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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0061300 |
| Transcript ID | LotjaGi2g1v0061300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | MLP; TAIR: AT1G70890.1 MLP-like protein 43; Swiss-Prot: sp|Q9SSK5|MLP43_ARATH MLP-like protein 43; TrEMBL-Plants: tr|I3SXL3|I3SXL3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0061300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:13108301..13109547) extracted from Lotus japonicus Gifu genome v1.2.
ATTATCTATTTAAGCGAGTGCATTCCATCGTTGTAAGTATTCCAAATTCGATCTCCTTTTAATTGCTAAGAAAAAAAATC TCCTGTGTATTGCAGAGAGCAAAGACATGGCTCAGCAGACTCTAAGTGGCAAAGTGGAGACCCAGATACAGATTCAAGCA CCTGCTGCCAGGTTCTACAACATCTTCAGAAAGAAGCTTAATCATCTTCCTAATATGAGCACAGATGTACATGGAGCTAA AGTGCATAAAGGAGACTGGGAAAATGTTGGTTCTGTCAAACACTGGGACTATACTATAGGTATAGTACTAATTAAAGTTA GGCATTAAAGTTAATTGGCAGGTAATTTTCAGGCAATTATTTCAGTGTCATTTTTTTCAAAATTATATATATACCTTATT TCCATTCACATGGTTACATTACAAATACCTTGTTTACAAGTTTATTACAAGCGGTGTATATACACTGCCGAACAATTGAT GGATGCATATGATAGACAAAGCCAAGTTTGATTTTGTTATCTTGGCTTTTGTTATTTAATTAACTTATTATAATATAAAT TACTCTATCGTGAAACCTGCAGAAGGAAAGAAAACATGTGCTAAGGAGAAAATTGAGGCCATTGATGATGATAACATGTT ACTTACATACAGCGTCTTTGATGGTGAAATCAGTGAGGGTTATAAGAGTTTCAAGGTGATATTACAAGTGATTGATACGG AAAATGGTGGGCTTGTGAAATTCACCATCGAATATGAAATGCTCAAGGAGAATATCACAGCTTCATCTCCTGATACTTTT TTGGCCTTCGCTACTAAGGTCACAAAAGATATTGATGCTCATCTTGTTGAGGGTTAATCATCATGACAAATTCATGACGT GGTTGCACAGAACAAATTCAAGCTCAAATAAAAATATTAAAATAAAAGTAAAATAAGACACCAAATCTCATATTGAAATT ACTTCAATATTGGGTTGCATTTTTATTTTGTTGTATATTTATATATGTAATAGACATGTGCGCATCTGAACATGCAAAAC TTAAAATAATGAAGATATTGCTTTCTAAAGCATATATCGTGTTGTAACATTTGCTGTGTGATGGATTTGTAATGAGTAAT ATTTGGTTCAGAGTCATCCGTGTTTATCAGTAATGGAATGTCTGTTAATTTGCTCCTTGTCGTCTTAGGAAAGTCACTAG AGGTGTAAGGGAAAACTACGCTTTCAAGGTGTTTGTTGATATCGGAG
CDS sequence (LotjaGi2g1v0061300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCAGCAGACTCTAAGTGGCAAAGTGGAGACCCAGATACAGATTCAAGCACCTGCTGCCAGGTTCTACAACATCTT CAGAAAGAAGCTTAATCATCTTCCTAATATGAGCACAGATGTACATGGAGCTAAAGTGCATAAAGGAGACTGGGAAAATG TTGGTTCTGTCAAACACTGGGACTATACTATAGAAGGAAAGAAAACATGTGCTAAGGAGAAAATTGAGGCCATTGATGAT GATAACATGTTACTTACATACAGCGTCTTTGATGGTGAAATCAGTGAGGGTTATAAGAGTTTCAAGGTGATATTACAAGT GATTGATACGGAAAATGGTGGGCTTGTGAAATTCACCATCGAATATGAAATGCTCAAGGAGAATATCACAGCTTCATCTC CTGATACTTTTTTGGCCTTCGCTACTAAGGTCACAAAAGATATTGATGCTCATCTTGTTGAGGGTTAA
Protein sequence (LotjaGi2g1v0061300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQQTLSGKVETQIQIQAPAARFYNIFRKKLNHLPNMSTDVHGAKVHKGDWENVGSVKHWDYTIEGKKTCAKEKIEAIDD DNMLLTYSVFDGEISEGYKSFKVILQVIDTENGGLVKFTIEYEMLKENITASSPDTFLAFATKVTKDIDAHLVEG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 4 | 154 | 151 | 7.4E-48 | ||
| PANTHER | 5 | 154 | 150 | 4.5E-67 | – | |
| PANTHER | 5 | 154 | 150 | 4.5E-67 | – | |
| SMART | 5 | 155 | 151 | 3.3E-50 | ||
| Pfam | 6 | 154 | 149 | 9.0E-45 | ||
| CDD | 8 | 154 | 147 | 2.74418E-32 | – | |
| SUPERFAMILY | 8 | 154 | 147 | 8.68E-33 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Defense response | Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. |
Expression pattern of LotjaGi2g1v0061300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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