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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0114900 |
| Transcript ID | LotjaGi2g1v0114900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF810 family protein; TAIR: AT1G04470.1 hypothetical protein (DUF810); Swiss-Prot: sp|Q9YLJ1|POLG_EC05N Genome polyprotein; TrEMBL-Plants: tr|K7MHQ0|K7MHQ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0114900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:42325613..42332105) extracted from Lotus japonicus Gifu genome v1.2.
ATGCAAGGCAACATTGCCATATCCATCATATTCATATTCCTCTTCCTCTTCCTCTTCATTTTGTTTCTTTATTTCTTTTT TCAGTCATCTTCTTTATTTGTATGTGTCTTCCGTTTATAGTAGAAAAACGCAACTTCTTCTTCTTCTTCATTAATTTGAC GCAACAACACACCTTTTGCATGAAGCCCCAGCCACCACATGGGTCTCTACACCCGCCGCCGCCACGACTCCTCTCCCGGC CCCTTCCCTCCGCTCTCACCGCCGACCATCTCCGTCCCCTCCCCACTCCTCCCCCACCACCTCCGCCATGACTCCTCTCC TTTCCCCTTCCCCAACACCTCACCACAACCACCACCACCACCACATTCCCACGATTTCCCCCGCCACAACCGCCGCGAAT CCCTACCCGGCGCTGCCCCTTCTTTCCCTCCCACCTCCCCGCCGTCCTCATCTCTCCATTCCCGGCGCGATTCCTACCCC GGCCCCTTCCCTTCGCTCCCCTCACCGCCCTCCTCAACCGCCGACCCTCCTCCTCTCCTCTTCCACGCCCGCCGTGAATC CTGCCCCGGCCCCTTCCCCTCGCCGCGCCGCCACGAATCCGACCCGACCCTCCTCCCTTCCACCTCATCACCCTTTCTCA ACCACCCCCGCCACCGTTTCAAACGCCGGCTCGACCTCGACCTCGCGTGGCCCTTCGGCGAGCTTGAAGGCGTTGACGAT GATGACAAGAGGGAAACCGCCTACGAAATCTTCTTCACGGCGTGCCGGTCCTGCCCCGGATTCGGTGGCCGGAGCGCGCT TACGTTTCATTCCAAGCACGAGAATGACCACGGCGGCGGAACGCAGACGAGCAGGGTGAAGCAAGCCCTCGGGTTGAAGA TGTTGAGAAGCTCCATGTATCAGAGAATGGTTTCCTTCGGGAGAGGCAGTGGCTGGTCGTCCATGCCGTCATCGCCGGTG GCTGACGGAAGCCCGCGGTCCCGGGTCGCGCCGCGGAGGACGATGACTATGGCGGAGGTCATGAGGCTGCAGATGGGGGT GTCGGAGCAGAGTGATAGCCGGCTGAGGAAAACCCTCATGAGGACCCTTGTTGGCCAAGTAAGTTAAGATAGATAGATAG ATAGATAGATAGATTGATAGATAGATAATAATTAAATTCAATTTTTAATAATTGTTGTAAAAGCTTAGCATGCATAATAT TAATAATAAAATGACATCAAATTTTATGTTGAGGTTCTTTCACATTGTATTAGAACTTTGGTTAATTTGTGCTCTGATAT AATAATTATTGGAACCAGTGTGCTTAAAAATGTATGTTTGATGTATAGTTTACACTTCATTAAAGTTTTTTCTGTCTCTT TTGGGTGAAGTCTTCAAAGTTGTTTCAGGACTTTTTTGGCTTTTAGTTCTTGCAGAGTGGTCTTTGGCATATTCGTCAAT TCCTAGTGCGATGACAAAAACTTGGGTTGAAATCGGAGTGAATTTCATCTCATAATTTCAGATTTTCAGTTAGTTGAATG GATTTTTTACTAATATTTAAATTTTCCTGCTGTGCCAATGAAAAGGACCTCATTCTAATTTGATACTTACAATGTGAATG AAACTGTTGAATAACATGTTGTCTCAATCCACAAGAGTACCATTGGCTCAATGTGGAGCAAATCACATTGTTCCTGAGAA AAAATCCGGTTCTGGAAACAAAGCACCTTGCCTCTTGTGTTTATGATTTTGCAGATTCTTACAACTGATATCTTTGTGAT TTAATTAAGTATTTACTTATGTGCTGCAGATTCTTACAACTTATTTCTTGGTGTATAAATGGAAATTGGAGTAATTAGTG TGGATATAGCTAAAATAGATTAGGCATAGAATGAATCTATAAACACATATAATCTTTTAGTTGCATAATCTTTTGGATCT AATTATCTCAAACCATCTGAATTGCAGCTTGGCCGGCAAGCAGAAACGATAATCCTCCCCTTGGAACTCCTTCGCCACCT AAAACCTTCAGAATTCAGCAATCCCCATGAGTACCATTTATGGCAAAAGAGGCAGCTTAAGATCCTTGAAGCCGGGCTCC TGTTGCACCCTTCAATTCCTGTAGAGAAAAACAACACATTTGCCATGAACCTCAGGGACATTATTAACAGTGCTGAACTT CAACCTCTAGACACTAGCAAAACCTCAGAAACCATGAGAACCTTCAGCAACGCCGTGGTTTCGTTGTCGATGAGAAGCCC TAATGGCATTCCCACTAACGTTTGCCATTGGGCTAATGGATACCCTGTCAATATTCACCTCTACATTTCTCTTCTTCAAT CGATTTTCGATCTCGCTGACGAGACACTGGTCCTTGATGAGGTAGATGAGCTTCTTGAGCTGATGAAGAAAACGTGGTCA ACATTGGGGATCAATAGGCAGATTCACAATGTGTGCTTCACATGGGTGCTGTTTCAGCAGTATGTGACAACTGAGCAGAT AGAACCTGATCTTCTTTGTGCCTCACATGCTATGTTGAATGAGGTGGCAAATGATGCTAAGAAAGAAAGGGACTCTTTGT ATGTTAAGATATTGACATGTGTGCTCAGTTCAATGCAGGGGTGGGGAGATAAGAGATTGCTTAACTACCATGAATATTTC CAGGGAGGGGCTATTGGACAAATTGAGAACCTTCTTCCTTTGGCCTTGTTAGCATCCAAGATTTTAAGAGATGTTGCGAA CTCTGATGGGGAAGAGCAACATAAAGGAGATAAAACTCCAGTGGATTTCTCTCGAGATCTGGTTGATGATTATATTCGCT CTTCCTTGAAAAATGCATTTGAAAAGGTAGGTAACATTCAGGAACCATTCCTCCAGGTTGATCTGTTAAAAGAATGCATA TAATTAACTTTTATTGGAAGAAAAGTAAGTTAAAACATTTACATTAGTCCCTGAATAATGAAAATCAGCTAAAGGTCCTC AACTAACATTTTGTCTGACCCAATGGGTGCTGGTCACAGTGGGTAAGAGTGGCTGTTTGAACCCTTTGGTTGAAAGTTCG ATCCTTTGAAGCCGCACTTTATCTTCGAACTTCATCATACCTGGGTCAGAATTGCTAAAGCAATTTAGTACAACAACATT TTGTCTGTCAAATTAATCCTTAAATTTGTATTAGATCTATTAAATTAGTTCTTAAAGTATTTGATTTGAGGACTAATTTA ACAGTTCAAATATACATTCTGGGATTTCGAATTCAGATATTGATAAGATCAGGGGAAAACCTATAGTCAATGTATATGTT AGAAGGTCAGCTGAGGGAAGGGATGTTAAGTGAATTAGTCATTTGGGCTACTTTTGTAATAACTCCAGTCTGTAGGGACT GGAAGTGAATTAGGAAATAATTGTAATACAGCTTATAAATAGCTGTCAGTTAGAGTTTGTTCGGAGTTTTGTGGTTAGTT GAGTTGGTTGGAACTGAATTGTGGAATTCAGTTATCTCGCTCTCTCTAGAAACCTGTAACTGTTCTGTTCTTCTGAATAA GATTCTTCTCCATTTCTGGAGATTTCTCTTCCTGTTCTTGAATCTCTTGCATTCAGATTACCAGTTCTAACAGATATTAC CAAGACCGACAGTATATCTTTCAGGAATTAATTTAATTATTTATTGAATTTATATACTTAGCATTGCTTAACATAATGAA CCTTCTGCATTGTCATAAAACAATAACACAATGTCTTTTTTTTCTGATGCCTGTAGATAGGGGAAGCAGCAAATGTCAAA TCTGCTGAATCTGAAACAGAGAAAGAAATAAGTGAACTTATGCTTCAATTAGCCCAGGAGACTGAAGATTTGGCAATGAA GGAGAGAAAATATTACAGTCCAATATTAAAGAAATGGCACACAATAGCAGCAGCAGTTGGGGCGTTGACGCTGAATAATT GCTATGGACATGTGCTAAAGCAGTATTTAAGTGAAGTGATGACCTCAATAACAGTTGAGATAGTTCTAGTACTGCATAGG GCTAAAAAGCTAGAAGATGTTTTAGTTCAAATGGTAGTTGAAGAAACTGCTGATTGTGAGGATGGTGGCAAAACAATAGT GAGAGAGATGGTTCCCTTTGAAGTTGATTCAACCATAATGGACCTTACAAGAAAATGGATAGAGGAGTCACTGCATGAAG AGAAAGAGTGTCTGCAAAGAGCAAAAGAAACTGAAGTAAGTTTTAGCATTATTATGATCCTCTTTCCTATGACGATATCC AGAAGGAGGACACTGTATATGTTATGCATTTAGAAAATTATATCACATGAATTTTGTTTTTGAAAATGGTATATGAATGT TCTTTCTCTTCAATTTCAGTCATGGAATCCAAAGTCTAAATCAGAGCCGTATGCAAAATCAGTGGTAGAGCTGATGAATT TGGCCAAGAAAATTGTGTACGAATTCTTCCAAATCCCAATATCAATAACTGAGGATTTAGTTGAAGAACTTGCAGATGGA TTAACAAAAATCATCCGAGAGTACATGATGTTTGTTGCAGCATGTGGTGAGTACTCACAATCTATATAAGCTAAACATGT TTTCTCTAGAAAGCTTCAAACAGTTGTTTGGATGTTGAAAATTGAAATCAAAATAAGAAAAGTGTCTAGAAACTATAGCT CAAGTTGCACTTGGTTAATTTGGGAATCGGTTCCTAATTTAATTCAGGATATTCTGTTTGTGCTTTAGCTTATTTTCCTC CCATATCCTAACCAATCTACCTCTATTATAGCAAAACAACAAATGCAGATAACTAAATTGCTACCTGCTAGTACTTGCTA GTTACCATGGTTTTGACTTTTGAATTATGGTTATAGTTGCACATACAGTTCTATTACATTTATTTAAACTGTAGAAAATT GCAAGAAAATGCTATAGATATGACCTCAATTACTACCATGATGTACAAAGACTTCCAACTATGCTACTAGGCAAAACAAT TTAGAAACAGCATATTGTGTAGCATTCTGATTAACTATCTTTTGGTATAATTTCTCTCAGGTTTGAAAGAGAACTACATT CCCTCACTTCCCCCACTGACCAGGTGCAACAGGAACTCAAAGTTCCACAAGCTGTGGAAGATAGCTAGGCCCTGCAACGT TAGTTGTGAAGATCCACACATATATGGAATATTAGAAGCTAATCACCCCCATTCATGCACGAGCCGCGGAACACAGCGCC TGTACATTCGCCTCAACACCTTATACTACCTCCTTTCTCAAATCCCCTCTCTTGACAAATCACTCTCCCTGACCCCACGA GTGGTTCCTTCAGACCGCCACAAGACTCGAAGCACTTCATACTTTGAATCAGCAAGCAGCTCCGTCCTTGCAGCCTGCCA GCACGTCTCTGAAGTCGCTTCCTACCGCCTCATATTCCTCGACTCAAACTCCTTCTTCTATGACAGCCTCTATGTTGGCG ATGTAGCGAATGCCCGGATAAACCATGTCCATGCCTTGACAACCCTCAAGCACAATATCAAACTAATGACTGCAATTCTG ACAGAGAGAGCTCAAGGACCTGCAGTGAAGGAAGTCATGAAGGCCTCTTTTGATGCATTTCTCATGGTTTTGCTTGCGGG GGGAACGTCAAGGGCGTTTAATGAGTCCGATCATCAGAGTATCCTAGAGGACTTTGAAGGTCTGAAGCAGGAATTCCGCA CTTGTGGAGAAGGATTTGTGGCAGAAAATGTGGTGGAGAAAGAGGCTGAGAAAGTGGAGGGAGTCATTGCATTGATGGGG ATGAGCACTGAAGACTTGATGGAGAATTTGAGTAGCTTGTCAAGTGAATCAAGTGGAATAGGAATTGTTGGGAATGGGCA GAAGTTGCCAATGCCTCCTACTACTGGGAAGTGGAAGACAACAGACCCCAACACAATATTGAGGGTATTGTGCTATAGAA ATGATAGAGTTGCAAATCATTTTTTGAAGAGGACATTCCAGATAGCTAAAAGGAGATGACAACAAAAGAGGCTGATAGTG GGCCTAAAGAATGGGTTTTGATATATTCACACATATTCATCTTCTGTCCCATTTCCGCCCATTTTCTCTTCTTACTCTTA CTCTATTCCTATATGTCTCTGGGTGCGGATGAAATTGGGATGTGAACAAATTATTTTTGTAAAGTTATAGGGTATAAATT AGGAAGAATAGGAAAGGAAGGGGGATCATTCCCCAGACCATTGTATGTAAATGTGTAACAACGTGAATCTGTTAGTTACT TATTGTGTTAAATAGGGAGAGAAGGGGCAGGGAAGGGAGTAGGAAAACAATGGAAAGGAGTTAGTGGAACTGTCTGTGTC TCATATACTACCTCTGAATCTCATTGATAAGGGGGATTTTGTTGTATTTCTCCTCCTGTTATGGTTAGGTTCTACCATAG GCATATTAATTTTTGTTTGTGGTTGAAGTTAAAGAATCCAATTTGTAACAAGTTGTGGCAATATATTTTTTTTCTTTTTC CTCCTAATGGACG
CDS sequence (LotjaGi2g1v0114900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTCAATTAGCCCAGGAGACTGAAGATTTGGCAATGAAGGAGAGAAAATATTACAGTCCAATATTAAAGAAATGGCA CACAATAGCAGCAGCAGTTGGGGCGTTGACGCTGAATAATTGCTATGGACATGTGCTAAAGCAGTATTTAAGTGAAGTGA TGACCTCAATAACAGTTGAGATAGTTCTAGTACTGCATAGGGCTAAAAAGCTAGAAGATGTTTTAGTTCAAATGGTAGTT GAAGAAACTGCTGATTGTGAGGATGGTGGCAAAACAATAGTGAGAGAGATGGTTCCCTTTGAAGTTGATTCAACCATAAT GGACCTTACAAGAAAATGGATAGAGGAGTCACTGCATGAAGAGAAAGAGTGTCTGCAAAGAGCAAAAGAAACTGAATCAT GGAATCCAAAGTCTAAATCAGAGCCGTATGCAAAATCAGTGGTAGAGCTGATGAATTTGGCCAAGAAAATTGTGTACGAA TTCTTCCAAATCCCAATATCAATAACTGAGGATTTAGTTGAAGAACTTGCAGATGGATTAACAAAAATCATCCGAGAGTA CATGATGTTTGTTGCAGCATGTGGTTTGAAAGAGAACTACATTCCCTCACTTCCCCCACTGACCAGGTGCAACAGGAACT CAAAGTTCCACAAGCTGTGGAAGATAGCTAGGCCCTGCAACGTTAGTTGTGAAGATCCACACATATATGGAATATTAGAA GCTAATCACCCCCATTCATGCACGAGCCGCGGAACACAGCGCCTGTACATTCGCCTCAACACCTTATACTACCTCCTTTC TCAAATCCCCTCTCTTGACAAATCACTCTCCCTGACCCCACGAGTGGTTCCTTCAGACCGCCACAAGACTCGAAGCACTT CATACTTTGAATCAGCAAGCAGCTCCGTCCTTGCAGCCTGCCAGCACGTCTCTGAAGTCGCTTCCTACCGCCTCATATTC CTCGACTCAAACTCCTTCTTCTATGACAGCCTCTATGTTGGCGATGTAGCGAATGCCCGGATAAACCATGTCCATGCCTT GACAACCCTCAAGCACAATATCAAACTAATGACTGCAATTCTGACAGAGAGAGCTCAAGGACCTGCAGTGAAGGAAGTCA TGAAGGCCTCTTTTGATGCATTTCTCATGGTTTTGCTTGCGGGGGGAACGTCAAGGGCGTTTAATGAGTCCGATCATCAG AGTATCCTAGAGGACTTTGAAGGTCTGAAGCAGGAATTCCGCACTTGTGGAGAAGGATTTGTGGCAGAAAATGTGGTGGA GAAAGAGGCTGAGAAAGTGGAGGGAGTCATTGCATTGATGGGGATGAGCACTGAAGACTTGATGGAGAATTTGAGTAGCT TGTCAAGTGAATCAAGTGGAATAGGAATTGTTGGGAATGGGCAGAAGTTGCCAATGCCTCCTACTACTGGGAAGTGGAAG ACAACAGACCCCAACACAATATTGAGGGTATTGTGCTATAGAAATGATAGAGTTGCAAATCATTTTTTGAAGAGGACATT CCAGATAGCTAAAAGGAGATGA
Protein sequence (LotjaGi2g1v0114900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLQLAQETEDLAMKERKYYSPILKKWHTIAAAVGALTLNNCYGHVLKQYLSEVMTSITVEIVLVLHRAKKLEDVLVQMVV EETADCEDGGKTIVREMVPFEVDSTIMDLTRKWIEESLHEEKECLQRAKETESWNPKSKSEPYAKSVVELMNLAKKIVYE FFQIPISITEDLVEELADGLTKIIREYMMFVAACGLKENYIPSLPPLTRCNRNSKFHKLWKIARPCNVSCEDPHIYGILE ANHPHSCTSRGTQRLYIRLNTLYYLLSQIPSLDKSLSLTPRVVPSDRHKTRSTSYFESASSSVLAACQHVSEVASYRLIF LDSNSFFYDSLYVGDVANARINHVHALTTLKHNIKLMTAILTERAQGPAVKEVMKASFDAFLMVLLAGGTSRAFNESDHQ SILEDFEGLKQEFRTCGEGFVAENVVEKEAEKVEGVIALMGMSTEDLMENLSSLSSESSGIGIVGNGQKLPMPPTTGKWK TTDPNTILRVLCYRNDRVANHFLKRTFQIAKRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 274 | 274 | 4.5E-101 | – | |
| PANTHER | 1 | 513 | 513 | 0.0 | – | |
| PANTHER | 1 | 513 | 513 | 0.0 | ||
| ProSiteProfiles | 62 | 204 | 143 | 20.17 | ||
| ProSiteProfiles | 340 | 451 | 112 | 17.15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0114900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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