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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0074500 |
| Transcript ID | LotjaGi2g1v0074500.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | membrane-associated kinase regulator; TAIR: AT1G67050.1 membrane-associated kinase regulator; Swiss-Prot: sp|Q81023|VL2_HPV54 Minor capsid protein L2; TrEMBL-Plants: tr|A0A151S499|A0A151S499_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0074500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:19448569..19450813) extracted from Lotus japonicus Gifu genome v1.2.
TTTTGAATTAGTCTTAAGGTCTCAAACTACACGCAGTAGCTTTATCTCTCTCTCTCTCTGCCACCAACCAAACAACAACC TTTGAATCTTCTCCAAAACCACTCACCATTTTCAACCTTTGCTTTCTCTGAAACCCGGATACAATACCAAAAACTTGTAG TAAACTTTGATTTCATTTCATTTCAAGGTTTCACAATCCAATCCTTTTTTTTACCCATCATTCTCTCACCATATCTGAGA TTTCTTTAAAATATCCTATTTTTCTAGTCAACTTTTGCATCTTTAGGATTCTGGGTTTGAGTGATTTCTCTTTCTTGTTT TTACCAAAAGGTTGAATTGAGTTGAATTGAATGAAATGGTTTTTGAACTATGCTCAGAAAATGGTGGGGTTACCATGAAT CCAAGGGTTTCATTCTCACAGGACTTTTCCCAAACAGATCTCAGACCAGTTGAGGTTGAGGGACACCCTTTGAGATCAAA TTCAGCTGGTTTGAATTTAGGCTTTGATTTTGATTTCTGTGTTCATGAAAGCTCAGAGCTTGAGTCATCTTCAGCAGATG AGCTTTTCTCAGATGGGGTTATGCTTCCCACTGAAATCAAGAAGAAGAACAGCAGCAATGCTCCTAAAAAAGCATTACCT CATCACCATCATCATTCATTACCACCACCACCACCACCACCACCACCATATGCTGTTTGTGAAAATGCCTCAACCAGTAA AATCTCCAAGAAAGTTAGCATCAAGGACTTGAATTATGAAGTGGATGATGGGAAGCATAGCCATAGCTCCAACTCCAAGT CCTTTTGGAGCTTCAAGAGAAGTACTAGTTGTGGCAGTGGATATGGGAGGACCTTATGCCCCTTGCCACCACTTCTAAAC AGAAGCAGTTCAACAGGGTCTTCCACAAATGTTAAGAAGGAAGGTCCTCCTCATGTGAATCAAAATTCACAGAAACAACG CCATTCCACCACCACCACCACAAGGTCTTCTTCTCAAACCTTGTGTCCAAACAATCGTCAAAAGCCTCCATTGAAGAGGA GTCATACTCATACTCATGGGGCTTATGCTAATATCACTCCTGTTTTGAATGTTCCTTCTGCAAACCTTTTTGGCTTGGCT TCAATCTTCTCCAACTACAGAGATAAGAGTAAGAAGAAGTAACTTGCAAAGAAAAAGGTTATACTCTAATATAAAGTTTT ACTAGTTTGCAAATCATATATAGCAAGTTCAAATTAACTTCTTTTTTTTTTCTTCTCAGAATCAATTCTGGCACCCAAAA GCTACTCTCCAGAATTGATTTTAGCTTTAGAATCAATTGTGAAAGAATTCCCAAAGTGGGGTCTGTCTATCTTTTTCTCT ATACTTCCTTCCTGGTTTATCTTGTAAGTTGAAAAGTAAGGTGTAGCCTACTACAGGTTAATTTTCTGCTTTGAAAGGTA ATGGTTTGCATCAAAAAGAAAAAAGTGATAAAAAAGATTTGTGTGAATGGAACTGTCGTGAACAAGAAATGATATAGTAC AGGCATATGATTTGGGGTACCAAATGTCAGGTCAATGTTGCTTTCATGGTTGTCCCATGCTTGTGTTTTTTACCCCTATG CTTTTGTTCTTTGGTCACACTGTGTAAATACATTGATTTTGCTTTCTTTTTTTTTCTTTCTCTTCTGGTTCTCTCCTATT CTGCATGAAAAAACAGATTAAACGGAGAGGGTGATTGTACATTTATTAGTGAGAGGAGGTTGGTGTGTTTGCCTTCTGTT TTTGGGTGTTATCGTCCTTCATGGACTGATTAATGATAATAAACATTGTCTTCTGACTATAATTTTGGAGTTCTTCTATT GTCTAAACATAGAACCCATTATGTATAAATATTAAATAGCATATTAAATCACTGAAATTAACACATGAATGCAATGAATG GGTGTCCTTCTTTGTTGATTTGATTCCTCTCTCTGGTTAGTTCGTACTTCCCAGTGACTTGAAGGTACTATGATTATAGC CAATGGTCCACTCATTAAATTAAATTGAGGTGGAGCCATGAGAGGGAGAGCAGAAGAGGGAGATAATTGAACCAATTAAG GGGGTTTGAAATCCATTGATAAAAAGGTATTTAAATCATATAAGGCTCATTTATGCATACTATACATTGTTTGGTGTATC CAATCTAAAATACAAATGGTAATGAAGGAGTAGAGCCTCCATTAGTGTTAAGAAGATGCCATTGCCACAGTCAAAGGAAG GTCCT
CDS sequence (LotjaGi2g1v0074500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTTTGAACTATGCTCAGAAAATGGTGGGGTTACCATGAATCCAAGGGTTTCATTCTCACAGGACTTTTCCCAAAC AGATCTCAGACCAGTTGAGGTTGAGGGACACCCTTTGAGATCAAATTCAGCTGGTTTGAATTTAGGCTTTGATTTTGATT TCTGTGTTCATGAAAGCTCAGAGCTTGAGTCATCTTCAGCAGATGAGCTTTTCTCAGATGGGGTTATGCTTCCCACTGAA ATCAAGAAGAAGAACAGCAGCAATGCTCCTAAAAAAGCATTACCTCATCACCATCATCATTCATTACCACCACCACCACC ACCACCACCACCATATGCTGTTTGTGAAAATGCCTCAACCAGTAAAATCTCCAAGAAAGTTAGCATCAAGGACTTGAATT ATGAAGTGGATGATGGGAAGCATAGCCATAGCTCCAACTCCAAGTCCTTTTGGAGCTTCAAGAGAAGTACTAGTTGTGGC AGTGGATATGGGAGGACCTTATGCCCCTTGCCACCACTTCTAAACAGAAGCAGTTCAACAGGGTCTTCCACAAATGTTAA GAAGGAAGGTCCTCCTCATGTGAATCAAAATTCACAGAAACAACGCCATTCCACCACCACCACCACAAGGTCTTCTTCTC AAACCTTGTGTCCAAACAATCGTCAAAAGCCTCCATTGAAGAGGAGTCATACTCATACTCATGGGGCTTATGCTAATATC ACTCCTGTTTTGAATGTTCCTTCTGCAAACCTTTTTGGCTTGGCTTCAATCTTCTCCAACTACAGAGATAAGAGTAAGAA GAAGTAA
Protein sequence (LotjaGi2g1v0074500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVFELCSENGGVTMNPRVSFSQDFSQTDLRPVEVEGHPLRSNSAGLNLGFDFDFCVHESSELESSSADELFSDGVMLPTE IKKKNSSNAPKKALPHHHHHSLPPPPPPPPPYAVCENASTSKISKKVSIKDLNYEVDDGKHSHSSNSKSFWSFKRSTSCG SGYGRTLCPLPPLLNRSSSTGSSTNVKKEGPPHVNQNSQKQRHSTTTTTRSSSQTLCPNNRQKPPLKRSHTHTHGAYANI TPVLNVPSANLFGLASIFSNYRDKSKKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 268 | 268 | 3.0E-74 | – | |
| PANTHER | 1 | 268 | 268 | 3.0E-74 | – | |
| MobiDBLite | 85 | 116 | 32 | - | – | |
| MobiDBLite | 100 | 114 | 15 | - | – | |
| MobiDBLite | 170 | 232 | 63 | - | – | |
| MobiDBLite | 172 | 224 | 53 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0074500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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