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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0024200 |
| Transcript ID | LotjaGi2g1v0024200.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 65-kDa microtubule-associated-like protein; TAIR: AT1G14690.1 microtubule-associated protein 65-7; Swiss-Prot: sp|Q8L836|MA657_ARATH 65-kDa microtubule-associated protein 7; TrEMBL-Plants: tr|A0A151RI95|A0A151RI95_CAJCA Protein regulator of cytokinesis 1; Found in the gene: LotjaGi2g1v0024200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:8287875..8291220) extracted from Lotus japonicus Gifu genome v1.2.
ACAGAGAAGAAATCGGCATCCCTGAAGGAGAAGCTTGCATCTGTCACACCACTGGTTGAAGAATTGAAGAAGAAAAAGGA TGAAAGGTTGAAGCAATTTGCAGATATTAAAGCTCAAATAGAAAAGATAAGTGGTGAGATTTTTGAAAGCCATCCTGCCA ATGATGCTGTGAGCAGCACAACAGTTGCGGAAGAACAGGACTTGTCACTAAGAAGGCTTAATGAATGTCAAACACATCTT CGTACTCTTCAAAAGGAAAAGGTTTGTATTTTCATATTAATTGGCCCTTGAACATCTCATGGCTTGGTTATGAGTGGATA AATGATGGGGTGAATGATTGGTTCAAACAAATATAAATACCATATTTTCTTTTCTATGCTCACTTCCTGCATTTCTTTAT GGATACCCTTTATTATTATGTTTTTTCCTTTATTTCTTAGTTGTACTTCTGTGCATCCTGGTAATTATTTAAAATGGTTT TGGTGCTCTGAGATGTTGCAATACCCAATAAGGGTTCTGTGCAAGTGCAACTATAATGAGCCTCATACCAATCATTATAT TCTTCTATTGCTCATTGTGCATATTCTATGCTTGTTCTTTTCAGTCCGACCGCCTTCAAAAGGTCTTGCAATGTGTGAAT GATGTGCATTCTCTCTGTGGTGTGCTTGGGTTGGATTTTGGCCAAACTGTGGGTGATGTGCATCCAAGCTTGCATGGGAC TCAGTTGGAACAATCGACTAATATTAGCAATAGCACATTGGCAGGTCTAGAACAGACCATTGACAAATTGAAAACAGAAA GGAAAGCTAGAATGCAGAAGGTGATTTATATGCCCCATTCTTATTAGCTTCTAGTTTGTTTGTTGTCGTCTTCCTCTCTC CTTTTCTCTTGCCTGAAATTTAAAGTATACTTTTGAAAATGCAGCTGAAGGATGTTGTTGCTAAACTATTTGATCTTTGG AATTTGATGGACTCATCAAAAGAAGAGAGAAACTGTTTTCTGAGGATTACTTCTATTGTTAGGATTTCGGAATCAGAACT CACTGAACGAGGTGTTCTTTCGACAGAGATTATAGAGAAGGTTTGCAAGCTCTCTCTGTACACTCACTACTCTTTCTTTT CTATTCATTATCACTAGTTCTTTAGATGTGGAGGAACTAGACTAAAAAGTCCTTTTGCAGGCTTCAGCAGAAGTAGAAAG GCTTGCCAAACTGAAAGCAAGCAGAATGAAGGAACTTGTATTTAAGAAGAGGTCAGAGCTAGAGGAAATTTGTAGACTGA CTCATATTGAACCGGATACCAGTACTGCTCCTGAGAAAGCTAGTGCATTAATAGATTCTGGTCCGTTCCCTGTTGTACTG ATAGATTATTTATCTATAACTCACTTGTCATTCACTAATGAAAATTTGGTTTCTTTTCAAATGTACCTTGAAAAGAGCTG ACATTATTGAACTTTTTTGGGCAGGTCTGGTTGATCCTTCTGAACTTTTAGCTAACATCGAAGCACAGATAATGAAGGCA AGAGATGAAGCTTTGAGCAGAAAAGAAGTAACAGATAGGATTGATAAGTGGCTTTCTGCCTGTGAAGAGGAGAATTGGCT TGATGAATATAGTCAAGTAAGCCAGGAATTATTGGAGATTTCTGTCCTTTTTAATTGAAGCTTGATGAATATTTTTTTTG ACTACCCTTTTTATTGGAGGTCTCTGACCTTTTTACTGATTATTGATTGTCGGGGGGGTATTTTTCATCAAACTATAGAC TCTTGCATGGACTAGTCAAAATAACTTGTGCAGACTACACCATAAAATATTGCTATGTTAGGTGAACTAAAGAATAAATG TTCTGTTGACAAGCAGGAGAGGTGGGTCCAAATATATCAAGATACCTATAAATTATAATTTTGTCGTCACTGAGTTTTCC TGTTTGGATCTGAATATTAGTAGACATGTTAGCTCTCATGTATTATATTGTTCAAAAATTAATCTGGTGTGGCAATTTAT GATACAATATTTTTATTCAGCATACATTAGTACTGCCACTTATTAGAGACTTGAAAAAGTTCTCCTTTTTCATTGTATTA AATAGTTTAAACTTTATAGTTCCAATAAATGTCATTGCATTTAATTTAAGAACCACTTTTTTCTGGTAAATCGTTTAGCT TATCTTAAATGGTTCAAACTTTGTACTTTAGTTTTGTATTTTTATCATGTATACTATTGCATCCACTATATAGTTAACAC TTGCAGTTCAAATAAATGTCATGGCATTTAATTCAATGTACTATGAACCACTTTTCCTGGTAGATCATCTAGAGCTCTTT CCCTGACATAATATGAGGAATTTCAGGATAACAATCGGTACAGTGCTGGACGAGGTGCTCATATTAATCTTAAACGCGCT GAACGAGCTAGAGTAACTGTGACCAAAATTCCAGGTATTGCTTTCATGAACGCCCCACATGTTTATGTTTCTGATAGTGC CATTTGGACCACTCAGATAACAGTTTGTTCTCTTTCCAGCTATGGTTGACAATCTTATAAACAAAACACTTTCCTGGGAA GATGAAAAGAAGACTCATTTTCTATACGATGGGGTGAGCAAAGCGTTGTAAATAATTTTTGGTGGTGTTCTCCCTATTGA ATTTAGTTTTTGGCTGCTAAATTTGATTGTCAATATTTTCTGTAGGTACGTTTGGTGTCAATATTGGAGGATTATAAACT GACCAGACATCTCAAAGAAGAAGAAAAGCGACGGCACAAGGTAAATTAACTTGTTTATCCCCTTTTGCTATAATCGTTTG TTATTCATCTACAAATTGGTTTTCGGATATAGTACTTAGTTTAAATTATATAGCCCAATTGTGTATGTTATAAAGATACC ATTGTAAAAGTAAAAGAGATTTCTTAAAAAAAATTGCTGAGAAAGTAAAAGCTACTTTTATTTTTCCTTTTTGAATTTTA TTGCTGATTGGTGTGTATTTTGTTGAATCTCATAGGACCAAAAGAAGCTGCAAGATCTACTCCTAAATCAAAAGGAAGCC ATGTATGGGTCTAAACCGAGTCCAAGAAAAAGTAACAGCGTTAGAAACACAAATGGGTATCGTGCAAATGGCAATGGGAA TGGCAGTGTGTCTTCTATGCCTCCCACACCTCGCCGTAACTCTGTGAGTGGCGGAACATCTGAACTACTAACACCGCGTT CCTACTCTGGCCGTCATAATGGATATTTCAAAGAAATGAGAAGGTTGTCCACTGCACCTCTCAACTATGTGGCTATATCT AAGGAAGATACCATGTCATATAGTTCTCATTGTGGTTCAGAGCCTGAATCCCCTCCCCAAGTTTAA
CDS sequence (LotjaGi2g1v0024200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGAAGCTGAAGGATGTTGTTGCTAAACTATTTGATCTTTGGAATTTGATGGACTCATCAAAAGAAGAGAGAAACTG TTTTCTGAGGATTACTTCTATTGTTAGGATTTCGGAATCAGAACTCACTGAACGAGGTGTTCTTTCGACAGAGATTATAG AGAAGGCTTCAGCAGAAGTAGAAAGGCTTGCCAAACTGAAAGCAAGCAGAATGAAGGAACTTGTATTTAAGAAGAGGTCA GAGCTAGAGGAAATTTGTAGACTGACTCATATTGAACCGGATACCAGTACTGCTCCTGAGAAAGCTAGTGCATTAATAGA TTCTGGTCTGGTTGATCCTTCTGAACTTTTAGCTAACATCGAAGCACAGATAATGAAGGCAAGAGATGAAGCTTTGAGCA GAAAAGAAGTAACAGATAGGATTGATAAGTGGCTTTCTGCCTGTGAAGAGGAGAATTGGCTTGATGAATATAGTCAAGAT AACAATCGGTACAGTGCTGGACGAGGTGCTCATATTAATCTTAAACGCGCTGAACGAGCTAGAGTAACTGTGACCAAAAT TCCAGCTATGGTTGACAATCTTATAAACAAAACACTTTCCTGGGAAGATGAAAAGAAGACTCATTTTCTATACGATGGGG TACGTTTGGTGTCAATATTGGAGGATTATAAACTGACCAGACATCTCAAAGAAGAAGAAAAGCGACGGCACAAGGACCAA AAGAAGCTGCAAGATCTACTCCTAAATCAAAAGGAAGCCATGTATGGGTCTAAACCGAGTCCAAGAAAAAGTAACAGCGT TAGAAACACAAATGGGTATCGTGCAAATGGCAATGGGAATGGCAGTGTGTCTTCTATGCCTCCCACACCTCGCCGTAACT CTGTGAGTGGCGGAACATCTGAACTACTAACACCGCGTTCCTACTCTGGCCGTCATAATGGATATTTCAAAGAAATGAGA AGGTTGTCCACTGCACCTCTCAACTATGTGGCTATATCTAAGGAAGATACCATGTCATATAGTTCTCATTGTGGTTCAGA GCCTGAATCCCCTCCCCAAGTTTAA
Protein sequence (LotjaGi2g1v0024200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQKLKDVVAKLFDLWNLMDSSKEERNCFLRITSIVRISESELTERGVLSTEIIEKASAEVERLAKLKASRMKELVFKKRS ELEEICRLTHIEPDTSTAPEKASALIDSGLVDPSELLANIEAQIMKARDEALSRKEVTDRIDKWLSACEEENWLDEYSQD NNRYSAGRGAHINLKRAERARVTVTKIPAMVDNLINKTLSWEDEKKTHFLYDGVRLVSILEDYKLTRHLKEEEKRRHKDQ KKLQDLLLNQKEAMYGSKPSPRKSNSVRNTNGYRANGNGNGSVSSMPPTPRRNSVSGGTSELLTPRSYSGRHNGYFKEMR RLSTAPLNYVAISKEDTMSYSSHCGSEPESPPQV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 301 | 301 | 4.8E-59 | – | |
| PANTHER | 1 | 348 | 348 | 2.6E-182 | – | |
| PANTHER | 1 | 348 | 348 | 2.6E-182 | ||
| Gene3D | 125 | 257 | 133 | 1.3E-24 | – | |
| Coils | 220 | 249 | 30 | - | – | |
| MobiDBLite | 251 | 312 | 62 | - | – | |
| MobiDBLite | 259 | 307 | 49 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Microtubule cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins. | ||
| Molecular function | Microtubule binding | Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers. |
Expression pattern of LotjaGi2g1v0024200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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