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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0024200 |
| Transcript ID | LotjaGi2g1v0024200.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Microtubule associated protein family protein, putative, expressed; TAIR: AT2G01910.1 Microtubule associated protein (MAP65/ASE1) family protein; Swiss-Prot: sp|Q9SIS3|MA656_ARATH 65-kDa microtubule-associated protein 6; TrEMBL-Plants: tr|V7C6N2|V7C6N2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0024200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:8286727..8293182) extracted from Lotus japonicus Gifu genome v1.2.
CTGATAAGGGATGTATAGAAAGGCAAACAAAGCTCTTGTAGTATTGGAGAGTGAAAAGCACGCGTGAGTGCAGGAGTATG GAAGAAGAAATATGAAGATTCTATCTTGTGAGGAAAAATTTCTCTCTCACAGACCCTACCCTACACAAAGAAAGGAAAAG AGAGAGAGAGAGAAAAATAGTACAGTATAATGAAGCTTATGCTTTGAGTTCACTACCCACTACAAATCATTGGCGAATGT GCATTAGCAGAATACAATATACAGAAAGAATACAGATCCAATACTTTGCCTCTTTCTTCACCTGCTCCTTCCAAATTCCA ATTTTGGCTGGCGCATTTTAGCATCTAACCACCACCAAACCCTAAAATAAGCATTCTTTCTTTCTTTGCTTTAACTTGAG ATTTTTGTTTTCTCTTCTCACTGGACCAACAATAATCATATCAATCAATCATTATCCTCCCTCCTGAAACACCAAAACAA ACCCACTTCCTCTCTTTCCTTACAGATCCTGTTTTGATAATTTTCCTTCCTTCTCTGTTATTGCCAATTCCAAAGGTTTC AGCTTTTAGATCTGGCTTGCTTCTTTCAAGCAATGGAGATACCCCATGTTTCTTGCTTTCTTCTTTGACTCTTCTTCCCT CTGCTTCTGTAGCTGCATTAACCACTTTTTCACCTTCAAATTATCACTTGTAAATGATGCTTGCCATTGGGAATCCTATC ACTAGCATCCATACCAGCTCTACTTGCACTGCTTTGCTCAAAGAACTTGAGGTCTCTCTCTCTTTTTCTTGTTGAATGAT GTCTTGTTTCCTCTCAGGTCAACTTTTATAGGGTCTCTGTAGGCTGTTTTTTTAAAGGGTAAAGGGGGAGTTGCCTTTGC TCATGAGATTACTGGAAATGGGTAATTGGGAATCTTTACATGGTTACCAGTACTTCAATTAGCATATGGGGTTTTGGGGT AATTGTCAGTTCTGTTGTTTATTATTTTTGTGAGAAATCATTTGCTGCATAAAGAACGAGTCTGGTTTGGTTATAGATAG TTTAAGTTTAAGCCTTTGTAAAGTTCTTTATTTGCTTTTATGTGTTTAACTGAGAAGATAAATATATTGAAAAGTGAAAG GAGAAAAAAAACCATTCATTATCACAATTTTTTGTTACCTTCTTTTTTTGTTTTTGTGTTTTTTTCCTTGGGTTGACAGA CCTCATTATGTGTGCAGCAAATATGGAACGATATTGGGGAGAGTGAGAAGGAGAAAGATCGCATGTTATTTGAACTCGAG AGGGAATGCTTAGAAGTTTACAGGAGAAAGGTTGATGAGGCTGCCAACACCAAGGCGCGCTATCACCAGACTGTTGCAGC CAAGGAAGCAGAGCTTGCAACACTAATGGCTGCCCTTGGCGAACATGATATTCATTCGCCGGTAAAAATAAATGACATGC TTGTATGTCAATTTCAAATGTCAATTTCATGTCTGGCATGTCAGAAGTTGGTTGTTGTCTGGATGTCAAGAAGTAAAGTT TATTGTCAGATTAAGATAGACAAAGAGTTTTTAGATCAACTTGAAATGGCTCCAGTTTGATAGATTGGAGTACGATAATG TTGTTGTTAATGCTTCATCCTCCACTAAATTACCCACACCCTTACGCTGTTATGCTGCAATACGATATACTCAAGAAAGG ATATGAACTAAATGCTTTTATTATGTAGATGTGGCTGCAACGTGTAAATCTTTCAGAATTGTGGATAATTGAGTATATAT GGAATTGTTTTTATGTCATTGGTCCAGGAGATGTCTGTGTTATTTACATGATTATTATTTGTTTAATAATAAGGGGGAAC CTCATGGGCCTAGGAATTAACTTTCTGATCTTTAGGTGCACTTGAGAAGATAAAAGGCTCAATTGTATAATATGCCATCA ACCATCCTGATCTATTTTTGTCTGTCAAATTTACAGATTAAAACAGAGAAGAAATCGGCATCCCTGAAGGAGAAGCTTGC ATCTGTCACACCACTGGTTGAAGAATTGAAGAAGAAAAAGGATGAAAGGTTGAAGCAATTTGCAGATATTAAAGCTCAAA TAGAAAAGATAAGTGGTGAGATTTTTGAAAGCCATCCTGCCAATGATGCTGTGAGCAGCACAACAGTTGCGGAAGAACAG GACTTGTCACTAAGAAGGCTTAATGAATGTCAAACACATCTTCGTACTCTTCAAAAGGAAAAGGTTTGTATTTTCATATT AATTGGCCCTTGAACATCTCATGGCTTGGTTATGAGTGGATAAATGATGGGGTGAATGATTGGTTCAAACAAATATAAAT ACCATATTTTCTTTTCTATGCTCACTTCCTGCATTTCTTTATGGATACCCTTTATTATTATGTTTTTTCCTTTATTTCTT AGTTGTACTTCTGTGCATCCTGGTAATTATTTAAAATGGTTTTGGTGCTCTGAGATGTTGCAATACCCAATAAGGGTTCT GTGCAAGTGCAACTATAATGAGCCTCATACCAATCATTATATTCTTCTATTGCTCATTGTGCATATTCTATGCTTGTTCT TTTCAGTCCGACCGCCTTCAAAAGGTCTTGCAATGTGTGAATGATGTGCATTCTCTCTGTGGTGTGCTTGGGTTGGATTT TGGCCAAACTGTGGGTGATGTGCATCCAAGCTTGCATGGGACTCAGTTGGAACAATCGACTAATATTAGCAATAGCACAT TGGCAGGTCTAGAACAGACCATTGACAAATTGAAAACAGAAAGGAAAGCTAGAATGCAGAAGGTGATTTATATGCCCCAT TCTTATTAGCTTCTAGTTTGTTTGTTGTCGTCTTCCTCTCTCCTTTTCTCTTGCCTGAAATTTAAAGTATACTTTTGAAA ATGCAGCTGAAGGATGTTGTTGCTAAACTATTTGATCTTTGGAATTTGATGGACTCATCAAAAGAAGAGAGAAACTGTTT TCTGAGGATTACTTCTATTGTTAGGATTTCGGAATCAGAACTCACTGAACGAGGTGTTCTTTCGACAGAGATTATAGAGA AGGTTTGCAAGCTCTCTCTGTACACTCACTACTCTTTCTTTTCTATTCATTATCACTAGTTCTTTAGATGTGGAGGAACT AGACTAAAAAGTCCTTTTGCAGGCTTCAGCAGAAGTAGAAAGGCTTGCCAAACTGAAAGCAAGCAGAATGAAGGAACTTG TATTTAAGAAGAGGTCAGAGCTAGAGGAAATTTGTAGACTGACTCATATTGAACCGGATACCAGTACTGCTCCTGAGAAA GCTAGTGCATTAATAGATTCTGGTCCGTTCCCTGTTGTACTGATAGATTATTTATCTATAACTCACTTGTCATTCACTAA TGAAAATTTGGTTTCTTTTCAAATGTACCTTGAAAAGAGCTGACATTATTGAACTTTTTTGGGCAGGTCTGGTTGATCCT TCTGAACTTTTAGCTAACATCGAAGCACAGATAATGAAGGCAAGAGATGAAGCTTTGAGCAGAAAAGAAGTAACAGATAG GATTGATAAGTGGCTTTCTGCCTGTGAAGAGGAGAATTGGCTTGATGAATATAGTCAAGTAAGCCAGGAATTATTGGAGA TTTCTGTCCTTTTTAATTGAAGCTTGATGAATATTTTTTTTGACTACCCTTTTTATTGGAGGTCTCTGACCTTTTTACTG ATTATTGATTGTCGGGGGGGTATTTTTCATCAAACTATAGACTCTTGCATGGACTAGTCAAAATAACTTGTGCAGACTAC ACCATAAAATATTGCTATGTTAGGTGAACTAAAGAATAAATGTTCTGTTGACAAGCAGGAGAGGTGGGTCCAAATATATC AAGATACCTATAAATTATAATTTTGTCGTCACTGAGTTTTCCTGTTTGGATCTGAATATTAGTAGACATGTTAGCTCTCA TGTATTATATTGTTCAAAAATTAATCTGGTGTGGCAATTTATGATACAATATTTTTATTCAGCATACATTAGTACTGCCA CTTATTAGAGACTTGAAAAAGTTCTCCTTTTTCATTGTATTAAATAGTTTAAACTTTATAGTTCCAATAAATGTCATTGC ATTTAATTTAAGAACCACTTTTTTCTGGTAAATCGTTTAGCTTATCTTAAATGGTTCAAACTTTGTACTTTAGTTTTGTA TTTTTATCATGTATACTATTGCATCCACTATATAGTTAACACTTGCAGTTCAAATAAATGTCATGGCATTTAATTCAATG TACTATGAACCACTTTTCCTGGTAGATCATCTAGAGCTCTTTCCCTGACATAATATGAGGAATTTCAGGATAACAATCGG TACAGTGCTGGACGAGGTGCTCATATTAATCTTAAACGCGCTGAACGAGCTAGAGTAACTGTGACCAAAATTCCAGGTAT TGCTTTCATGAACGCCCCACATGTTTATGTTTCTGATAGTGCCATTTGGACCACTCAGATAACAGTTTGTTCTCTTTCCA GCTATGGTTGACAATCTTATAAACAAAACACTTTCCTGGGAAGATGAAAAGAAGACTCATTTTCTATACGATGGGGTGAG CAAAGCGTTGTAAATAATTTTTGGTGGTGTTCTCCCTATTGAATTTAGTTTTTGGCTGCTAAATTTGATTGTCAATATTT TCTGTAGGTACGTTTGGTGTCAATATTGGAGGATTATAAACTGACCAGACATCTCAAAGAAGAAGAAAAGCGACGGCACA AGGTAAATTAACTTGTTTATCCCCTTTTGCTATAATCGTTTGTTATTCATCTACAAATTGGTTTTCGGATATAGTACTTA GTTTAAATTATATAGCCCAATTGTGTATGTTATAAAGATACCATTGTAAAAGTAAAAGAGATTTCTTAAAAAAAATTGCT GAGAAAGTAAAAGCTACTTTTATTTTTCCTTTTTGAATTTTATTGCTGATTGGTGTGTATTTTGTTGAATCTCATAGGAC CAAAAGAAGCTGCAAGATCTACTCCTAAATCAAAAGGAAGCCATGTATGGGTCTAAACCGAGTCCAAGAAAAAGTAACAG CGTTAGAAACACAAATGGGTATCGTGCAAATGGCAATGGGAATGGCAGTGTGTCTTCTATGCCTCCCACACCTCGCCGTA ACTCTGTGAGTGGCGGAACATCTGAACTACTAACACCGCGTTCCTACTCTGGCCGTCATAATGGATATTTCAAAGAAATG AGAAGGTTGTCCACTGCACCTCTCAACTATGTGGCTATATCTAAGGAAGATACCATGTCATATAGTTCTCATTGTGGTTC AGAGCCTGAATCCCCTCCCCAAGTTTAAACTTCAAAACAAAAATGATAAAGGTAAACTGTGGTTCCAATCTGAAACTGTT AAACTTTTTGTTTGCTAATTTCTAAATCTTGATGTTTTATTGATTTGATGATAATCTGGTAATGTTTTTTAACTCGTGCA GGAATAGGCTAAGATGAGATTTTCTTTCTTGGGCTGTGCCTGTAAACATGATTAAAACCAGCGCAAACCTTGTGAATATG GAGAAGGATTGTACACTAGTTATTTGCTTGTAATAAGCTGAGGTATACCTGGACAGTGGTAACTGACATTTGAGGACAGG AAGTAGGGTGTTTATGCTTTTGAAGAACATGATCAGATTCTAAAAGAGTGTTGATACTGGTAGGGATGTTTTAGGACTCC TTTGTAGAGGGGAGATCATACAGTGCTTGACCATGTATTCTATGGGTTTTGTGTGTTCAGTTGTATATATATGTTCAGTG TGATGGTCATTAGTTCATGCAGTAACTCAGATTATTTTGATTCATAATTGTAGGAAAGTTCATGCTATATACCTCATGCC CAATTTGTATGCAAATTTGACATTTTCACTCTCTTCCATTCCACTTCTGCCCATTTATTTTCCTATCTCTTTTTTTTTCT TTTTTTCTTTTTCTATTACATCATCTATTGTATCTCTTCTCCCACTTCTATTTATCTCTCAAGGTGGAGGGTGGAATTTA GGTGTTAATGGATTTTATTGCCATGATTTATGTTTGTTGCTTGTAATCAGTGTTCAATTATTTTGCTGATGGATACAAGC TTGTAGTAGTTTACTTTTGTGAACGTTCGATTTGGATTTTTATGGTTGGTGCCTCATGATTAAGACAGCTGGTTCATAAA GATAGATGACTTTGCCAGCCTCTTGATACTTTCAATTGTGGAATCATTGAAATTGAAAATGTAGTACAGCAATGGATGTG AACTTTTTCTTTCCCGAAGTTGACAGACAGATTTCATATGATGTGTACAATTGTGAAAAATGTTACATGATTAAACGTGG CGTCTACGGTGAGTTCTAAACTAAATGAACCACCATGGTTCAGTTCATAAATTACTAGGGTTGTACCTCTACAATTTGTT TGAATGAATTAAGTAATTTATGAATAAATTCTGTGAGCTATTATGTGTATATAGAC
CDS sequence (LotjaGi2g1v0024200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGCTTGCCATTGGGAATCCTATCACTAGCATCCATACCAGCTCTACTTGCACTGCTTTGCTCAAAGAACTTGAGCA AATATGGAACGATATTGGGGAGAGTGAGAAGGAGAAAGATCGCATGTTATTTGAACTCGAGAGGGAATGCTTAGAAGTTT ACAGGAGAAAGGTTGATGAGGCTGCCAACACCAAGGCGCGCTATCACCAGACTGTTGCAGCCAAGGAAGCAGAGCTTGCA ACACTAATGGCTGCCCTTGGCGAACATGATATTCATTCGCCGATTAAAACAGAGAAGAAATCGGCATCCCTGAAGGAGAA GCTTGCATCTGTCACACCACTGGTTGAAGAATTGAAGAAGAAAAAGGATGAAAGGTTGAAGCAATTTGCAGATATTAAAG CTCAAATAGAAAAGATAAGTGGTGAGATTTTTGAAAGCCATCCTGCCAATGATGCTGTGAGCAGCACAACAGTTGCGGAA GAACAGGACTTGTCACTAAGAAGGCTTAATGAATGTCAAACACATCTTCGTACTCTTCAAAAGGAAAAGTCCGACCGCCT TCAAAAGGTCTTGCAATGTGTGAATGATGTGCATTCTCTCTGTGGTGTGCTTGGGTTGGATTTTGGCCAAACTGTGGGTG ATGTGCATCCAAGCTTGCATGGGACTCAGTTGGAACAATCGACTAATATTAGCAATAGCACATTGGCAGGTCTAGAACAG ACCATTGACAAATTGAAAACAGAAAGGAAAGCTAGAATGCAGAAGCTGAAGGATGTTGTTGCTAAACTATTTGATCTTTG GAATTTGATGGACTCATCAAAAGAAGAGAGAAACTGTTTTCTGAGGATTACTTCTATTGTTAGGATTTCGGAATCAGAAC TCACTGAACGAGGTGTTCTTTCGACAGAGATTATAGAGAAGGCTTCAGCAGAAGTAGAAAGGCTTGCCAAACTGAAAGCA AGCAGAATGAAGGAACTTGTATTTAAGAAGAGGTCAGAGCTAGAGGAAATTTGTAGACTGACTCATATTGAACCGGATAC CAGTACTGCTCCTGAGAAAGCTAGTGCATTAATAGATTCTGGTCTGGTTGATCCTTCTGAACTTTTAGCTAACATCGAAG CACAGATAATGAAGGCAAGAGATGAAGCTTTGAGCAGAAAAGAAGTAACAGATAGGATTGATAAGTGGCTTTCTGCCTGT GAAGAGGAGAATTGGCTTGATGAATATAGTCAAGATAACAATCGGTACAGTGCTGGACGAGGTGCTCATATTAATCTTAA ACGCGCTGAACGAGCTAGAGTAACTGTGACCAAAATTCCAGCTATGGTTGACAATCTTATAAACAAAACACTTTCCTGGG AAGATGAAAAGAAGACTCATTTTCTATACGATGGGGTACGTTTGGTGTCAATATTGGAGGATTATAAACTGACCAGACAT CTCAAAGAAGAAGAAAAGCGACGGCACAAGGACCAAAAGAAGCTGCAAGATCTACTCCTAAATCAAAAGGAAGCCATGTA TGGGTCTAAACCGAGTCCAAGAAAAAGTAACAGCGTTAGAAACACAAATGGGTATCGTGCAAATGGCAATGGGAATGGCA GTGTGTCTTCTATGCCTCCCACACCTCGCCGTAACTCTGTGAGTGGCGGAACATCTGAACTACTAACACCGCGTTCCTAC TCTGGCCGTCATAATGGATATTTCAAAGAAATGAGAAGGTTGTCCACTGCACCTCTCAACTATGTGGCTATATCTAAGGA AGATACCATGTCATATAGTTCTCATTGTGGTTCAGAGCCTGAATCCCCTCCCCAAGTTTAA
Protein sequence (LotjaGi2g1v0024200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMLAIGNPITSIHTSSTCTALLKELEQIWNDIGESEKEKDRMLFELERECLEVYRRKVDEAANTKARYHQTVAAKEAELA TLMAALGEHDIHSPIKTEKKSASLKEKLASVTPLVEELKKKKDERLKQFADIKAQIEKISGEIFESHPANDAVSSTTVAE EQDLSLRRLNECQTHLRTLQKEKSDRLQKVLQCVNDVHSLCGVLGLDFGQTVGDVHPSLHGTQLEQSTNISNSTLAGLEQ TIDKLKTERKARMQKLKDVVAKLFDLWNLMDSSKEERNCFLRITSIVRISESELTERGVLSTEIIEKASAEVERLAKLKA SRMKELVFKKRSELEEICRLTHIEPDTSTAPEKASALIDSGLVDPSELLANIEAQIMKARDEALSRKEVTDRIDKWLSAC EEENWLDEYSQDNNRYSAGRGAHINLKRAERARVTVTKIPAMVDNLINKTLSWEDEKKTHFLYDGVRLVSILEDYKLTRH LKEEEKRRHKDQKKLQDLLLNQKEAMYGSKPSPRKSNSVRNTNGYRANGNGNGSVSSMPPTPRRNSVSGGTSELLTPRSY SGRHNGYFKEMRRLSTAPLNYVAISKEDTMSYSSHCGSEPESPPQV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 600 | 591 | 4.6E-296 | – | |
| PANTHER | 10 | 600 | 591 | 4.6E-296 | ||
| Pfam | 54 | 553 | 500 | 2.8E-86 | – | |
| Coils | 115 | 135 | 21 | - | – | |
| Coils | 235 | 255 | 21 | - | – | |
| Gene3D | 377 | 509 | 133 | 3.6E-24 | – | |
| Coils | 472 | 501 | 30 | - | – | |
| MobiDBLite | 503 | 564 | 62 | - | – | |
| MobiDBLite | 511 | 559 | 49 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Microtubule cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins. | ||
| Molecular function | Microtubule binding | Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers. |
Expression pattern of LotjaGi2g1v0024200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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