCCAATAAGTAGCAACAGGACTGTTCCTGTTCAAACTCCAGTAGTTCTTTCCAGTC AACAATAAGTGTCTTGTCCTCTCCATGCTTCTCAACTGAATTGGATTTTGGTCGGGACAAATTTCAATTAGCTTAGCATT TAGCTCCTGTACTGAATAAGCTACAAAGTTAGC
CDS sequence (LotjaGi1g1v0799100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGGTCAAATTGAAGTTGAAGAATCTCGGGCATGCACAAACCACAGAAACGAAACAGAAGATTGGTGCTGGAGTGAA GTTGCGATGGGAAAGGAGGCGTGGAATGAAGGTGGTACAGGAGACTTGCTGCTTTGAGTGGCAAAATTTAATTGCAGAAG GTTCAAGGCAAGGCTATGTTGGTCAGGAAGAGCTGCAATGGAATTCCTATGAAATCTTGGATGAACAGTTGAAGCAGGAG TGGTTGGTGAGTATTGATCAAAGGAAACGAATGCCTGGGGCACCAGGCAGCAAAAGAGCGCCCAAGTCCCCTGAACAGAG GAGGAAAATTGCAGAAGCCATTGCTGCAAAATGGGCTGATCCTGAATACCGCGACAGAGTTTGCTCTGCATTGGCCAAGT ATCATGGCATTGAAGCGGGTGCTGAAAGGAAACCTCGAAGAAGACCAAGTGATGTTGCACGCCCTGCCAAGAGAAAAACA ACCACTGATTCTGGCGATAGATTAAAGTCTGGCCCCAAAATTCTTAACCCTATTCGACTCCGAAAAAGCAAATCCCCTGC CTATATAGATCCTTTGGTGAATTCCAAGCTTGAGATGATAAAGAACATTAGAGCACAGAGAGCTTCTGAAGAAACCAGAC AAACTCATGCCATTGAACGAGCAAGGCTATTGATTGCTGAGGCTGAGAAAGCTGCCAAGGCTCTTGAGGTTGCTGCGACA AAGAGCTCCATTGCACAGTCTTCTCTCATAGAAACCAGAAAGCTTATAGCTGAAGCTATTCAAACACTTGAATCCATTGA TACACAAGGTGTAACTGAGAGTAATGTTCCTTCGGTGGGTTTGGATGAGATCAGTGAGGAAAACGGATCAGCATTCAAAG TTCTAGACCAATCCCAAATGGCCCAAGTAAATGGACACTCGACATTATCATCAAGTGACTACAAGTTCTCTGAAGATTTT GGTGAGTTTCCCTTGGAGAAACCAGTTATTGGTGATCAAGAACTTCACCTAACCAATGGCTGTGCTTCACTACCTTATAC TTTAATTAGCCAGATGAATGAATCTAGTCCATCAAATGAACAAAGGGAAGCAGAACAGGATCATTGCAGTGAACGCAAAA CAGATCCCTCTCCAACTGTGATGGGAACTCAGTCTCTTGAAGATGGGACACTATCTAGATCACCTACTGTAGTAACTAGA AAGTGGGTTCGCGGAAGGCTCGTTGAAGTGGCTGAAGAGGAAAAATAA
Protein sequence (LotjaGi1g1v0799100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQVKLKLKNLGHAQTTETKQKIGAGVKLRWERRRGMKVVQETCCFEWQNLIAEGSRQGYVGQEELQWNSYEILDEQLKQE WLVSIDQRKRMPGAPGSKRAPKSPEQRRKIAEAIAAKWADPEYRDRVCSALAKYHGIEAGAERKPRRRPSDVARPAKRKT TTDSGDRLKSGPKILNPIRLRKSKSPAYIDPLVNSKLEMIKNIRAQRASEETRQTHAIERARLLIAEAEKAAKALEVAAT KSSIAQSSLIETRKLIAEAIQTLESIDTQGVTESNVPSVGLDEISEENGSAFKVLDQSQMAQVNGHSTLSSSDYKFSEDF GEFPLEKPVIGDQELHLTNGCASLPYTLISQMNESSPSNEQREAEQDHCSERKTDPSPTVMGTQSLEDGTLSRSPTVVTR KWVRGRLVEVAEEEK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 414 | 412 | 4.8E-122 | – | |
| PANTHER | 3 | 414 | 412 | 4.8E-122 | – | |
| MobiDBLite | 88 | 107 | 20 | - | – | |
| MobiDBLite | 139 | 166 | 28 | - | – | |
| MobiDBLite | 139 | 173 | 35 | - | – | |
| Coils | 218 | 238 | 21 | - | – | |
| MobiDBLite | 353 | 395 | 43 | - | – | |
| MobiDBLite | 360 | 374 | 15 | - | – | |
| MobiDBLite | 376 | 395 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0799100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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