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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0799100 |
| Transcript ID | LotjaGi1g1v0799100.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | muscle M-line assembly protein; TAIR: AT1G53800.4 muscle M-line assembly protein; Swiss-Prot: sp|Q2GGC4|Y704_EHRCR Probable transcriptional regulatory protein ECH_0704; TrEMBL-Plants: tr|A0A0B2Q9C4|A0A0B2Q9C4_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0799100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:136954107..136958541) extracted from Lotus japonicus Gifu genome v1.2.
GGTCCTTAGCAGTTACTTACGACGTTATCCAAATTCGCTTGGTTGGTTATTCTTCCTCTCTCTTTGTCTCTGCTACTGAA ATGCTCTTTTATCTCTATCTCTCTATCTATCTATCTATCTATCTATCTGGGATTCCTCTAAATTAAACTCGCACTCTCGC GGAATCACCTCTCATGCCTTTGCTTGGTTGGTACCTTCTTCTTCTTCTTCTTCCACTTTTCACTCTCATTTCAATTCTTT GTTTTGTGTTATTGTTATCATATCCATGCTGCTAGGTCTGGTTCTTATCTTGTGTTTTGCGGTCAGCAGAGATGACACTG AGGGCGCCTATGCCTTCTTCATATTACCATGCCGGAAGAGACTCAAGTTGGAAATCCATGGACTTTGACAAGCTTCAAAA GGAGAATTTCAATGTCGGCCGCCTTAACTTGAACAAGTTTCCATTCCTTATTAAGGCAGTTGCTACCTGTGAACCCGACA CTTTGCTTCCCAAACACGACAAATGCGACCTGCTTCCCAATCCTCACTCTTCTCTTGATTTTTCTGACGACGAACCAGAA GTTGCTCTCCAGGACTGCGAAAAGTTGAGAAGAATGAGGATTTCAAAAGCTAATAAAGGCAACATGCCATGGAACAAAGG AAGAAAGCACAGTGCTGGTAATCTTTCCTTTCTACTTCTACTCACTCCTCTCTCTCTCTGTCTTTATTTTTGTTCTAATT TTCAATGTATGAGCAGAAACTATTCAGAAAATCAAGGAAAGAACAAGGCTAGCAATGCAGAATCCTAAGGTGATGTCATG TAAGCATGCTATTGTCTTTATTCAACAACATTTTCATATTAACTTCTTCAAAACATGCATTTTATTTTAATTTCAAATCA ACATCGCTTACACACTTGTTAGAATTATACAGGCTCAGCTATCACTTTTTGTGCTCAAAGAAACTGCTCTTAATGGGGAA AATATGCAAAGGATTAAAGCTCAAGAGAACACAAGTTTGAAGAAACCATTTATATTCTCTCTTAGTGAATGGCCTGCCAT TTTTTATATAACTCCTGCTGAAATCACAAATTTAAATAAAATGCATTGCAAAAATAACTAGTCAACAGCAAGAATTATTT GTAACTATTTTTTCTTACATCAGCTGCTAGGGGCACAATTTTTTAAGTTCTCAGTAATTTGCAGAGTGAAACTTTTCATA TTTTATATTGACCTGGATTGGATAGCCAAATTGAGCTTTTCAAAGCACACTTTATCATCCTCTATTTGTCCCTGCTGTCA CTCAACAGTTTCTTAGTATGTTGTAACTTTATAAGTAGGTATTTTCAATTTGGACTAGTTGTATCATAATCTAGGATTAC TTGTAGATGAAGATATGGAATTGTTATTTGGATTTTTCAACTTTTGCTTATATAGTTATCTTAATTGCTTTCCTTAATGA AATTCGGTAATGCAGGTCAAATTGAAGTTGAAGAATCTCGGGCATGCACAAACGTAAGCATATGCCTTCCTATGATCATT GTTGTTATTGATAAGCATATGCCTACCCATAGAATTTTACTGAATTCAGCCTTCTTTATTGGTTGCACAGCACAGAAACG AAACAGAAGATTGGTGCTGGAGTGAAGTTGCGATGGGAAAGGAGGCGTGGAATGAAGGTGGTACAGGAGACTTGCTGCTT TGAGTGGCAAAATTTAATTGCAGAAGGTTCAAGGCAAGGCTATGTTGGTCAGGAAGAGCTGCAATGGAATTCCTATGAAA TCTTGGATGAACAGTTGAAGCAGGAGTGGTTGGTGAGTATTGATCAAAGGAAACGAATGCCTGGGGCACCAGGCAGCAAA AGAGCGCCCAAGTCCCCTGAACAGAGGAGGAAAATTGCAGAAGCCATTGCTGCAAAATGGGCTGATCCTGTAAGTATATG TGTAATACCTTGAAGTCGTGTGGTTTATGGTTTTTGTGGTAACTAAATGTTTGCACCATCTTGTGCTCAATTGCACACTA TTATATTCTCATAAGTCATAAGACCATAACTTATTAGTTGTGTGTGATTGACTTCAGAGAAGTTAACACTGTATGTGTGT ATCAATTTTTGGTGTCACATCTGTTGATTGAGTTTGTTAAATATAGAGTTTGTTGATTGAATATATTTGATTAGGATAGA GCTTCGTGTGTTATGAAATATAAATTTTCTTTAAAAATAGTGATGAAGTTATAGATTAATTAGGAGTTATTAAATTAGTA GTTTGTTTTTCATCTTTATAAAAAAGGATTATGCTTTGAGTGAGTTACTCTCAAGCAATTCTGTTAATCATTTCTCCATA CGCATATGGTACTAGAGCTATCAGTCTGGCCCGGTTCCTAAAAAACTAAAAACCCTAAAATTCTTTCTAGGATAAATGGA AATATGAAACATTTTCTCAAACCAAACACACCCTAAGATTTCATATGTTGCGAGTCTCTCGTAGTTGATTTCCGTAAGCT ATCTTGATTAATTAGAATTTGAGGCTGAATAGTAATATAAGTGTTTTTAGCAGTACAACCTTCCATGTTGACCTGTTTCA CAAACTGTCTTCCAATAAATACTGAATATTGTTAAAAAGTAAGGCCCAGAGTAGGAATGTTTATATAAAAAGTGAATATT GTTAACTACTAAATACTGTTGTTGCCTACGGAAAGTCATTTGTGATTGGCCTGTATTATGAAAAAGTGAATGTTGATATG CATGTCTTTACTCCACCCTTTAAATCAGGAATACCGCGACAGAGTTTGCTCTGCATTGGCCAAGTATCATGGCATTGAAG CGGGTGCTGAAAGGAAACCTCGAAGAAGACCAAGTGATGTTGCACGCCCTGCCAAGAGAAAAACAACCACTGATTCTGGC GATAGATTAAAGTCTGGCCCCAAAATTCTTAACCCTATTCGACTCCGAAAAAGCAAATCCCCTGCCTATATAGATCCTTT GGTGAATTCCAAGCTTGAGATGATAAAGAACATTAGAGCACAGAGAGCTTCTGAAGAAACCAGACAAACTCATGCCATTG AACGAGCAAGGTAAACCCATCTTATTGTGATCAGTGGTAGAATTTATATTATGTTACTGTGTTCTTTCTCCATTTTTCTG TCAAAATTAAAATTTGGTACCTCTGAGTTCTGATGAACTTTTTTTAATGTGTATTTTGAAGTTAATGGCGTCTTTGTTTC TATTGATTACTTATGCTTTTGTTTGGAAAAAATCATAAATGTATGCTTTTACTTTATTTGGTTCCAACTGCAGCAGTTAT GCCGTATATATTTCAAGAAATAATATGTTATCACAGGCTATTGATTGCTGAGGCTGAGAAAGCTGCCAAGGCTCTTGAGG TTGCTGCGACAAAGAGCTCCATTGCACAGTCTTCTCTCATAGAAACCAGAAAGCTTATAGCTGAAGCTATTCAAACACTT GAATCCATTGATACACAAGGTGTAACTGAGAGTAATGTTCCTTCGGTGGGTTTGGATGAGATCAGTGAGGAAAACGGATC AGCATTCAAAGTTCTAGACCAATCCCAAATGGCCCAAGTAAATGGACACTCGACATTATCATCAAGTGACTACAAGTTCT CTGAAGATTTTGGTGAGTTTCCCTTGGAGAAACCAGTTATTGGTGATCAAGAACTTCACCTAACCAATGGCTGTGCTTCA CTACCTTATACTTTAATTAGCCAGATGAATGAATCTAGTCCATCAAATGAACAAAGGGAAGCAGAACAGGATCATTGCAG TGAACGCAAAACAGATCCCTCTCCAACTGTGATGGGAACTCAGTCTCTTGAAGATGGGACACTATCTAGATCACCTACTG TAGTAACTAGAAAGTGGGTTCGCGGAAGGCTCGTTGAAGTGGCTGAAGAGGAAAAATAAATTGTGTAAAGCTTAGCTCAG TTTTCAAACACAATACATAGCAATGCCATATCTTTCGCTGCATGTTATGTAGATCACCATAAGTACCACATATTTTTATT CCTTGACAGTGTTACAAGTGCTATGCTGCACTCATTCAAATCATGATTTGCCTCCTATCAGCGCTGCAGCACCCAACCAC GTGTAGGAAGGCAGGTGCACTTCTGTCAGTTCACTAGATTTTCTAATTCAGTTAATCATGCTACGTTAAACTATGTATCA ATCATATGAATATTTTGTTACATTATAGCTTTGAGTTGGTTTGAGTACTTAATGCTGTAGTTTCGCAGCAACTGCAGAGA TTTGAGTGCCAATTGCCTCTCAGCCAGGAAATTCTATTGTAAGAGGGAGGTTGCATGGGTTGACGAATTTTAGTTCTACA TTTCTAGAAAGAAAGAAAGAAAACTAGATATAATGTTGAATAGTTATGATTATAGATAGATAACCTGTTTCAATTGCGTT TATACTCTTGGAAGTTACAAATACAAAAAGAAAAC
CDS sequence (LotjaGi1g1v0799100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGTGGTACAGGAGACTTGCTGCTTTGAGTGGCAAAATTTAATTGCAGAAGGTTCAAGGCAAGGCTATGTTGGTCA GGAAGAGCTGCAATGGAATTCCTATGAAATCTTGGATGAACAGTTGAAGCAGGAGTGGTTGGTGAGTATTGATCAAAGGA AACGAATGCCTGGGGCACCAGGCAGCAAAAGAGCGCCCAAGTCCCCTGAACAGAGGAGGAAAATTGCAGAAGCCATTGCT GCAAAATGGGCTGATCCTGAATACCGCGACAGAGTTTGCTCTGCATTGGCCAAGTATCATGGCATTGAAGCGGGTGCTGA AAGGAAACCTCGAAGAAGACCAAGTGATGTTGCACGCCCTGCCAAGAGAAAAACAACCACTGATTCTGGCGATAGATTAA AGTCTGGCCCCAAAATTCTTAACCCTATTCGACTCCGAAAAAGCAAATCCCCTGCCTATATAGATCCTTTGGTGAATTCC AAGCTTGAGATGATAAAGAACATTAGAGCACAGAGAGCTTCTGAAGAAACCAGACAAACTCATGCCATTGAACGAGCAAG GCTATTGATTGCTGAGGCTGAGAAAGCTGCCAAGGCTCTTGAGGTTGCTGCGACAAAGAGCTCCATTGCACAGTCTTCTC TCATAGAAACCAGAAAGCTTATAGCTGAAGCTATTCAAACACTTGAATCCATTGATACACAAGGTGTAACTGAGAGTAAT GTTCCTTCGGTGGGTTTGGATGAGATCAGTGAGGAAAACGGATCAGCATTCAAAGTTCTAGACCAATCCCAAATGGCCCA AGTAAATGGACACTCGACATTATCATCAAGTGACTACAAGTTCTCTGAAGATTTTGGTGAGTTTCCCTTGGAGAAACCAG TTATTGGTGATCAAGAACTTCACCTAACCAATGGCTGTGCTTCACTACCTTATACTTTAATTAGCCAGATGAATGAATCT AGTCCATCAAATGAACAAAGGGAAGCAGAACAGGATCATTGCAGTGAACGCAAAACAGATCCCTCTCCAACTGTGATGGG AACTCAGTCTCTTGAAGATGGGACACTATCTAGATCACCTACTGTAGTAACTAGAAAGTGGGTTCGCGGAAGGCTCGTTG AAGTGGCTGAAGAGGAAAAATAA
Protein sequence (LotjaGi1g1v0799100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKVVQETCCFEWQNLIAEGSRQGYVGQEELQWNSYEILDEQLKQEWLVSIDQRKRMPGAPGSKRAPKSPEQRRKIAEAIA AKWADPEYRDRVCSALAKYHGIEAGAERKPRRRPSDVARPAKRKTTTDSGDRLKSGPKILNPIRLRKSKSPAYIDPLVNS KLEMIKNIRAQRASEETRQTHAIERARLLIAEAEKAAKALEVAATKSSIAQSSLIETRKLIAEAIQTLESIDTQGVTESN VPSVGLDEISEENGSAFKVLDQSQMAQVNGHSTLSSSDYKFSEDFGEFPLEKPVIGDQELHLTNGCASLPYTLISQMNES SPSNEQREAEQDHCSERKTDPSPTVMGTQSLEDGTLSRSPTVVTRKWVRGRLVEVAEEEK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 379 | 377 | 2.8E-108 | – | |
| PANTHER | 3 | 379 | 377 | 2.8E-108 | – | |
| MobiDBLite | 104 | 131 | 28 | - | – | |
| MobiDBLite | 104 | 139 | 36 | - | – | |
| Coils | 183 | 203 | 21 | - | – | |
| MobiDBLite | 318 | 360 | 43 | - | – | |
| MobiDBLite | 325 | 339 | 15 | - | – | |
| MobiDBLite | 341 | 360 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0799100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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