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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0064000 |
Transcript ID | LotjaGi2g1v0064000.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | MLP-like protein; TAIR: AT4G14060.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein; Swiss-Prot: sp|Q9ZVF3|ML328_ARATH MLP-like protein 328; TrEMBL-Plants: tr|G7I986|G7I986_MEDTR Pathogenesis-related protein bet V I family protein; Found in the gene: LotjaGi2g1v0064000 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:14809263..14812645) extracted from Lotus japonicus Gifu genome v1.2.
GCAGATTTCAAAGTGTTTCTCAACTTGAGCTCGATCGTGTAGAACTTTTTCCTTGTATTGTTGAGCACGAAGTGTGTAAT CATGGCTCAAATTTGTGTCCTTGAGACGGCTGTTCAACTGAAATCGTGTCCTGAAAAGTTATACAACTTGTTCAAGAGCC AAAACCAGCACATTCCAAAGAAAACTCAGAGTGAAAAACTGCATGGCGTTGAGATTCACAAAGGCGACTGGGAGACTCCT GGCTCTGTCAAGATTTGGAAGTTCTGCATAGGTGCGTGAGTTGTTAAATTTAGGGGGTTAATTATATACAGAAAATTTAC ATGATTCATTTCTCGTTTGTCATATATTGATCGAAATCTTATGTTTGGTTTAGTGTCATATTTCGTGTCTCAATAATAAA ATTGTTTTATGCCATTTTATAACCACAAACACATAAGATTATAACTCTCATATAGATGGTGTTTTTTAATTGACATGCAT GACATAACTAGTTAATTTTGTCGTACCTATAATTTTTTTTGTATGTGATATCCGCATTAAGTTACCAAGTAGATTATTGT CATGCGTGCATAATAGGGTTTTGGACTTTTGGTTGTCCAGGCTTATTGACAACTAAGAAAGTGACATATAGAGATGGTAT CTTTTTTTTAAATGATTTAAATTTTTTGCACACTTTTTTGTCCCTAAAGATGTTTTTTGAAATAAGGATAAATGACATCA TAATGATTACATAGTTCATTGTTTACCTAGTTACCAATCTACATAGTGAGTTTCTTCAACTAAAGGGAGTTCATGTAAGC TTTTCCACATCATTTTTACTCCTTCCAATATTTCCTTAATCAGTTTTGTTCATTTCTCTCCCTTTCACCTTCTACCTCTT CGTCCTCCCACAGGTGATTGCCCTTCTCTCCACCACCATTGTTTCTAACGGACCACAATGACTCATCCACTGTTAGCCCA CGCACATAAACTTTCTCGTTTCTCCCTCCACCTCCTCCTCATCTCCTCCCTTTCATCCTCCCCCACTCATCCAAAATTAG AACCTCCATCGCTCTCACCACCAAACCAAAATTATAACCTCCATGGCTCCATCCATTGTACCCCCAACCAAAGCAGAAAT TAGATGGATAGATCGGAGCTTCTCAACAACAGGTGATACAAAAAAATGGAAGATAAATTTTGAATACAAATATAATAATT TTAATAAACTATTTATCTTACTTTAAACATATCTCATTTTAATTAGAATTCGTTTTAAATATTTTACCTAACTTTGGGAG ACCCTGATAGATCGAGTTTATAATTTTCTTAACTGTTACACTTATTTCAGAGGGAAAGGAGGAGGTATTCAAGGAAAGGA TTGAACTGGATGATCTAAACAGAACTATAACTTATGTTGCCGTGGGAGGAAATGTGTTGGAGTTGTATAGAACCTACAAG ACAATCGTGAAGGTTGAGAATGGAATATTGAAACTGAGAATAGAATATGAGAAGCTCCATGAAGACACCCCTCCTCCAAA AAAATATCAGCAATTCGTCAGTAATATTGTTAGAGATATTGATGCAAACCTTGTCAAAGGTTAACCTATGTTGTGGATCA AGTTTCTCATATGATTGTCTAAAAATATAAAGAAATGCTAACAATATGCTATATTTTTTTTCCCTACATACACACGTTTT TATTGGGTAAATTTAATGTATATCCCATAAAAAAATGCACTATTTTGTGGGAGTAATCTAAATTACCCAATAAGAATTTT TGTTGGAAAAAAAATCATGCATGTCAAATAATATATTGTTACCATTCCTATATAGATTATATATGAATAAATGAAACCTT TATAAGATGGTGTGAGTAATGTAATATTCCAAAATGTTTATTTATGAAAATGTAGGTTCCTACGAGTACATATGGTTTTA GTTCTAGAGTTTAATTGGAGGCCACACTTATTGCAACTTGAGGATATGATACTTACATGCTATGTATGATAAGACATATT TAATCTAAGTATCTATTCCCCTATACTTCATCTATTGTCTGTATTATCTACATTATTTTGTGAGTTGTCCCTCGCGCCTT GCTTTGTTTGTGTTTGGGCGGTCGGCAAACTGCCAGACGATCGACAGCTAGTTCGAGATGATTCGTCGCTCGGGGTGGAT CCGAAGCGGAATGACTACTGTTGAGCCTTGCGACGAGGACCCGGACTACACGCGTGATTAGATGAGGGTCGATGATAGTG GTGTAGGGTATGAGTGTTTAGAGTTTACTGATTTTGGGTGTTGTTGTCATAGCTCTGACTAGTCGTGTCTGTACTTTTGG GGAAGGGTAGGTTCCCGATATTTTTCTTTTTGTATGGTTCTCTGTATGGGAATCACAGGGAGTAGTCGGACGTTAAGAGG TATGGAGGAGGACGTTTGGGGCTGACTCTCCCACACTTCAGGATCTTGTATTTATAACTACACTAACTTCAATCCACTTT GGTTACTGAATGCCTTCGGGCTTACTTTATCACTTTGGGGTCTGGTTATATATTATGTTACGTAATGCATCACATGTATT GAATGCTTTGTATTAAGAAAGAAAAGAATAAGAAAAAAAATTACTTGCATTTTCTACATATAGTTTATGATAGGTTACTA TTGTGACACTCGAAAGTCGGGATGTTACAAGAACCGTCCAAGCAATTTGATCATCAGTCAGAAGAGAAGACCACACTTAT GAAAGAGAGGAATATTCAAATTGAAAGCTCTCTGACATTGTTGAAAGAGAAAGTCATGTGCAAAGAATCACGTGATATCT CACAAAGCACATTGGACAAGAAAACAAGTACAATAATGTCACCATCAAAGTTTCCTCTTTCTCTCACTAAAGGACTAGAG CGTTGTTGTTTATGCTACCAACCAACTGACAAGATACACTTTCTCGCATTTGGCTTCAGCAAAGGACACATGCAATGTAT TTAATGCACCTGACAAGAAGACCGTTTGATCCAACGACTAGTACTCAAGATGCTCTACACGCTCCAACGACTCTGAACAT ACCCTGGAAGCTCTTGAAGTATTGAAGGAGAACTTGAAGAATTTCAGAAGTAAGAAACTGAGTTAGAAATTTCATCCATG TCGAAAATCTTTGTTAAGCAAGAAATAAGCAATATTCAAAGAAAATCTTAAGAGTCAAACCTTTCAGATATCGTCTGCTT CAAAGAGAGAAATACCTAAGAGTCAAATCTTTACTTCCAAACTCTCTAGATCAAGAACACAAAGTATTCCTTAGATTCAA ATTCACTCAAAAACTTTGTAGCTCCCGAGTTTTGTAATTTCTACTATCCCTCTTGTGATAAGAGAACCTTGTAGAGCCAA ACGATCTTAAAAAAGATTTAAGG
CDS sequence (LotjaGi2g1v0064000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCAAATTTGTGTCCTTGAGACGGCTGTTCAACTGAAATCGTGTCCTGAAAAGTTATACAACTTGTTCAAGAGCCA AAACCAGCACATTCCAAAGAAAACTCAGAGTGAAAAACTGCATGGCGTTGAGATTCACAAAGGCGACTGGGAGACTCCTG GCTCTGTCAAGATTTGGAAGTTCTGCATAGAGGGAAAGGAGGAGGTATTCAAGGAAAGGATTGAACTGGATGATCTAAAC AGAACTATAACTTATGTTGCCGTGGGAGGAAATGTGTTGGAGTTGTATAGAACCTACAAGACAATCGTGAAGGTTGAGAA TGGAATATTGAAACTGAGAATAGAATATGAGAAGCTCCATGAAGACACCCCTCCTCCAAAAAAATATCAGCAATTCGTCA GTAATATTGTTAGAGATATTGATGCAAACCTTGTCAAAGGTTAA
Protein sequence (LotjaGi2g1v0064000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQICVLETAVQLKSCPEKLYNLFKSQNQHIPKKTQSEKLHGVEIHKGDWETPGSVKIWKFCIEGKEEVFKERIELDDLN RTITYVAVGGNVLELYRTYKTIVKVENGILKLRIEYEKLHEDTPPPKKYQQFVSNIVRDIDANLVKG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 146 | 146 | 2.5E-48 | – | |
Gene3D | 1 | 146 | 146 | 2.8E-39 | ||
SMART | 2 | 147 | 146 | 1.4E-42 | ||
CDD | 6 | 142 | 137 | 3.61707E-26 | – | |
SUPERFAMILY | 6 | 146 | 141 | 8.25E-26 | – | |
Pfam | 7 | 146 | 140 | 2.7E-40 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Defense response | Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. |
Expression pattern of LotjaGi2g1v0064000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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