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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0799800 |
| Transcript ID | LotjaGi1g1v0799800.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF936 family protein; TAIR: AT3G14170.1 hypothetical protein (DUF936); Swiss-Prot: sp|Q3ZCN5|OTOGL_HUMAN Otogelin-like protein; TrEMBL-Plants: tr|A0A0B2Q8N0|A0A0B2Q8N0_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0799800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:137038345..137042861) extracted from Lotus japonicus Gifu genome v1.2.
GAGATGCTCTAAGCATTATTTTCAGACTTCAAATGACGCCACACAAGAAAGTGACATGGGAATATCCTTACCATCCTTAA TGGTTACGTTGCCTCTAATCTAAAAACGAAACAAGACCAGACTGAGCCCCACCGGCAGAGAGACCATAACGTAAATTAAA TTGCTAAAAGGGCAAAGCATAGTTTTCTTTTTCTTTATCTTTTTACATGTATCTGAAGGAGCTGATTTGACATTTCCCTT CTCATATAAGTGCTTCATATTTCTCACGCCTAATTATATAATGGTTCCTTTGGCGTTTAAGCCAAGAGAAATTGATGGTA ACGTGCCTAGCATTCAAAGCTTTAGATGTCCTTGGTTAAGCCATTGAGAGGCATTCTGTTTTGGAAGCCAAGCCATTGAG AGGCATTCTCCTCCTCTCAGGTTCTTTCTCTTAAGGCTTCTGTACTACGATGCTCTTTTTCAATGTTTTTCTGCTTGCTT TCCATTTTATTATCCCGGCCTATATTTCATATTTATGATAAGATTGAGATTTTAAGTTTACCTCAACCAATTACGAGTTT GAAGATAATCAGAGGAAAAGAATGGCATCCCTCATACCAGGAGTTCTACTGAAGCTTCTCCAAAGTATGAAATCTAATGT AAAAGTTCGCGGGGAATACCGCTCAGTCCTTCTGCAAGTGATCAGCATAGTCCCTGCATTGTCCGGATCTGAATTATGGC CTAACCAAGGTTTTTTCATTAAAGTCTCAGACTCTTCTCATTCCACCTATGTCTCGCCCTCAAAGGAAGACAATGAGCTT ATCTTGAATAATAAGTTGCAGCTTGGCCAATTCTTTTATGTGGATAGGATCGAGGCTGGCACACCCGTCCCAATTCTTAT TGGGGTTAGACCAGTTCCTGGACGGCACCCTTTTGAAGGCAACCCTAAGGATTTAATGCAGATGTTGGAGCCATTAGTGC ATCCTGATAATTCTACAGTTTATAGTTCAAAATCCATGGATTTAACAGAAGCCAAAGAGAATCCTAGTTCAAGGCAGAAG ATTGTTATTAAAGAGGAAAAGGCTTGTGTTGCATCCAGGTATATGCAGGGTGTTCTGAATCCAAACTCTATAGGAATCAA AGGAAATGATTTAGAGAATGGTGTAGAAGGTAAGAAGGTGAGATCTGCAAAAGGAAGGAAACAAGAGATAAAAGGTCAGG TATGATTCTTGACCTGCAATTTCAATGAAGGCTTTAGACTGTATGGTTGTAAGATTTTACCTCTTCCATGTGGCTATGAA ATAGTTGGGAAATGGAAAGCAATCCGACAATAACTATTGGAACCTCAAACGAAAATTTTGACGTACTATAATTCAATAAA CTTAGAAAAACTCTTGTAGACAGATTTTGTTTTCCCTAATAAACAAGCACGTAATGCTACATCCACAAAGAAGGATTGTC ATCAGAAGAAATTCTGTAATATCACCACTTCTGTATAGCAAACATGAAGATTGAGGAAGAAACAGTAGGTGAAAATGATT TAATTTATAGTTTCATTGCACAAATATAATAACAAACAAAGAGATTGTCATAGAATAAAATATAAACTTAAGAACCAAGG ATTGAACTAGTGGTGAGGGGATTGAGTAGTTTACATGAGCTCATAGATTCAAATTCCACCAAAAATGAATAAAATATAAA CTTGAAATTAAAGGAAAGAATAAAGAATCAAGGTTTAAGCTTATTGCTGATGCTATCCTTTGCTAATATAAACAAAAAGA TAATGATTGTTTTGGTCATCACAGGTGCTCCCGATGACTTCAACTCGTTCTCGACGTGAAGCGCTCTCACCAACGCAAGA CGTTGGTCAATCTAACAGCCAGCAGACTGTCATGGCACCTTCTACGCACACTTCTAGTTCTACCAAACGCAGTTCTACTA AACAGGAAAATTTAAACTTCAATTTTTTGTCCAGTATTCAAGATAAAAGCAATCCTGCTGAGGCGATTCTGTGGTCCTCT TTGCCAGCCAAACTATTGAGGCCAGGGAAGGTGCAATAAATTTTACTTTCTCCCTCTTTAAATAATTACCTCCCTTGTTT AGTTACTTAGCTAATTCAAATGAGATAAATTAGATTATGATCCCCTCTTTCCACATTATTTTCATTTCAAAGGGAATTCT TAGAAGGAAGCATCTAGCCTCTCAGGTTGTAGTAGAAGCTCAAAAAGAAGCATCTGCAGCATCAGTGATAGTGAAGTGTT TAAGGTAGTTTTAATCTAAAATTTGACACTCATTAGCTACTTAAACGTTTTATGATTTATTGATTCATGAATAAAAAATA AACTTCATTAGCTAACTTGTGGGGAAATGAGTTCTTCATTCCTTTTACGCTTTTCTAACCCTCAGGAATTACCTCTATCT TTCCTTTTCAGTATGTTCGCCAATATCTGTTCTTCTGCAGCATCAGAGAATCCACATGTCATACTGAACAAGTTTTATGG TCTCCAACAGCTCATGGGCCAGTCAAATGGAACAACTCAGTTGAAAGATAGAACCCTTCAACTGTATAAAATACAACCTC CTGCAGAAAAGCATAAAATTGGCAAAACGACAGGTTTAGTGGTTGCTAAGAGCACGTCAAGGGCTCCAAAACCCTTAACA GAAATATCAGGCACTGAGAAGCAAGAATGGGCCAAAGGGGATGGTATAAAAGAGATCAATGAGCTAAAAGAAGTCATTTT GAATGAAACAAGATCATGGTTTTTTACGTACTTGGAGAAGACATTGGATGCTGGGTTTTATGTGGGCTCACAAGAGAAGG GCAAGGAGAGTAAGGATATTGCAGGGAGACAAATGCTTCAGGCAAACCATATAGCTCTCACATTGTCCCACCTTAAGCAT GCAAACAATTGGCTGGACAAACAAAAAAGCAGTTTAGACTCCGAAAGTGAAGGGCTGGTGGAGACAGTTGACAGATTGAA ACAAAAAGTTTATTCTTGCTTGCTTGTACATGTTGATTCTGCTGCATTAGCTTTGGAGAACCAAGTTTGATTCTAGGACA ATAAACTGTTTTACAATATACTACATCCCCAATGCTATTTATAAGTTAAATTATATAATTGGTTGAGCCAAGCAGTGACA GTGGAAGCTTGGTTGCTCTGTTTCCAAGGCAATGTGATCTATAATTGGTACTATTTGTACCCAAAAATGAATAAAAAGGG TACGGGTTGAAGTGTAAATTACAAATTGATAGCCATTTAATTTATGGCTCTTGTTTGTTTATTCAAGCTTAAGTTATTAT TTGATATTCTGATGATATCTGTTGTTAAATACCAAGTGTAGCCAGTGAAGCAAATTAGAAAGGTTTGAATTCAAGGAATA GTAGTTCTGTTAACAATGTAATACTAAGTCTGGCAACCGTAAAACAATACTTAGATATAACGGGAATCCTCAATAGTCAA TACGCAATACATTACACACATACAGAACTAGAAAGAACTTACCTTGGGGTTGAGAAATTGAATTATCCAAGCACATTGCC AGAAAACTCCATGATGAAAAGAAACCGAGAAGTTAGCACGGGATTCTTCTTCTTCATAATCAATGTAGGTTGCATGCATA GTATACTATGCTAATGGAAGTTTTAATTAATACTGTCTGAAAGTAAGATTGAGTCGGCCAGGGCGTAGATTTGTTTGTTT CAGCAAGAGGTTGGGGGCAGTGGTTGGGTGAACAGCCGTTACGCCATGAAAGATTTTTCTAGACTTGCCACCAAAAATCA AAACATCTCCAGATTCTAGAACAACCTTTTTGGCCTTGTCCATATCCCTGTCATCACCATACAAAAAGTCAGCTGAGTCT CCGATGGAGAAGGATACCACTGGCAAGCCTTGCTGAAGACTTTGTTCACTTTCATCCTTGTCCTGATGAAGACCGAGCTG GCCGTCTTGTGAGTAAAAGTTGACAATACAAATGTCTGGTGAGATGGAGGGAAGTATGAGTTGTGGATTAGTTTTAGTTT TAGAATGCTGTTGAATGAGGGCATGAGAATCCCGGATTGCTTCCTGAATCAAGCGGTGGAAATCTGGAGGAATGTGGGGT GGTTTAGCCCCATCAAATGGTCGTTGGAGACTGTATTGATTTGTCTCAGGATCCCAGTTTTTGCCGAGACACATCATCTT CAAATGCAGTTTTGTGCCATCCCCATAACCTGGCTGGTAGAATCCTCCACTACCCATCCCCAAATCCCTGCACCTTTTGA CAATCTTCACCTGATCTATTAATGGGATGTAACCCTTCAAAAGGACCATCCCTTCCCTCAATACTTGTCCTCTTTCACCA CGTTGTTTCATTTCGTTCCTTCTTTCTCGGTTCTTTGCAAACAAAGGAGGGTTCAAAACAACGATTCCATCTTGTTTGGG AGGGCATATATCAAAAATGTTCAACTTGGTTTCGCCAGAATCAGATGGCGGAGAAGAATTTTGCTTCTTCTTGTAATCAG ATGACGAATTACTACCGCTACCTCCACCACCACCAAC
CDS sequence (LotjaGi1g1v0799800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCCCTCATACCAGGAGTTCTACTGAAGCTTCTCCAAAGTATGAAATCTAATGTAAAAGTTCGCGGGGAATACCG CTCAGTCCTTCTGCAAGTGATCAGCATAGTCCCTGCATTGTCCGGATCTGAATTATGGCCTAACCAAGGTTTTTTCATTA AAGTCTCAGACTCTTCTCATTCCACCTATGTCTCGCCCTCAAAGGAAGACAATGAGCTTATCTTGAATAATAAGTTGCAG CTTGGCCAATTCTTTTATGTGGATAGGATCGAGGCTGGCACACCCGTCCCAATTCTTATTGGGGTTAGACCAGTTCCTGG ACGGCACCCTTTTGAAGGCAACCCTAAGGATTTAATGCAGATGTTGGAGCCATTAGTGCATCCTGATAATTCTACAGTTT ATAGTTCAAAATCCATGGATTTAACAGAAGCCAAAGAGAATCCTAGTTCAAGGCAGAAGATTGTTATTAAAGAGGAAAAG GCTTGTGTTGCATCCAGGTATATGCAGGGTGTTCTGAATCCAAACTCTATAGGAATCAAAGGAAATGATTTAGAGAATGG TGTAGAAGGTAAGAAGGTGAGATCTGCAAAAGGAAGGAAACAAGAGATAAAAGGTCAGGTATGA
Protein sequence (LotjaGi1g1v0799800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASLIPGVLLKLLQSMKSNVKVRGEYRSVLLQVISIVPALSGSELWPNQGFFIKVSDSSHSTYVSPSKEDNELILNNKLQ LGQFFYVDRIEAGTPVPILIGVRPVPGRHPFEGNPKDLMQMLEPLVHPDNSTVYSSKSMDLTEAKENPSSRQKIVIKEEK ACVASRYMQGVLNPNSIGIKGNDLENGVEGKKVRSAKGRKQEIKGQV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 206 | 206 | 3.5E-101 | – | |
| PANTHER | 1 | 206 | 206 | 3.5E-101 | ||
| Pfam | 4 | 163 | 160 | 5.8E-70 | ||
| MobiDBLite | 182 | 207 | 26 | - | – | |
| MobiDBLite | 185 | 207 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0799800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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