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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0118800 |
| Transcript ID | LotjaGi2g1v0118800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT1G27180.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|F4J339|RPP1_ARATH Probable disease resistance protein RPP1; TrEMBL-Plants: tr|D6PT04|D6PT04_SOYBN Rj2 protein; Found in the gene: LotjaGi2g1v0118800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:43511692..43515817) extracted from Lotus japonicus Gifu genome v1.2.
TTATCATTCCAAGCTTTCTTTCTCATGGCTCTGCTACCATCATCATCATCATCATCCTCCTTCACCTATGCATTCTGTTA CGATGTATTCCTCAGCTTCAGGGGCTCTGATACTCGCTTTGGTTTTACTGGCAATCTCTACAAAACTCTCTCAGACAAGG GAATCCACACCTTCATTGATGATGAGGACCTTAAGAGAGGAGATGAAATCACACCCGCACTTATCAAGGCCATTCAAGAG TCAAGGATCGCCATCCCTATCTTCTCTGTGAACTATGCTTCTTCTTCATTTTGCCTGGATGAACTTGTCACCATCATGGA GTGTTTCAAGGAAAAAGGTCGGTTGGTTTTTCCGGTTTTCTATGATGTGGATCCTTCTCATGTCAGACATCAAAGTGGGA CTTATGCTGAAGCACTGTACAAGCATGAGAAGAGGTTTAAGGATAGAAAGGAAAAGTTGAAGGACAACATGGAGAGGTTG CAAAAATGGAAGATGGCTCTTAACAAAGCCGCTAATTTGTCAGGCTCCCATTACAAACCCAGGCACCCCACTTCACCCTC TTTTTCCCTTCTTATATTGTGTTTCTTTACTATTTCACGAACATGATGAATTCATTAATTGTTATTACTTAACACAAAAT GCACTTCTCTTATTGGGCAGAGATGGATCTTATGAACACGAGTTTATCGGAAACATTGTTAAAGAAGTTTCAAGAAAGAT TAATCGTGTAGCTTTACCTGTTGCTGATTACCCAGTTGGGCTAGAGTCCCAAGTGCGACAAGTGGTATTGCTTTTGGATC TTGAGTCTGACGATAGAGTTCACATGGTAGGAATTCATGGAATAGGAGGGATTGGTAAAACAACACTTTCTCTAGCAGTT TACAATTCCATTGCTGACCATTTTGAAGGTTTATGTTTTTTAGAAAATGTTCGAGAAAATTCAAACAAACATGGGTTATT ACATCTTCAAAAGACCCTCCTTTTGGCTGTACTTGGAGAGAAGGAAATTGAGATAACAAGTATTAAGCATGGAAGTTCAA TAATACAACGGAGGTTCCAAAAAAAAAAGGTTCTTATCATTCTAGATGTTGACAAGAAAGAGCAGTTGGAGCATCTCGCC GGAAGCCCTACTTGGTTTGGTCTTGGTAGTAGAGTCATCATTACTACTCGGGATAAACACTTGCTAGCATGTCATGGAGT TAAAAGAACATATGAAGTGGAAGAGTTGAAGGAGGAAGATGCTTTTGACTTGCTCAGGTTTAAAGCTTTTAAAAAGGACA AAGTTAGCCCAAGTTATATGGACATATTAAACCGTGTAGTGGAATATGCTTCCGGTCTTCCATTGGCTTTGGAAGTAATT GGTTCTAACTTGTATGGAAAAAGCATAGAAGAATGGAAATCTGCATTACAACAATATGAAAGGATTCCAGATAAAAATAT TCAAAAAATACTTGAAGTGAGCTTTGATGCTTTGAAGGAAGAAGAGCAGAGTGTTTTCTTAGACATTGCTTGTTGCTTCA ATGGACAAGGATTTCAAGAGGTAAAAAATACACTCAATGCTCATTATGACCAAAGCATAATATATCAAATTGGAGTGTTG GTTGATAAATCTCTCGTAAAGATTACTAAAGGGGGTGAAGTGACACTACACGACTTGATTGAGGATATGGGTAAAGAAAT TGTGCGGCGGGAATCACCAAAAGAGCCTGGAAACCGCAGTAGGCTATGGTCTCTTGAAGATATATTTGAAGTTTTGGAAG AAAATACGGTAAGACTAGTCTGAATGATTTTGTTGTTTCTCTTCGATCTTGATTTAGTCTTTTTTATTATTCAAAGCTAC TAATGTTATATTACCATTTTCCCCGATTTTATAATAGGTAATTGTTAAACGCATCCCCTGACATCTAATCCCACCCCCAC CTTTAAGTGTGTTAGTTCACGCACTTATAAGTGCGTGGAAAAAAAAGGGGTGGAATTAGATGTTAATGGAGTGCGTTTAA CAATTACCTTTATAATATTTGCATGTCTCTAAGTACTTGTGTTAATGTCCTATTTGTTTAATTGATTTGTCTTTATTTCT TTTTGAAGGGAACAAACAAAATTGAAATGATAAATCTTGATTACCCGTCATTTGAAGAAGTGGATTGGGATGGAGATGCT TTCAAGATGATGAAAAAACTCAAAACACTTATTATTAGAAAAAGTCATTTTTCTATAGGTCCCAAGTATCTTCCAAATAG TTTAAGAGTACTAGAGTGGTGGAAATATCCTTTAGCATATTTACCAGGTGACTTTCATCCAAAGAAACTTTCCATTTGCA AATTACCTGAGAGTAGGTTTATGTCATTGGAGTTGTTAAGTTCATCAAAGGCAAGTATGATAATGAACCCTTGATCGTCT AGTGTATGATACATCACTAATATTCATTTGATTCTTGTTTTTCTTTCTTTCTTTTCATGTTAACAGAAGTTCGTGACTAT GAAAGTTTTAAATCTCAAAAGGTGTGGATTATTAACACAGATACCTAACCTATCTGGTCTCCCAAATTTAGAAGAGCTTT CATTTGCACGTTGTTCAAAAGTAATTACAATTGACTATTCGGTTGGGTTGTTGGACAAACTTAAAATCTTGAATGCTGAT GATTGCTCTCAGCTTAAGAGTTTTCCTCCCCTTAAGTTGCCCTCTCTTGGAGAACTCATGCTTAGAGGTTGTTCAAGTCT TGAGAGTTTTCCAGAAATATTAGAAGAGATGAAAAATATAAAAGACCTTGATTTGGTTGGCACTTACATAAGCAAGTTCC CACATTCATTTGGAAATCTTACTCAACTTCGAGAAATGACAGTTTCTCACTTGCTGCCATCAAGGAGCTTAGTCACGATG CCGCAACTAGCAAAGCTCAAAATCAGTCAGCAGCGGATATGGGAAGAGGAGGACGAGAGAGAGAGTGAAGAACAAGTGAT GGATGGTGGAGCTATGGCATTAGTTCCCACGTTGAATGAAAAAGAGAGTTCCATTTTGCCTTCAAAAGTAGAAAGGCTTA CTGTCGATTGGAGCCACCTGTCAGATGAATATTTAGTATTAATTCCCTCATTGTTGCCTCACTTAAAATATTTACGCCTA GAGGATTGTCCAATCACAGTTGTACCTGAATGCATCAAAGAATGTCGCTTTTTACGAGAGCTTTCCTTGGCTTATTGCAA GCAACTAAGAGAAATTTGTGAAGGAATTTTGCCAAGATTAACCAACTTAGATGTATTCGGATGTCCATCCTTGAGTTCCA GTTGTAGAAGCATGTTGCTGAGGCAGGTTAGTTACGTTTTTGATTTGATTTAATTTGTTATGTTTAGAATGTATTTATTG ATTTCATCATTATTAATTAATGTTCTACGCTTAAACAGGAACTGCATGAAGATGTACAAATTAATCTTGAATTGCAAACC TTAGAAGGAGAAACGATTCCAGAGTGGTTTGAGCACCAGAACAGGGGTCGATCTCCGCCACTTTCTTTCTGGTTTCGTAA CAACATCCCTCGCATCATACTATATACAGCTTTTCCACCTTCTCCTACTTTTAAACAGTCGGATTTTAGTGTATTCATCA ATGGCTATTCAAGATACACCGGTTTCCTACCAGTGGCACCATATTCGGGTCTTACCATTCTTCGTAGGCTAAGCCAAACA AACTATTTATTGAAAGATAAATTTATAAAAAATGGGTGGAACCATGTGGAGTTTAGGACTGCCAGTGGCTTAGATTGTGG AATTGGAATCCATGTGTTGAAAGAGCAAAACATGCTGGATATCCGATTCACGAATCCTTTAGACTTGAACTTGGTACCAC CTGAAGAGGATGATGTGATATATGATTTGATTGAAAGAGAATACGAGCATGAGCATGAGAATATTCGATTCACCAATCCT GATTGTGAGGAATATTTTGACTGTGAATCATCGTTTTCAAGCACTGCTTCTGATGTGGAGGAAAATGAAGATGTGTCTTC CAGTTAGGAGGTTCCATTCGACCCTGTATATCAATCATTTTTGTGCAACCCTATTTTGTAAATAACAATTCTTGGACACT ACATTTAATTACTTTCCTCCACTTTCTAGTATCTGTTAAATCTGTA
CDS sequence (LotjaGi2g1v0118800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAGTTTTAAATCTCAAAAGGTGTGGATTATTAACACAGATACCTAACCTATCTGGTCTCCCAAATTTAGAAGAGCT TTCATTTGCACGTTGTTCAAAAGTAATTACAATTGACTATTCGGTTGGGTTGTTGGACAAACTTAAAATCTTGAATGCTG ATGATTGCTCTCAGCTTAAGAGTTTTCCTCCCCTTAAGTTGCCCTCTCTTGGAGAACTCATGCTTAGAGGTTGTTCAAGT CTTGAGAGTTTTCCAGAAATATTAGAAGAGATGAAAAATATAAAAGACCTTGATTTGGTTGGCACTTACATAAGCAAGTT CCCACATTCATTTGGAAATCTTACTCAACTTCGAGAAATGACAGTTTCTCACTTGCTGCCATCAAGGAGCTTAGTCACGA TGCCGCAACTAGCAAAGCTCAAAATCAGTCAGCAGCGGATATGGGAAGAGGAGGACGAGAGAGAGAGTGAAGAACAAGTG ATGGATGGTGGAGCTATGGCATTAGTTCCCACGTTGAATGAAAAAGAGAGTTCCATTTTGCCTTCAAAAGTAGAAAGGCT TACTGTCGATTGGAGCCACCTGTCAGATGAATATTTAGTATTAATTCCCTCATTGTTGCCTCACTTAAAATATTTACGCC TAGAGGATTGTCCAATCACAGTTGTACCTGAATGCATCAAAGAATGTCGCTTTTTACGAGAGCTTTCCTTGGCTTATTGC AAGCAACTAAGAGAAATTTGTGAAGGAATTTTGCCAAGATTAACCAACTTAGATGTATTCGGATGTCCATCCTTGAGTTC CAGTTGTAGAAGCATGTTGCTGAGGCAGGAACTGCATGAAGATGTACAAATTAATCTTGAATTGCAAACCTTAGAAGGAG AAACGATTCCAGAGTGGTTTGAGCACCAGAACAGGGGTCGATCTCCGCCACTTTCTTTCTGGTTTCGTAACAACATCCCT CGCATCATACTATATACAGCTTTTCCACCTTCTCCTACTTTTAAACAGTCGGATTTTAGTGTATTCATCAATGGCTATTC AAGATACACCGGTTTCCTACCAGTGGCACCATATTCGGGTCTTACCATTCTTCGTAGGCTAAGCCAAACAAACTATTTAT TGAAAGATAAATTTATAAAAAATGGGTGGAACCATGTGGAGTTTAGGACTGCCAGTGGCTTAGATTGTGGAATTGGAATC CATGTGTTGAAAGAGCAAAACATGCTGGATATCCGATTCACGAATCCTTTAGACTTGAACTTGGTACCACCTGAAGAGGA TGATGTGATATATGATTTGATTGAAAGAGAATACGAGCATGAGCATGAGAATATTCGATTCACCAATCCTGATTGTGAGG AATATTTTGACTGTGAATCATCGTTTTCAAGCACTGCTTCTGATGTGGAGGAAAATGAAGATGTGTCTTCCAGTTAG
Protein sequence (LotjaGi2g1v0118800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKVLNLKRCGLLTQIPNLSGLPNLEELSFARCSKVITIDYSVGLLDKLKILNADDCSQLKSFPPLKLPSLGELMLRGCSS LESFPEILEEMKNIKDLDLVGTYISKFPHSFGNLTQLREMTVSHLLPSRSLVTMPQLAKLKISQQRIWEEEDERESEEQV MDGGAMALVPTLNEKESSILPSKVERLTVDWSHLSDEYLVLIPSLLPHLKYLRLEDCPITVVPECIKECRFLRELSLAYC KQLREICEGILPRLTNLDVFGCPSLSSSCRSMLLRQELHEDVQINLELQTLEGETIPEWFEHQNRGRSPPLSFWFRNNIP RIILYTAFPPSPTFKQSDFSVFINGYSRYTGFLPVAPYSGLTILRRLSQTNYLLKDKFIKNGWNHVEFRTASGLDCGIGI HVLKEQNMLDIRFTNPLDLNLVPPEEDDVIYDLIEREYEHEHENIRFTNPDCEEYFDCESSFSSTASDVEENEDVSSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 402 | 402 | 9.2E-65 | – | |
| PANTHER | 1 | 402 | 402 | 9.2E-65 | – | |
| Gene3D | 1 | 83 | 83 | 1.2E-9 | ||
| SUPERFAMILY | 3 | 271 | 269 | 6.51E-31 | – | |
| Gene3D | 84 | 301 | 218 | 1.6E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0118800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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