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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0799800 |
| Transcript ID | LotjaGi1g1v0799800.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF936 family protein; TAIR: AT3G14170.1 hypothetical protein (DUF936); Swiss-Prot: sp|A4IJ21|MNS1_XENTR Meiosis-specific nuclear structural protein 1; TrEMBL-Plants: tr|K7KH86|K7KH86_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0799800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:137037820..137043664) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTCAATAAGGAGATCTTAATTTGTAACTCACTTTTTGTGAGCTCGTATTGTCACATAGACATTAAGGCATTCATAAG GTTTTGATGCATATTTCACTCTAGTGGTTGGAGTCTTATTTTACTTTTGATTGGACCCACAATGCCCAATATATTTACAT TATTTATTTCCACTTGATATTAAATTTAATTTAATTATTAATTCAATACAACTTAATTAATATTTAAAAAATAATATATA ATATAATTAAATTTTACCATGATAGGACGAAATATATAATTAATTTTTTTATAAACATCCGGTACCGGTATATAATTAAA ATTCAACATGAGAGAGAAAGCAGATAATTTTACTGAATTATGGTATTGAATGATTGAGAAACAAAAATTATATTTTACTT GAGATCTCACTTATGAAGCTTGCTGAGCTAAGACACGAGATTTCATGCCATGGAAAATAACTCTAATGGTCAAATCTTAT TAAATTCAGATCTTATTTTAAGATCCTAACTTATGATATTCATTGGAGATGCTCTAAGCATTATTTTCAGACTTCAAATG ACGCCACACAAGAAAGTGACATGGGAATATCCTTACCATCCTTAATGGTTACGTTGCCTCTAATCTAAAAACGAAACAAG ACCAGACTGAGCCCCACCGGCAGAGAGACCATAACGTAAATTAAATTGCTAAAAGGGCAAAGCATAGTTTTCTTTTTCTT TATCTTTTTACATGTATCTGAAGGAGCTGATTTGACATTTCCCTTCTCATATAAGTGCTTCATATTTCTCACGCCTAATT ATATAATGGTTCCTTTGGCGTTTAAGCCAAGAGAAATTGATGGTAACGTGCCTAGCATTCAAAGCTTTAGATGTCCTTGG TTAAGCCATTGAGAGGCATTCTGTTTTGGAAGCCAAGCCATTGAGAGGCATTCTCCTCCTCTCAGGTTCTTTCTCTTAAG GCTTCTGTACTACGATGCTCTTTTTCAATGTTTTTCTGCTTGCTTTCCATTTTATTATCCCGGCCTATATTTCATATTTA TGATAAGATTGAGATTTTAAGTTTACCTCAACCAATTACGAGTTTGAAGATAATCAGAGGAAAAGAATGGCATCCCTCAT ACCAGGAGTTCTACTGAAGCTTCTCCAAAGTATGAAATCTAATGTAAAAGTTCGCGGGGAATACCGCTCAGTCCTTCTGC AAGTGATCAGCATAGTCCCTGCATTGTCCGGATCTGAATTATGGCCTAACCAAGGTTTTTTCATTAAAGTCTCAGACTCT TCTCATTCCACCTATGTCTCGCCCTCAAAGGAAGACAATGAGCTTATCTTGAATAATAAGTTGCAGCTTGGCCAATTCTT TTATGTGGATAGGATCGAGGCTGGCACACCCGTCCCAATTCTTATTGGGGTTAGACCAGTTCCTGGACGGCACCCTTTTG AAGGCAACCCTAAGGATTTAATGCAGATGTTGGAGCCATTAGTGCATCCTGATAATTCTACAGTTTATAGTTCAAAATCC ATGGATTTAACAGAAGCCAAAGAGAATCCTAGTTCAAGGCAGAAGATTGTTATTAAAGAGGAAAAGGCTTGTGTTGCATC CAGGTATATGCAGGGTGTTCTGAATCCAAACTCTATAGGAATCAAAGGAAATGATTTAGAGAATGGTGTAGAAGGTAAGA AGGTGAGATCTGCAAAAGGAAGGAAACAAGAGATAAAAGGTCAGGTATGATTCTTGACCTGCAATTTCAATGAAGGCTTT AGACTGTATGGTTGTAAGATTTTACCTCTTCCATGTGGCTATGAAATAGTTGGGAAATGGAAAGCAATCCGACAATAACT ATTGGAACCTCAAACGAAAATTTTGACGTACTATAATTCAATAAACTTAGAAAAACTCTTGTAGACAGATTTTGTTTTCC CTAATAAACAAGCACGTAATGCTACATCCACAAAGAAGGATTGTCATCAGAAGAAATTCTGTAATATCACCACTTCTGTA TAGCAAACATGAAGATTGAGGAAGAAACAGTAGGTGAAAATGATTTAATTTATAGTTTCATTGCACAAATATAATAACAA ACAAAGAGATTGTCATAGAATAAAATATAAACTTAAGAACCAAGGATTGAACTAGTGGTGAGGGGATTGAGTAGTTTACA TGAGCTCATAGATTCAAATTCCACCAAAAATGAATAAAATATAAACTTGAAATTAAAGGAAAGAATAAAGAATCAAGGTT TAAGCTTATTGCTGATGCTATCCTTTGCTAATATAAACAAAAAGATAATGATTGTTTTGGTCATCACAGGTGCTCCCGAT GACTTCAACTCGTTCTCGACGTGAAGCGCTCTCACCAACGCAAGACGTTGGTCAATCTAACAGCCAGCAGACTGTCATGG CACCTTCTACGCACACTTCTAGTTCTACCAAACGCAGTTCTACTAAACAGGAAAATTTAAACTTCAATTTTTTGTCCAGT ATTCAAGATAAAAGCAATCCTGCTGAGGCGATTCTGTGGTCCTCTTTGCCAGCCAAACTATTGAGGCCAGGGAAGGTGCA ATAAATTTTACTTTCTCCCTCTTTAAATAATTACCTCCCTTGTTTAGTTACTTAGCTAATTCAAATGAGATAAATTAGAT TATGATCCCCTCTTTCCACATTATTTTCATTTCAAAGGGAATTCTTAGAAGGAAGCATCTAGCCTCTCAGGTTGTAGTAG AAGCTCAAAAAGAAGCATCTGCAGCATCAGTGATAGTGAAGTGTTTAAGGTAGTTTTAATCTAAAATTTGACACTCATTA GCTACTTAAACGTTTTATGATTTATTGATTCATGAATAAAAAATAAACTTCATTAGCTAACTTGTGGGGAAATGAGTTCT TCATTCCTTTTACGCTTTTCTAACCCTCAGGAATTACCTCTATCTTTCCTTTTCAGTATGTTCGCCAATATCTGTTCTTC TGCAGCATCAGAGAATCCACATGTCATACTGAACAAGTTTTATGGTCTCCAACAGCTCATGGGCCAGTCAAATGGAACAA CTCAGTTGAAAGATAGAACCCTTCAACTGTATAAAATACAACCTCCTGCAGAAAAGCATAAAATTGGCAAAACGACAGGT TTAGTGGTTGCTAAGAGCACGTCAAGGGCTCCAAAACCCTTAACAGAAATATCAGGCACTGAGAAGCAAGAATGGGCCAA AGGGGATGGTATAAAAGAGATCAATGAGCTAAAAGAAGTCATTTTGAATGAAACAAGATCATGGTTTTTTACGTACTTGG AGAAGACATTGGATGCTGGGTTTTATGTGGGCTCACAAGAGAAGGGCAAGGAGAGTAAGGATATTGCAGGGAGACAAATG CTTCAGGCAAACCATATAGCTCTCACATTGTCCCACCTTAAGCATGCAAACAATTGGCTGGACAAACAAAAAAGCAGTTT AGACTCCGAAAGTGAAGGGCTGGTGGAGACAGTTGACAGATTGAAACAAAAAGTTTATTCTTGCTTGCTTGTACATGTTG ATTCTGCTGCATTAGCTTTGGAGAACCAAGTTTGATTCTAGGACAATAAACTGTTTTACAATATACTACATCCCCAATGC TATTTATAAGTTAAATTATATAATTGGTTGAGCCAAGCAGTGACAGTGGAAGCTTGGTTGCTCTGTTTCCAAGGCAATGT GATCTATAATTGGTACTATTTGTACCCAAAAATGAATAAAAAGGGTACGGGTTGAAGTGTAAATTACAAATTGATAGCCA TTTAATTTATGGCTCTTGTTTGTTTATTCAAGCTTAAGTTATTATTTGATATTCTGATGATATCTGTTGTTAAATACCAA GTGTAGCCAGTGAAGCAAATTAGAAAGGTTTGAATTCAAGGAATAGTAGTTCTGTTAACAATGTAATACTAAGTCTGGCA ACCGTAAAACAATACTTAGATATAACGGGAATCCTCAATAGTCAATACGCAATACATTACACACATACAGAACTAGAAAG AACTTACCTTGGGGTTGAGAAATTGAATTATCCAAGCACATTGCCAGAAAACTCCATGATGAAAAGAAACCGAGAAGTTA GCACGGGATTCTTCTTCTTCATAATCAATGTAGGTTGCATGCATAGTATACTATGCTAATGGAAGTTTTAATTAATACTG TCTGAAAGTAAGATTGAGTCGGCCAGGGCGTAGATTTGTTTGTTTCAGCAAGAGGTTGGGGGCAGTGGTTGGGTGAACAG CCGTTACGCCATGAAAGATTTTTCTAGACTTGCCACCAAAAATCAAAACATCTCCAGATTCTAGAACAACCTTTTTGGCC TTGTCCATATCCCTGTCATCACCATACAAAAAGTCAGCTGAGTCTCCGATGGAGAAGGATACCACTGGCAAGCCTTGCTG AAGACTTTGTTCACTTTCATCCTTGTCCTGATGAAGACCGAGCTGGCCGTCTTGTGAGTAAAAGTTGACAATACAAATGT CTGGTGAGATGGAGGGAAGTATGAGTTGTGGATTAGTTTTAGTTTTAGAATGCTGTTGAATGAGGGCATGAGAATCCCGG ATTGCTTCCTGAATCAAGCGGTGGAAATCTGGAGGAATGTGGGGTGGTTTAGCCCCATCAAATGGTCGTTGGAGACTGTA TTGATTTGTCTCAGGATCCCAGTTTTTGCCGAGACACATCATCTTCAAATGCAGTTTTGTGCCATCCCCATAACCTGGCT GGTAGAATCCTCCACTACCCATCCCCAAATCCCTGCACCTTTTGACAATCTTCACCTGATCTATTAATGGGATGTAACCC TTCAAAAGGACCATCCCTTCCCTCAATACTTGTCCTCTTTCACCACGTTGTTTCATTTCGTTCCTTCTTTCTCGGTTCTT TGCAAACAAAGGAGGGTTCAAAACAACGATTCCATCTTGTTTGGGAGGGCATATATCAAAAATGTTCAACTTGGTTTCGC CAGAATCAGATGGCGGAGAAGAATTTTGCTTCTTCTTGTAATCAGATGACGAATTACTACCGCTACCTCCACCACCACCA ACCTACACACAAAGAATTTGAATGAAAACCGTACCAAAAAGACATGACCATAAATAAACAGGAAATATATGTATGTATGT AGGTATGTACTGCTGCTGGTGAATTGGGAGGAATAGGATGTTTGAATGGAGAAGAGCAACGCCCCCGATCACGACCACGA CCGTCCATAGCGCTGCCGCCGCTGTACTCTCCTCTATTTTCTAAACTACCTTACGCCTCTACTCTACACAGTACACTGTC TCTTATAATTTATTTAGTCTGTTTCACTGCCTCCAAGTTAACCATTCATCTTCTGTTTGTACGGGGAGAGAAAACGACGA CAGAAATTGGGGAATTGGGTTTGGGGCCCTATAGGCTCCGCGCCCCACTTAAAGTGGGGAAATTACTGGAAAGCCTCCCT TTAATAGAATACGGAAAATTACATTCCGTATTCAATACGGAAGATAAAGTTCCGTATTATATTAGTATGTAAACGACAAG GGTTTTTTCAAAACCCATTTCAGCGCTCCAAACTCATTTCAAACCCAATTCCCAACCCTTGCTCTTCAATCTTCGAGACC GACGCTCTCCTTGCTTCAATCATCATCTGGAAAGGGTTCCATCATCTCCATCAAAGCTATTCATCAAACTCATTCTCCCC ATTCATTGCATTGAAACCTAGATGTAAGTAAGTTTGGATTTTCACCATTTAACTTGAAATTATGTGAATCTTTCAACCCT AGGGTAGTCGATTGATGCTTAAGTAGATGTTATGTTGGCTGAAATGGTATAAATTGGCCTTGGGGCGAGTTCCAATCATG CAATG
CDS sequence (LotjaGi1g1v0799800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCCCTCATACCAGGAGTTCTACTGAAGCTTCTCCAAAGTATGAAATCTAATGTAAAAGTTCGCGGGGAATACCG CTCAGTCCTTCTGCAAGTGATCAGCATAGTCCCTGCATTGTCCGGATCTGAATTATGGCCTAACCAAGGTTTTTTCATTA AAGTCTCAGACTCTTCTCATTCCACCTATGTCTCGCCCTCAAAGGAAGACAATGAGCTTATCTTGAATAATAAGTTGCAG CTTGGCCAATTCTTTTATGTGGATAGGATCGAGGCTGGCACACCCGTCCCAATTCTTATTGGGGTTAGACCAGTTCCTGG ACGGCACCCTTTTGAAGGCAACCCTAAGGATTTAATGCAGATGTTGGAGCCATTAGTGCATCCTGATAATTCTACAGTTT ATAGTTCAAAATCCATGGATTTAACAGAAGCCAAAGAGAATCCTAGTTCAAGGCAGAAGATTGTTATTAAAGAGGAAAAG GCTTGTGTTGCATCCAGGTATATGCAGGGTGTTCTGAATCCAAACTCTATAGGAATCAAAGGAAATGATTTAGAGAATGG TGTAGAAGGTAAGAAGGTGAGATCTGCAAAAGGAAGGAAACAAGAGATAAAAGGTCAGGTGCTCCCGATGACTTCAACTC GTTCTCGACGTGAAGCGCTCTCACCAACGCAAGACGTTGGTCAATCTAACAGCCAGCAGACTGTCATGGCACCTTCTACG CACACTTCTAGTTCTACCAAACGCAGTTCTACTAAACAGGAAAATTTAAACTTCAATTTTTTGTCCAGTATTCAAGATAA AAGCAATCCTGCTGAGGCGATTCTGTGGTCCTCTTTGCCAGCCAAACTATTGAGGCCAGGGAAGGGAATTCTTAGAAGGA AGCATCTAGCCTCTCAGGTTGTAGTAGAAGCTCAAAAAGAAGCATCTGCAGCATCAGTGATAGTGAAGTGTTTAAGTATG TTCGCCAATATCTGTTCTTCTGCAGCATCAGAGAATCCACATGTCATACTGAACAAGTTTTATGGTCTCCAACAGCTCAT GGGCCAGTCAAATGGAACAACTCAGTTGAAAGATAGAACCCTTCAACTGTATAAAATACAACCTCCTGCAGAAAAGCATA AAATTGGCAAAACGACAGGTTTAGTGGTTGCTAAGAGCACGTCAAGGGCTCCAAAACCCTTAACAGAAATATCAGGCACT GAGAAGCAAGAATGGGCCAAAGGGGATGGTATAAAAGAGATCAATGAGCTAAAAGAAGTCATTTTGAATGAAACAAGATC ATGGTTTTTTACGTACTTGGAGAAGACATTGGATGCTGGGTTTTATGTGGGCTCACAAGAGAAGGGCAAGGAGAGTAAGG ATATTGCAGGGAGACAAATGCTTCAGGCAAACCATATAGCTCTCACATTGTCCCACCTTAAGCATGCAAACAATTGGCTG GACAAACAAAAAAGCAGTTTAGACTCCGAAAGTGAAGGGCTGGTGGAGACAGTTGACAGATTGAAACAAAAAGTTTATTC TTGCTTGCTTGTACATGTTGATTCTGCTGCATTAGCTTTGGAGAACCAAGTTTGA
Protein sequence (LotjaGi1g1v0799800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASLIPGVLLKLLQSMKSNVKVRGEYRSVLLQVISIVPALSGSELWPNQGFFIKVSDSSHSTYVSPSKEDNELILNNKLQ LGQFFYVDRIEAGTPVPILIGVRPVPGRHPFEGNPKDLMQMLEPLVHPDNSTVYSSKSMDLTEAKENPSSRQKIVIKEEK ACVASRYMQGVLNPNSIGIKGNDLENGVEGKKVRSAKGRKQEIKGQVLPMTSTRSRREALSPTQDVGQSNSQQTVMAPST HTSSSTKRSSTKQENLNFNFLSSIQDKSNPAEAILWSSLPAKLLRPGKGILRRKHLASQVVVEAQKEASAASVIVKCLSM FANICSSAASENPHVILNKFYGLQQLMGQSNGTTQLKDRTLQLYKIQPPAEKHKIGKTTGLVVAKSTSRAPKPLTEISGT EKQEWAKGDGIKEINELKEVILNETRSWFFTYLEKTLDAGFYVGSQEKGKESKDIAGRQMLQANHIALTLSHLKHANNWL DKQKSSLDSESEGLVETVDRLKQKVYSCLLVHVDSAALALENQV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 523 | 523 | 1.5E-210 | – | |
| PANTHER | 1 | 523 | 523 | 1.5E-210 | ||
| Pfam | 4 | 160 | 157 | 1.2E-68 | ||
| MobiDBLite | 190 | 252 | 63 | - | – | |
| Pfam | 196 | 355 | 160 | 1.0E-23 | ||
| MobiDBLite | 206 | 252 | 47 | - | – | |
| Pfam | 388 | 520 | 133 | 5.6E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0799800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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