Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0070300 |
| Transcript ID | LotjaGi2g1v0070300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein tolB; TAIR: AT4G01870.2 tolB protein-like protein; Swiss-Prot: sp|Q3A097|TOLB_PELCD Protein TolB; TrEMBL-Plants: tr|I1KKU9|I1KKU9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0070300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:17176683..17181258) extracted from Lotus japonicus Gifu genome v1.2.
AAATGACCAGATGCATTGGCAATTTTGTTTCCCAAAACTTTTGACCACACATGTTGAAAAAAATATGAATAAGCCTAACA GGTGTATCGGATTTTTATGTTAGCTGGTTGTTTTTTTTTTATTTGAGAGAAGTTAGCTGGTTGTTACGTTTGTTTTTTCT TTTCTTTTATATTTTGAATTTCAAATTTCAAAAAGTATAGGTTTATTAGATGAATATTATGAAGCTTGGCTATATAATAT TTCATGAATTTTAATAGTTTGCCACATGTTCCTATAATTGTGGAAGCTGTAGATTGCTGACACCTAAGCTTTTAATGACT CCCAAACTATATATTATTAGATTAGATTAGATTAGATGTTAAGGTATGGAATTTCTTTGCTTTTTAATATCTATCCAGAT TCCACAATTTCAGATAGCGTTGCTTCGAAGTTCAAATCAAAGACGGCTTCTGTGACTTGTGACACTACCTTGTCTATCAA CCAAGACAAAACACGATCTCAGAGAAGAAAAACATGTCGATAACAACTCTACGTCATGCCATACGCAGAAGCAGAAAACA CCTATTTATACACCCAACCTGCATCATCACATTCCTACCACCAAAGCCTTATCCTCCTTTTCACCCAACACTCTTTCTCA CTCTCAAACTCACTCAACACTTCCAATATTACCAATGTTACCCCCTGGAGGAACCATCGTGTTCAACACTGTTGGTAGAG TACAATACGGTTTCGATGTTTTCACCGTTAACCTTCAAAACCACCCTCCATCAGCAGACCACCGCGTCACCGACGGCGTT TCAATCAACTTCAACGCCCAGTTCCTCGACGATGAGCACTCCCTTGTCTTCGTCTCCGAACGAACCGGGTCGCCCCGTTT CTACCTAACCCGACCCGAAGACAAATCCCCACAGCCCTTACCTCACGTCCCCAACAGCCACTTCCACGATCGCCCAACCA TCAAGAACGGTAACATCTACTTCGCTTCCGCAAATGATCAACCCGACCCGGATCAAAACCCGAACCCGTTTTTCAAGAGC TGGAGCGCGGTGTATTCCGTTGCCGTAGACGGCAGCGGGACCATCAAGAGGCTCACCCCTCGCGACGCAGTGGATTACAG CCCCGCCGTGTCACTCACCGGGAAATTCATCGCCGTCGCTTCCTATGGCTCTCGCCGGTGGCGCACCATGGATTTTCGTG AGCTCGAGACGGAGATCGTTGTGTTCGAGGAATCTGACCCGGAGAATCGCGTTGTTGTCTCCGAGCGCGGTGGGTGGCCA TCTTGGTCGCGAGACTCCACCATTTTCTTCCATAGGATCGCAGAGGATGGTTGGTGGAGCATCTTCCGGGTCGATTTACC CGATTCGAATCTCGCTCAACATCCAACCTCACCGGTTCGGGTCACACCTCCGGGCTTGCACTGCTTCACGCCCGCGGCCA TGCACGACGGGAAAAGAATCGCCGTCGCGACTCGCCGGAGAGGGAACAACGGCATCCGCCACATCGAGATCTTTGATCTC GAGTCACAAACATTCCAGCGAGTCACCGAGTCGATAAACGCTAGCTTTCACCACTACAACCCGTTCGTCTCCCCCGATTC TCACCACCTTGGCTACCACCGATTCAGAGGCGAGTCAACTCAGGGCGAGTCCACGTACCCGCACCTCGACCCGGTGCATT CACCGGTCCCGAATTTGAAGTTGCTGAGACTGAACGGTTCGTTCCCAAGCTTCTCCCCCGACGGCGATTTCATCGCTTTC AACCACGAATTCGATTCCAACGGCGGCGTGAAGATCATCAGATCGAATGGCTCAAAACGCTGGACGTTGCTTAAAGGACG AACATGCTTCTACAACTCGTGGAACCCTACGGAGAAGAACGTGATATACACATCGATTGGTCCAATCTTCGAATCAGCTT CCAAAACAGTTCAGATCGCAAGGATCGAGTTTGATTCGGAGCATTTAACGGATGATCGTGATGAGATTCCGTCGACGGTG AAGATTCTCACCGGAGATAACACCGGGAACAACGCTTTTGCGGCGTGCTCGCCGGATGGGAAGTTTATCGTGTTTCGCTC CGGTAGGTCGGGGCATAAGAACTTGTACATCGCTGACGCGGTTGAGGGAGAGTTTAACGGCGGGTTGCGGCGGTTGACGG AGGGGGAGTGGATTGATACGATGCCGTTTTGGTCGCCGAAGGGTGATTTGATAGCGTTTTCGTCGAATAGGCATGAACCG GGGAATAGTGAGGTGTTTGGGATTTACGTGGTGAGGCCTGATGGGAGTGGTTTGAGGAGGATTGAGGTGGGGAATGATGG AAGGGAGAGGTTGAACCACGTGTGTTTTAGCGGCGACGGCGAGTGGTTGTTGTTCACGGCGAACTTGGGTGGGGTTACGG CGGAGCCGGTGGGGTTGCCGAACCAGTTTCAGCCGTATGGGGACTTGTATGTGGCGAGGTTGGATGGGAGTGGGTTGAGG AGATTGACGTGTAATTCGTATGAAAATGGTACGCCAGTGTGGTACAATGGGGAGTTGATGGTTTGTACTAGTAATGGAGA TGGGGATCAAGACAAGTTGAAGGGTGCGTTTCAAGAACCACTTTGGATCACTTGAGATGTGAGTGAGTGAGAGTTACAAT GGATGAAAATTGAAAACCAATGCTCATACTCAATTGTTGTTACTTGAAATGTCTTCAAATCCCATTCCTTGGATTGAAAC AAATTGAGGTTTGCATTTTGGTTCTAAATCCCTATTTTGGAAGCTCTGGAGTACTTGGCGTATTATAGGAGTAGGAGCTG CCATTTGCATTATGTCATGTGTAACTTAATCAATAAAATACACTCTTACCATATTTCTCTTTTCAAGATTGTCAAAAAAA AACAGATTTCTCTTTTCAAAATGTGGCCCATTGGTCTCCGGTCATGATCAATTGATCATGTTGTCTCAGGTCATGGACTT TGTCTAAGCCATAAGCCCTTAATCTTCCATGCGACCTGCAGGGTCTTGTAATTTAAAAAAGAAAGAAATGAATTAGATAA TCTCTGCTATCTAGATAAATACCTAAGGACTTACATCATGGAATCCCTCAATTCCTATTCCTGCCATCAATTGAGGCTGC TTCATGCTCCGCTTGCGTTGGCAGTTTGGAATCTTGCTCCCATCTTTTGTTCTCTTGCCCATTTGATATGGATGTGTGGC GGGGATACTTCATTTGGCTGGGTTTGCACATTGTTCTCCCATCTGATACGAACAAAAACCAAAAATCAGCTTTTAACCTC AATATGGGTGGCTGAAGCGTGGACTATTTGGCTCCTTAATGTATTTCTCAAAAATCGCACGAACCCAAGGCTTGTCACCA GCATGCAGCAAATTATCAACCAGTGTACTTAGCAAGGCGATATTGTTCAATCTTGCTGATCGTAGCCTTAGTCCTCCCAC TTCCTTAGGTTGAATAATAGTATTTCAAGGTAGCAAACTCCAACCTCTATTGCTTGAACCCTTTGCCCATACACAGCTGC AGACTTCTTTTATCTATAATAAAGTCACATACCGATTGGGGGAGCCATAACGATTGCATTGTGTAGACAGGGATGGCAGT TATCACAGATTTAGCAAGACAAAGCTTACCAGCTCTATTCAACATGCAAGTCTTCCACGACGCAAGTCTTGCATTGATCT TTACCGTAATGGGGATGTTGTTACTTTTGGTTGTCTTGAATTTTGTCCAAAACAACCTGATGTCGAAGCAGATGTTGTGA CATCTGCATTCGTGTAGCACAGGACATCAGTCCATGACTTGGAGTGCTTATGTGTGCCCTGGAAATCTGGTGAAGAGTTT ATTGTGGTTACGTACGCTTTAAGTAGCTATTTTATGGGCTGGTTTTATTGTTGGAATAATCTCTGATTAAGGGATTGATT CCTATTGTGTTTATGATGATTGACTTGTGAACGCAATCAACATTTATGGAAGATTGCGTTCTGATTTGTTGCTGTTGGAC TACTGCTTCAGCTCTTGGAAAAACCTAGTGTGGCTGCTGAAGCTTATATATATTGAAGACCTAAAACGTGAAGACTACTG AAGCTATCGAGTGAAATAGATCAAGTGTTTTAGGGTTGTGTTTTTGTGCTAGTCCTTGTGTTCTTTGTGAACTCACCTTG CTCATTGATTCTATAAGGCAAGGTTGAGTTCTGTGTTCTTGAGTGTTAAAACTCTACTTGTTGTTGTTCTTACCAATCAC TGTGGCAGTGATTGAGAGAAAGTGAGAGAGGCTCTCATACCTAGGTCGATATACTAGGTAGAAATACACTGGGTAGATTA GGAAGAGAACTATGAGCTGTGGGTTCATGAGTGTCTGTAGTTCCTGAATCTTGAGATAGTGAATTTCCTTTCTTTGGGTG CAAACCCTCCAGATATAGGTGAAGTTTCACCGAACTGGGTTAACAACTTTGGTGTTGTGTCTTGTTTATTTTATGCTTTT ACTCTTTACTGTTGTACGATTGTTAAAGTAGTTGACTAAGCATCGCGTATGACATCTGCTATACGGGAACTAGAATTTCA ATTGGCATCAGAGAAG
CDS sequence (LotjaGi2g1v0070300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTACCCCCTGGAGGAACCATCGTGTTCAACACTGTTGGTAGAGTACAATACGGTTTCGATGTTTTCACCGTTAACCT TCAAAACCACCCTCCATCAGCAGACCACCGCGTCACCGACGGCGTTTCAATCAACTTCAACGCCCAGTTCCTCGACGATG AGCACTCCCTTGTCTTCGTCTCCGAACGAACCGGGTCGCCCCGTTTCTACCTAACCCGACCCGAAGACAAATCCCCACAG CCCTTACCTCACGTCCCCAACAGCCACTTCCACGATCGCCCAACCATCAAGAACGGTAACATCTACTTCGCTTCCGCAAA TGATCAACCCGACCCGGATCAAAACCCGAACCCGTTTTTCAAGAGCTGGAGCGCGGTGTATTCCGTTGCCGTAGACGGCA GCGGGACCATCAAGAGGCTCACCCCTCGCGACGCAGTGGATTACAGCCCCGCCGTGTCACTCACCGGGAAATTCATCGCC GTCGCTTCCTATGGCTCTCGCCGGTGGCGCACCATGGATTTTCGTGAGCTCGAGACGGAGATCGTTGTGTTCGAGGAATC TGACCCGGAGAATCGCGTTGTTGTCTCCGAGCGCGGTGGGTGGCCATCTTGGTCGCGAGACTCCACCATTTTCTTCCATA GGATCGCAGAGGATGGTTGGTGGAGCATCTTCCGGGTCGATTTACCCGATTCGAATCTCGCTCAACATCCAACCTCACCG GTTCGGGTCACACCTCCGGGCTTGCACTGCTTCACGCCCGCGGCCATGCACGACGGGAAAAGAATCGCCGTCGCGACTCG CCGGAGAGGGAACAACGGCATCCGCCACATCGAGATCTTTGATCTCGAGTCACAAACATTCCAGCGAGTCACCGAGTCGA TAAACGCTAGCTTTCACCACTACAACCCGTTCGTCTCCCCCGATTCTCACCACCTTGGCTACCACCGATTCAGAGGCGAG TCAACTCAGGGCGAGTCCACGTACCCGCACCTCGACCCGGTGCATTCACCGGTCCCGAATTTGAAGTTGCTGAGACTGAA CGGTTCGTTCCCAAGCTTCTCCCCCGACGGCGATTTCATCGCTTTCAACCACGAATTCGATTCCAACGGCGGCGTGAAGA TCATCAGATCGAATGGCTCAAAACGCTGGACGTTGCTTAAAGGACGAACATGCTTCTACAACTCGTGGAACCCTACGGAG AAGAACGTGATATACACATCGATTGGTCCAATCTTCGAATCAGCTTCCAAAACAGTTCAGATCGCAAGGATCGAGTTTGA TTCGGAGCATTTAACGGATGATCGTGATGAGATTCCGTCGACGGTGAAGATTCTCACCGGAGATAACACCGGGAACAACG CTTTTGCGGCGTGCTCGCCGGATGGGAAGTTTATCGTGTTTCGCTCCGGTAGGTCGGGGCATAAGAACTTGTACATCGCT GACGCGGTTGAGGGAGAGTTTAACGGCGGGTTGCGGCGGTTGACGGAGGGGGAGTGGATTGATACGATGCCGTTTTGGTC GCCGAAGGGTGATTTGATAGCGTTTTCGTCGAATAGGCATGAACCGGGGAATAGTGAGGTGTTTGGGATTTACGTGGTGA GGCCTGATGGGAGTGGTTTGAGGAGGATTGAGGTGGGGAATGATGGAAGGGAGAGGTTGAACCACGTGTGTTTTAGCGGC GACGGCGAGTGGTTGTTGTTCACGGCGAACTTGGGTGGGGTTACGGCGGAGCCGGTGGGGTTGCCGAACCAGTTTCAGCC GTATGGGGACTTGTATGTGGCGAGGTTGGATGGGAGTGGGTTGAGGAGATTGACGTGTAATTCGTATGAAAATGGTACGC CAGTGTGGTACAATGGGGAGTTGATGGTTTGTACTAGTAATGGAGATGGGGATCAAGACAAGTTGAAGGGTGCGTTTCAA GAACCACTTTGGATCACTTGA
Protein sequence (LotjaGi2g1v0070300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLPPGGTIVFNTVGRVQYGFDVFTVNLQNHPPSADHRVTDGVSINFNAQFLDDEHSLVFVSERTGSPRFYLTRPEDKSPQ PLPHVPNSHFHDRPTIKNGNIYFASANDQPDPDQNPNPFFKSWSAVYSVAVDGSGTIKRLTPRDAVDYSPAVSLTGKFIA VASYGSRRWRTMDFRELETEIVVFEESDPENRVVVSERGGWPSWSRDSTIFFHRIAEDGWWSIFRVDLPDSNLAQHPTSP VRVTPPGLHCFTPAAMHDGKRIAVATRRRGNNGIRHIEIFDLESQTFQRVTESINASFHHYNPFVSPDSHHLGYHRFRGE STQGESTYPHLDPVHSPVPNLKLLRLNGSFPSFSPDGDFIAFNHEFDSNGGVKIIRSNGSKRWTLLKGRTCFYNSWNPTE KNVIYTSIGPIFESASKTVQIARIEFDSEHLTDDRDEIPSTVKILTGDNTGNNAFAACSPDGKFIVFRSGRSGHKNLYIA DAVEGEFNGGLRRLTEGEWIDTMPFWSPKGDLIAFSSNRHEPGNSEVFGIYVVRPDGSGLRRIEVGNDGRERLNHVCFSG DGEWLLFTANLGGVTAEPVGLPNQFQPYGDLYVARLDGSGLRRLTCNSYENGTPVWYNGELMVCTSNGDGDQDKLKGAFQ EPLWIT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 123 | 122 | 1.5E-7 | ||
| PANTHER | 4 | 646 | 643 | 0.0 | – | |
| PANTHER | 4 | 646 | 643 | 0.0 | – | |
| SUPERFAMILY | 7 | 168 | 162 | 4.32E-8 | – | |
| MobiDBLite | 71 | 90 | 20 | - | – | |
| Gene3D | 124 | 334 | 211 | 4.3E-17 | ||
| SUPERFAMILY | 139 | 573 | 435 | 6.15E-31 | – | |
| Gene3D | 335 | 524 | 190 | 3.1E-28 | ||
| Pfam | 350 | 362 | 13 | 0.15 | ||
| Pfam | 449 | 479 | 31 | 0.0023 | ||
| Pfam | 491 | 532 | 42 | 5.8E-8 | ||
| Gene3D | 525 | 644 | 120 | 2.7E-11 | ||
| SUPERFAMILY | 551 | 630 | 80 | 1.29E-7 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0070300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…