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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0024200 |
| Transcript ID | LotjaGi2g1v0024200.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 65-kDa microtubule-associated-like protein; TAIR: AT2G01910.1 Microtubule associated protein (MAP65/ASE1) family protein; Swiss-Prot: sp|Q9SIS3|MA656_ARATH 65-kDa microtubule-associated protein 6; TrEMBL-Plants: tr|V7C6N2|V7C6N2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0024200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:8287875..8292263) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTTACCAGTACTTCAATTAGCATATGGGGTTTTGGGGTAATTGTCAGTTCTGTTGTTTATTATTTTTGTGAGAAATC ATTTGCTGCATAAAGAACGAGTCTGGTTTGGTTATAGATAGTTTAAGTTTAAGCCTTTGTAAAGTTCTTTATTTGCTTTT ATGTGTTTAACTGAGAAGATAAATATATTGAAAAGTGAAAGGAGAAAAAAAACCATTCATTATCACAATTTTTTGTTACC TTCTTTTTTTGTTTTTGTGTTTTTTTCCTTGGGTTGACAGACCTCATTATGTGTGCAGCAAATATGGAACGATATTGGGG AGAGTGAGAAGGAGAAAGATCGCATGTTATTTGAACTCGAGAGGGAATGCTTAGAAGTTTACAGGAGAAAGGTTGATGAG GCTGCCAACACCAAGGCGCGCTATCACCAGACTGTTGCAGCCAAGGAAGCAGAGCTTGCAACACTAATGGCTGCCCTTGG CGAACATGATATTCATTCGCCGGTAAAAATAAATGACATGCTTGTATGTCAATTTCAAATGTCAATTTCATGTCTGGCAT GTCAGAAGTTGGTTGTTGTCTGGATGTCAAGAAGTAAAGTTTATTGTCAGATTAAGATAGACAAAGAGTTTTTAGATCAA CTTGAAATGGCTCCAGTTTGATAGATTGGAGTACGATAATGTTGTTGTTAATGCTTCATCCTCCACTAAATTACCCACAC CCTTACGCTGTTATGCTGCAATACGATATACTCAAGAAAGGATATGAACTAAATGCTTTTATTATGTAGATGTGGCTGCA ACGTGTAAATCTTTCAGAATTGTGGATAATTGAGTATATATGGAATTGTTTTTATGTCATTGGTCCAGGAGATGTCTGTG TTATTTACATGATTATTATTTGTTTAATAATAAGGGGGAACCTCATGGGCCTAGGAATTAACTTTCTGATCTTTAGGTGC ACTTGAGAAGATAAAAGGCTCAATTGTATAATATGCCATCAACCATCCTGATCTATTTTTGTCTGTCAAATTTACAGATT AAAACAGAGAAGAAATCGGCATCCCTGAAGGAGAAGCTTGCATCTGTCACACCACTGGTTGAAGAATTGAAGAAGAAAAA GGATGAAAGGTTGAAGCAATTTGCAGATATTAAAGCTCAAATAGAAAAGATAAGTGGTGAGATTTTTGAAAGCCATCCTG CCAATGATGCTGTGAGCAGCACAACAGTTGCGGAAGAACAGGACTTGTCACTAAGAAGGCTTAATGAATGTCAAACACAT CTTCGTACTCTTCAAAAGGAAAAGGTTTGTATTTTCATATTAATTGGCCCTTGAACATCTCATGGCTTGGTTATGAGTGG ATAAATGATGGGGTGAATGATTGGTTCAAACAAATATAAATACCATATTTTCTTTTCTATGCTCACTTCCTGCATTTCTT TATGGATACCCTTTATTATTATGTTTTTTCCTTTATTTCTTAGTTGTACTTCTGTGCATCCTGGTAATTATTTAAAATGG TTTTGGTGCTCTGAGATGTTGCAATACCCAATAAGGGTTCTGTGCAAGTGCAACTATAATGAGCCTCATACCAATCATTA TATTCTTCTATTGCTCATTGTGCATATTCTATGCTTGTTCTTTTCAGTCCGACCGCCTTCAAAAGGTCTTGCAATGTGTG AATGATGTGCATTCTCTCTGTGGTGTGCTTGGGTTGGATTTTGGCCAAACTGTGGGTGATGTGCATCCAAGCTTGCATGG GACTCAGTTGGAACAATCGACTAATATTAGCAATAGCACATTGGCAGGTCTAGAACAGACCATTGACAAATTGAAAACAG AAAGGAAAGCTAGAATGCAGAAGGTGATTTATATGCCCCATTCTTATTAGCTTCTAGTTTGTTTGTTGTCGTCTTCCTCT CTCCTTTTCTCTTGCCTGAAATTTAAAGTATACTTTTGAAAATGCAGCTGAAGGATGTTGTTGCTAAACTATTTGATCTT TGGAATTTGATGGACTCATCAAAAGAAGAGAGAAACTGTTTTCTGAGGATTACTTCTATTGTTAGGATTTCGGAATCAGA ACTCACTGAACGAGGTGTTCTTTCGACAGAGATTATAGAGAAGGTTTGCAAGCTCTCTCTGTACACTCACTACTCTTTCT TTTCTATTCATTATCACTAGTTCTTTAGATGTGGAGGAACTAGACTAAAAAGTCCTTTTGCAGGCTTCAGCAGAAGTAGA AAGGCTTGCCAAACTGAAAGCAAGCAGAATGAAGGAACTTGTATTTAAGAAGAGGTCAGAGCTAGAGGAAATTTGTAGAC TGACTCATATTGAACCGGATACCAGTACTGCTCCTGAGAAAGCTAGTGCATTAATAGATTCTGGTCCGTTCCCTGTTGTA CTGATAGATTATTTATCTATAACTCACTTGTCATTCACTAATGAAAATTTGGTTTCTTTTCAAATGTACCTTGAAAAGAG CTGACATTATTGAACTTTTTTGGGCAGGTCTGGTTGATCCTTCTGAACTTTTAGCTAACATCGAAGCACAGATAATGAAG GCAAGAGATGAAGCTTTGAGCAGAAAAGAAGTAACAGATAGGATTGATAAGTGGCTTTCTGCCTGTGAAGAGGAGAATTG GCTTGATGAATATAGTCAAGTAAGCCAGGAATTATTGGAGATTTCTGTCCTTTTTAATTGAAGCTTGATGAATATTTTTT TTGACTACCCTTTTTATTGGAGGTCTCTGACCTTTTTACTGATTATTGATTGTCGGGGGGGTATTTTTCATCAAACTATA GACTCTTGCATGGACTAGTCAAAATAACTTGTGCAGACTACACCATAAAATATTGCTATGTTAGGTGAACTAAAGAATAA ATGTTCTGTTGACAAGCAGGAGAGGTGGGTCCAAATATATCAAGATACCTATAAATTATAATTTTGTCGTCACTGAGTTT TCCTGTTTGGATCTGAATATTAGTAGACATGTTAGCTCTCATGTATTATATTGTTCAAAAATTAATCTGGTGTGGCAATT TATGATACAATATTTTTATTCAGCATACATTAGTACTGCCACTTATTAGAGACTTGAAAAAGTTCTCCTTTTTCATTGTA TTAAATAGTTTAAACTTTATAGTTCCAATAAATGTCATTGCATTTAATTTAAGAACCACTTTTTTCTGGTAAATCGTTTA GCTTATCTTAAATGGTTCAAACTTTGTACTTTAGTTTTGTATTTTTATCATGTATACTATTGCATCCACTATATAGTTAA CACTTGCAGTTCAAATAAATGTCATGGCATTTAATTCAATGTACTATGAACCACTTTTCCTGGTAGATCATCTAGAGCTC TTTCCCTGACATAATATGAGGAATTTCAGGATAACAATCGGTACAGTGCTGGACGAGGTGCTCATATTAATCTTAAACGC GCTGAACGAGCTAGAGTAACTGTGACCAAAATTCCAGGTATTGCTTTCATGAACGCCCCACATGTTTATGTTTCTGATAG TGCCATTTGGACCACTCAGATAACAGTTTGTTCTCTTTCCAGCTATGGTTGACAATCTTATAAACAAAACACTTTCCTGG GAAGATGAAAAGAAGACTCATTTTCTATACGATGGGGTGAGCAAAGCGTTGTAAATAATTTTTGGTGGTGTTCTCCCTAT TGAATTTAGTTTTTGGCTGCTAAATTTGATTGTCAATATTTTCTGTAGGTACGTTTGGTGTCAATATTGGAGGATTATAA ACTGACCAGACATCTCAAAGAAGAAGAAAAGCGACGGCACAAGGTAAATTAACTTGTTTATCCCCTTTTGCTATAATCGT TTGTTATTCATCTACAAATTGGTTTTCGGATATAGTACTTAGTTTAAATTATATAGCCCAATTGTGTATGTTATAAAGAT ACCATTGTAAAAGTAAAAGAGATTTCTTAAAAAAAATTGCTGAGAAAGTAAAAGCTACTTTTATTTTTCCTTTTTGAATT TTATTGCTGATTGGTGTGTATTTTGTTGAATCTCATAGGACCAAAAGAAGCTGCAAGATCTACTCCTAAATCAAAAGGAA GCCATGTATGGGTCTAAACCGAGTCCAAGAAAAAGTAACAGCGTTAGAAACACAAATGGGTATCGTGCAAATGGCAATGG GAATGGCAGTGTGTCTTCTATGCCTCCCACACCTCGCCGTAACTCTGTGAGTGGCGGAACATCTGAACTACTAACACCGC GTTCCTACTCTGGCCGTCATAATGGATATTTCAAAGAAATGAGAAGGTTGTCCACTGCACCTCTCAACTATGTGGCTATA TCTAAGGAAGATACCATGTCATATAGTTCTCATTGTGGTTCAGAGCCTGAATCCCCTCCCCAAGTTTAA
CDS sequence (LotjaGi2g1v0024200.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTATTTGAACTCGAGAGGGAATGCTTAGAAGTTTACAGGAGAAAGGTTGATGAGGCTGCCAACACCAAGGCGCGCTA TCACCAGACTGTTGCAGCCAAGGAAGCAGAGCTTGCAACACTAATGGCTGCCCTTGGCGAACATGATATTCATTCGCCGA TTAAAACAGAGAAGAAATCGGCATCCCTGAAGGAGAAGCTTGCATCTGTCACACCACTGGTTGAAGAATTGAAGAAGAAA AAGGATGAAAGGTTGAAGCAATTTGCAGATATTAAAGCTCAAATAGAAAAGATAAGTGGTGAGATTTTTGAAAGCCATCC TGCCAATGATGCTGTGAGCAGCACAACAGTTGCGGAAGAACAGGACTTGTCACTAAGAAGGCTTAATGAATGTCAAACAC ATCTTCGTACTCTTCAAAAGGAAAAGTCCGACCGCCTTCAAAAGGTCTTGCAATGTGTGAATGATGTGCATTCTCTCTGT GGTGTGCTTGGGTTGGATTTTGGCCAAACTGTGGGTGATGTGCATCCAAGCTTGCATGGGACTCAGTTGGAACAATCGAC TAATATTAGCAATAGCACATTGGCAGGTCTAGAACAGACCATTGACAAATTGAAAACAGAAAGGAAAGCTAGAATGCAGA AGCTGAAGGATGTTGTTGCTAAACTATTTGATCTTTGGAATTTGATGGACTCATCAAAAGAAGAGAGAAACTGTTTTCTG AGGATTACTTCTATTGTTAGGATTTCGGAATCAGAACTCACTGAACGAGGTGTTCTTTCGACAGAGATTATAGAGAAGGC TTCAGCAGAAGTAGAAAGGCTTGCCAAACTGAAAGCAAGCAGAATGAAGGAACTTGTATTTAAGAAGAGGTCAGAGCTAG AGGAAATTTGTAGACTGACTCATATTGAACCGGATACCAGTACTGCTCCTGAGAAAGCTAGTGCATTAATAGATTCTGGT CTGGTTGATCCTTCTGAACTTTTAGCTAACATCGAAGCACAGATAATGAAGGCAAGAGATGAAGCTTTGAGCAGAAAAGA AGTAACAGATAGGATTGATAAGTGGCTTTCTGCCTGTGAAGAGGAGAATTGGCTTGATGAATATAGTCAAGATAACAATC GGTACAGTGCTGGACGAGGTGCTCATATTAATCTTAAACGCGCTGAACGAGCTAGAGTAACTGTGACCAAAATTCCAGCT ATGGTTGACAATCTTATAAACAAAACACTTTCCTGGGAAGATGAAAAGAAGACTCATTTTCTATACGATGGGGTACGTTT GGTGTCAATATTGGAGGATTATAAACTGACCAGACATCTCAAAGAAGAAGAAAAGCGACGGCACAAGGACCAAAAGAAGC TGCAAGATCTACTCCTAAATCAAAAGGAAGCCATGTATGGGTCTAAACCGAGTCCAAGAAAAAGTAACAGCGTTAGAAAC ACAAATGGGTATCGTGCAAATGGCAATGGGAATGGCAGTGTGTCTTCTATGCCTCCCACACCTCGCCGTAACTCTGTGAG TGGCGGAACATCTGAACTACTAACACCGCGTTCCTACTCTGGCCGTCATAATGGATATTTCAAAGAAATGAGAAGGTTGT CCACTGCACCTCTCAACTATGTGGCTATATCTAAGGAAGATACCATGTCATATAGTTCTCATTGTGGTTCAGAGCCTGAA TCCCCTCCCCAAGTTTAA
Protein sequence (LotjaGi2g1v0024200.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLFELERECLEVYRRKVDEAANTKARYHQTVAAKEAELATLMAALGEHDIHSPIKTEKKSASLKEKLASVTPLVEELKKK KDERLKQFADIKAQIEKISGEIFESHPANDAVSSTTVAEEQDLSLRRLNECQTHLRTLQKEKSDRLQKVLQCVNDVHSLC GVLGLDFGQTVGDVHPSLHGTQLEQSTNISNSTLAGLEQTIDKLKTERKARMQKLKDVVAKLFDLWNLMDSSKEERNCFL RITSIVRISESELTERGVLSTEIIEKASAEVERLAKLKASRMKELVFKKRSELEEICRLTHIEPDTSTAPEKASALIDSG LVDPSELLANIEAQIMKARDEALSRKEVTDRIDKWLSACEEENWLDEYSQDNNRYSAGRGAHINLKRAERARVTVTKIPA MVDNLINKTLSWEDEKKTHFLYDGVRLVSILEDYKLTRHLKEEEKRRHKDQKKLQDLLLNQKEAMYGSKPSPRKSNSVRN TNGYRANGNGNGSVSSMPPTPRRNSVSGGTSELLTPRSYSGRHNGYFKEMRRLSTAPLNYVAISKEDTMSYSSHCGSEPE SPPQV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 559 | 559 | 9.5E-282 | – | |
| PANTHER | 1 | 559 | 559 | 9.5E-282 | ||
| Pfam | 13 | 512 | 500 | 1.9E-86 | – | |
| Coils | 74 | 94 | 21 | - | – | |
| Coils | 194 | 214 | 21 | - | – | |
| Gene3D | 336 | 468 | 133 | 3.2E-24 | – | |
| Coils | 431 | 460 | 30 | - | – | |
| MobiDBLite | 462 | 523 | 62 | - | – | |
| MobiDBLite | 470 | 518 | 49 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Microtubule cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins. | ||
| Molecular function | Microtubule binding | Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers. |
Expression pattern of LotjaGi2g1v0024200.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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