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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0143900 |
| Transcript ID | LotjaGi2g1v0143900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Low-temperature-induced 65 kDa protein; TAIR: AT5G52300.1 CAP160 protein; Swiss-Prot: sp|Q04980|LTI65_ARATH Low-temperature-induced 65 kDa protein; TrEMBL-Plants: tr|A0A1J7HIT6|A0A1J7HIT6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0143900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:52183164..52189379) extracted from Lotus japonicus Gifu genome v1.2.
ATATATTTAATATTTTTTTATTTTTTAATATATTTAATATAAATGTATGAGAGCTTTATGGTTTAATGCATTTAATACAT GCAAAACCTCAAGTCTCCTTTACATATATATATATAGATAGGCTAGAAGTGTGGTATTGTGGTCATTTATTAACATAAAA GGAATTTATTAATACAAATGAAAAAGTGGATAAGAAGTACTCATTAGCAAAAGAACATAAAACAAGCAAGAAAGTAAAAT TGTAAACCAATGGAGCAAACCTTCATAATCCCACAACATATAAATCAATAGAACATTGCTTCCAAGTGTTGATTTTCACA TTATACCATAGAACCACATGGTAAGGATAATCACTATTAGAAAAATGTTTTATCAATTAATAAAAGTAAGTCTTCCAAGC TATCCCATAAGAATTCAAAATTCGTATGCATGTTAACATCTTTACTACCGCCATCTGATATCTAATTTGAAATAGAAGCA CAACTTTTATTTGGAAGACTAGCACAAATTGTTGACTAAAGCTCCTCAGAAGTTATTAGAAATTGGGAGGCCTATACTCA ACCACAAAAGCTAGCTCAACAGTTGAGGTTTGCACTACTCTTGTAAAGGCTATCTATACTTTATCTCTAGCCAATGTGAG ACTTCGAACAGAAGTTGTGTCAGAAGATTCCCTACCAACGTCGTCAACTCTATCAGGAAACAACATCTTCAATCTAAACT CTTTTTGTCGGCGTACAATGAGATCTACAAACCCAACATTTAGACATAGAATTCTTGAAGAATTGTTGCATGACTTGACA ATAACTAAGGGATTGCCAATCACTTTGAATGCCTCGATAAAGACTTTCAAACCCAGGTGTTTCCTTCATTTCTTAAGAAC ATCACAAATTTAAATGGAAATTGAGAATAGATATGCCTAATTCCAAATATATTGCGAATTGGCTCTATATACGTCCCAGA GCTGATGTGAAGCAAACACATTGAGACAAATAATCTGCAGATAAATGATGGTAAGTAATTCGTCACATCTAAGTTTTACT TCCTGATCTAATTTATGGTAGTATATGGATTATAAATTAAGCATGAAAGGATGCTCGCAATGAACTCATGGAAGTGTGTG TGTGGATTCTAGCATCACACTTAACTGATTTATTACTTATTTGATGTCACAGTTATTAATAAAATATTCAAACTATCATA TGTTTATCTTTCAATATAAATATGTTATGGTACCTTACGTGGGACCTAATCAAGGAAATCACAGTTGTTGATCAAAAGAT GGAAAACCCACCTAGAGAGCGAGTAAACATGAATGATTGCAGAGTTGTGTTCAGTTGTATTATGACTTATTAATCCAGAT GGAGAGGACATCACAACGAACTTGAAAAAAACCTAAGAAAAGAAATTCTAATTTCAAGACCCAATTTTGATATGTGGCCT GTCATAAGTTAAATTTTAAGCTTTAGACTGCCTTGTTAGACGGTTTGGCCTAACCTACCGACGTGTTTACAAGTTTGTTT AGCAAAAAATGTGATCTTAAAGAAGTTAGTAGGCCAATGAACCAGTAAGATGCAGACTAATAGGCTAGGGAGCTAACAAA CATTTCTACATATCATTATATTTCTATTTATTTATATTATTAATAAAAATATTATCATGTGAACAACGCGAAGACCGAAC AAGTCATTGATAGTCTGATCCTGACTATTTTAGTTAATCATTTTTTAAAAGGATAATTGTTATATCAATTTCTTTATATC CATTTTATCAAGTATTCCAATCATATACCGACACATGTGCAATTTTTCAAAATTCAAAAATAATTTTTTAATAAATACCA TTTATTTTTAGAAATAAAATTCACTTCACAACAATATTTGAATAAAGTACTTGATAGAAGAAAAAAAAAACACATGAAAC CTGACCCAGGTTTCTTCCTTTTTAAAAAGCTTAAAGATTGTGTGTATCATATGAGATGATTGATATTCAAGATTGGCCAA CAAATTAGACCGTATAGACTCTTAGTCTAGATTTTACCATATGAGATGATTCATATTCAAGGTTGGCCAATGTCATTCGT GTAATCTCATTTAAATTGCACAAAACATATGAAATAACACGAACTTTTTGTTTAAAAAAAACACGAACTTAACTTATCTT CCAAACTCAGAAAAGACTAAAGAGTTTCATATCCATGAGGCTGTTTATTCCTAATAAGGGAGATGAATGTGGAAGAAAAT AGGGATTCGAATTTTTTAGGTTTTTTTTTCTTACAAATGAGTTATCCTATTATCTAAAATTATAGGTTTATTCTTGCAAT TAAATTATTCAATTAAATAAATATTACGAAAATGTAAAATAAAAAAGTATAATTAAGTGATGTGGTTCATACAATAACAT AACACATGTTATAACATGATTGGTACACTTTAGTAATGAGTGACTTTTCCTAATTTTTCTCATGTGTTATTTAAACAACT CCTTATTAATATTTAATATTATCATTATCATCATTATTGTTAAAACAGACAACATTACAAATTTGTTGGGTAACCGTTTA TTCTAATTTCAAAATCTTTCATGCTGTACAAGACACGTACGCAAACCAGGAAACACGTGTCAAGTAACAAAGACGTGTTA GTCATGACACACGTGTCACCAGCTTTGAAATGCCACAACCATGCAAAGGTGGCAATGTCCTTATCTATAAACCGTTCCAA GGCTTCTGAACTTTCCATATGTAGTTACTTTCCTCAACGAGCATAAGCAATTGAGAATTTACTTTTCCATTTCAATCAAT CATGGACACCAAAGCAGTGCAGAGTCATGGCCATAACTACGATCAACATCATCAACCTCATAATGTTGGCTTACAACAAG GTATCAATCTGAATTCATCTGAACTTTGACTTGTTTTTTCACTAATGGGGATGCATTTTTATGTTTCTTTGTTTCAAATA TGAATTGTAGGGGGGCATGGTATGGAAGAGCACAACCATGACCATGAGAAGAAGTCAGTTCTAAAGAAAGTCAAAGCAAA GGCTAAGAAAATTAAGGACACAATCACGAAGCATGGCCATCATGACCATGACCAGGAACATGGTCCTGAGTATCACCGTG AAGGTCACCATATCCCTGATGAACATGACTTGGATCAGGAAGATGATGAGGATGAGGAAATGGTGCAAGACCCAGAAATC CATGGAGCACCAAGTATGTTTTTTTTTTTAATACACAAGTCATTACTTATTCAATTCCATTCTTGATCTGGTGAAATTGA ACCTATCTTATGTTTTCTAGAAATTTTCTGCAAGATAAATTGGAACCTTTTGAATAAAATTAAAGGAATCAAGAAATCAT GTTGATCTCACTTAAGTGTAACAATATGCTTGGTTTTGTTCTGTGCAGTTTATGATAGTACTGCTGTTACAAGTGCCGCC AATAGGCCAGGGCAAGTTAAAACTTCAGAGAGGCCTAGAGTTAATTTTGGAGGTGCAAATGTTGTGGGGGAAAAACCTCA TCATGAGCCAAGAGTTGTAGTTGTTTCCCCTTCCACTGAAATTAATCAAAGCAGATCCACTGGTCCAGCCAGAACATTTG TTGAGGCAGGGAGAGTAGAACAACCTAATGTCAATTTGGTGAGACCAATGGACTTGGAGGCAGATCCTCATGCCCCAGGA AATAGACATCCAGCATATGCTTCAGCCAATTATCAAACCAAAGTCACTGATCCAACTGGAGCAGGTGAGGACAAAGATTG AATAAAATTGCATAACTCAGTTTTTAATGATTAATATGCAAATTCACTGATCCAATTATAGTGTTCTATGTTCTGACTTC TATTTTATCATATCTTATCTTATGGCTAATTGCGAACAGGTGGTGCAGAGATCAACATTAACCCAGTTCAGAAATCCTTG GAAAGGATGACTATTCACAATGAGCCAAAACCTATCCCAGAACCAAAAATCCTTCCAACTATTGCTGAAACTCAGTCCCC TGCTGTTGGTGGCAACAAGCAATTTGTGCCAGGGTTATCTACTCCAACAAAAACTCATTACCCATCTGCTGAAACCCATG GCCAAAACTTACCAGAACTATCTGGTGAAATTAAAACTCACTACCCTAGAAGCCATGATCAAGTTATGCCAAATCCTATC TCACAACCAAAAATCCTTCCAACTCAGCATCCTTCTACTGGTGGGAGCCACCAGCAATTTATGCCAGAGGTATCTTCTAT AACGAAAACTCATTACCCATCTGCTGAAAGTCATGGCCATATCTTACCTGGATTATCTAGTGAAATTACTAATCACTACC CTAAAAACCATGATGAAGTTATGCCAGATCTTACTCCTTCAATCAATACTCATGAACCTTACCCTTCTGCTATAAGACAT GCCCAGAACCTAACAGGAGTGTCTAGTGCAACAAAAACTCATTACCCTTCTACTGGAAGCCATGATCAGTTTTCACCTGA GTTACCAATATCAAGTGAACCTAAACCTCAATACCCTTCTGCTAGAACTCATGACCAGTTCAATCCACAACATTCTAGTG CCACAGAAACTCATTACCCTTATGCTGGAAGCCATGGTCAGTTTGACTTACCAACTGAACATAAACCCCAACACCCTTCT TCTAGAATTAATGATCAATTCATGCCGTCACAACATGCTAGTGCAACATATACTCATTACCCTTCTGCTGGAAGCCATGG CCAATTTGCACCAGAGTTTTCTACTCAAATGAAAACAGGACAAACCGTGAACAACCCTACCCTCCCCAAAGTTGAAGAGC AACCTCAACCAATGGAGCAGCAATCAAACCAAACCAGTTACACAGACAAAATCTCCTCCGCAACCTCTGCCGTCACTAAC ACAGCAATAGGTGCCAAAAATGCCGTAGCTAACACAGCAATAGGTGCCAAAAATGCTGTCACTGGCACAGCTATAGGTGC TAAAAACGCCGTCGCAGCGACACTCGGGTACGGCGAAAAGGGTGGTGACAACACAGAGCAGAACGAATCGAGCCAGGGCA GTTACACAGAGAAAATCTCATCAGCAACATCAGCAATAGCCGACAAAGCCATCGGTGCTAAGAACACAGTAGCCTCCAAG CTAGGATTTGGCGAGAGCAGTGAAAGTGGCGAAAACGCTCTGAGAACACAGGAAGAAGAGAAAAACGAGGGGTTTTCTTC TACCACAGCGACAGGGTCTGCTGCTGAATATGGAAAGAGAATTGCTGAGTCTTTGACAGAGAAACTGGCTCCAGTTTATG GAAAGGTAACTGGAAGTGGAGTGAAGTCTGAGGTTTCTGAAAGTGGGGTTGTGGAACAGGATAAAGGGGTTTCTGTGAAG GACTATTTAGCTGAGAAGGTGAGGCCTGGAGAAGATGACAGGGCTCTGTCTGAGGTGATTTCAGAGACATTGCACATGAA GGGTGATGAAGAGGGTGGAGTTGTGGTGGAAGAGGAGAGGGATGTGAGAAGGGTGGTTTCTGATGCTGTGCATAAGAGAG GAGATGAGAGTGAGGGGAGAAGAAGAGTGCCATTGGGGAAGGTGACAGAGTCTGAAGAGGTGAAGAGAAGGTTGGGTGGT GAGGATAGGGAGACTGAGAGAAGGTATGAAGAGAGCTATGTGAATAGCCCTGGAGAGGGTGTGGTTGATAAGGTTAAGGG GATGGTTGGATCATGGTTTACAAAACCTGTGGATAATCAATCATCATCACAAGGTAATGTATACTATATAGTCTCTATTC ATTCCAGTTTTTTGGTTCTTGCTTTTACTCCAAAGTCCAAAATGAAACCTGGATGGTTTCTCTGAATTATGAAACCAATC AGAGATTGGAGTCGCATTTGTTTTTGCATATAATTATGTGTGTATTGTGATTTTGATTTTGGTTTCTTTGGCAGGAGATG AAGTTCTGTCTAGGAAATCTGGAGCAGAAGACAAACAGTTTAACCAAGCTACAGGTGAAAGAAGATTCCAGGGGTCGTCT AATTGAAGAATTGCTTTCAGAGAATCATTATAGTACTTGTGTATTTCCTTTCTTTTTTTTCTTTTTTTTTTCAAGTGGTG TTTGTGTTATTGTGTAGATGTTGTGATTTATGTAATGAATGATATTGCCAAGTGCATGTTCAGACTTCAGTGTAGCCTTT TAGAATTTGTCACTTTGAATATAATGATAGTAAGATATTTGGATTTTAACCCATTG
CDS sequence (LotjaGi2g1v0143900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACACCAAAGCAGTGCAGAGTCATGGCCATAACTACGATCAACATCATCAACCTCATAATGTTGGCTTACAACAAGG GGGGCATGGTATGGAAGAGCACAACCATGACCATGAGAAGAAGTCAGTTCTAAAGAAAGTCAAAGCAAAGGCTAAGAAAA TTAAGGACACAATCACGAAGCATGGCCATCATGACCATGACCAGGAACATGGTCCTGAGTATCACCGTGAAGGTCACCAT ATCCCTGATGAACATGACTTGGATCAGGAAGATGATGAGGATGAGGAAATGGTGCAAGACCCAGAAATCCATGGAGCACC AATTTATGATAGTACTGCTGTTACAAGTGCCGCCAATAGGCCAGGGCAAGTTAAAACTTCAGAGAGGCCTAGAGTTAATT TTGGAGGTGCAAATGTTGTGGGGGAAAAACCTCATCATGAGCCAAGAGTTGTAGTTGTTTCCCCTTCCACTGAAATTAAT CAAAGCAGATCCACTGGTCCAGCCAGAACATTTGTTGAGGCAGGGAGAGTAGAACAACCTAATGTCAATTTGGTGAGACC AATGGACTTGGAGGCAGATCCTCATGCCCCAGGAAATAGACATCCAGCATATGCTTCAGCCAATTATCAAACCAAAGTCA CTGATCCAACTGGAGCAGGTGGTGCAGAGATCAACATTAACCCAGTTCAGAAATCCTTGGAAAGGATGACTATTCACAAT GAGCCAAAACCTATCCCAGAACCAAAAATCCTTCCAACTATTGCTGAAACTCAGTCCCCTGCTGTTGGTGGCAACAAGCA ATTTGTGCCAGGGTTATCTACTCCAACAAAAACTCATTACCCATCTGCTGAAACCCATGGCCAAAACTTACCAGAACTAT CTGGTGAAATTAAAACTCACTACCCTAGAAGCCATGATCAAGTTATGCCAAATCCTATCTCACAACCAAAAATCCTTCCA ACTCAGCATCCTTCTACTGGTGGGAGCCACCAGCAATTTATGCCAGAGGTATCTTCTATAACGAAAACTCATTACCCATC TGCTGAAAGTCATGGCCATATCTTACCTGGATTATCTAGTGAAATTACTAATCACTACCCTAAAAACCATGATGAAGTTA TGCCAGATCTTACTCCTTCAATCAATACTCATGAACCTTACCCTTCTGCTATAAGACATGCCCAGAACCTAACAGGAGTG TCTAGTGCAACAAAAACTCATTACCCTTCTACTGGAAGCCATGATCAGTTTTCACCTGAGTTACCAATATCAAGTGAACC TAAACCTCAATACCCTTCTGCTAGAACTCATGACCAGTTCAATCCACAACATTCTAGTGCCACAGAAACTCATTACCCTT ATGCTGGAAGCCATGGTCAGTTTGACTTACCAACTGAACATAAACCCCAACACCCTTCTTCTAGAATTAATGATCAATTC ATGCCGTCACAACATGCTAGTGCAACATATACTCATTACCCTTCTGCTGGAAGCCATGGCCAATTTGCACCAGAGTTTTC TACTCAAATGAAAACAGGACAAACCGTGAACAACCCTACCCTCCCCAAAGTTGAAGAGCAACCTCAACCAATGGAGCAGC AATCAAACCAAACCAGTTACACAGACAAAATCTCCTCCGCAACCTCTGCCGTCACTAACACAGCAATAGGTGCCAAAAAT GCTGTCACTGGCACAGCTATAGGTGCTAAAAACGCCGTCGCAGCGACACTCGGGTACGGCGAAAAGGGTGGTGACAACAC AGAGCAGAACGAATCGAGCCAGGGCAGTTACACAGAGAAAATCTCATCAGCAACATCAGCAATAGCCGACAAAGCCATCG GTGCTAAGAACACAGTAGCCTCCAAGCTAGGATTTGGCGAGAGCAGTGAAAGTGGCGAAAACGCTCTGAGAACACAGGAA GAAGAGAAAAACGAGGGGTTTTCTTCTACCACAGCGACAGGGTCTGCTGCTGAATATGGAAAGAGAATTGCTGAGTCTTT GACAGAGAAACTGGCTCCAGTTTATGGAAAGGTAACTGGAAGTGGAGTGAAGTCTGAGGTTTCTGAAAGTGGGGTTGTGG AACAGGATAAAGGGGTTTCTGTGAAGGACTATTTAGCTGAGAAGGTGAGGCCTGGAGAAGATGACAGGGCTCTGTCTGAG GTGATTTCAGAGACATTGCACATGAAGGGTGATGAAGAGGGTGGAGTTGTGGTGGAAGAGGAGAGGGATGTGAGAAGGGT GGTTTCTGATGCTGTGCATAAGAGAGGAGATGAGAGTGAGGGGAGAAGAAGAGTGCCATTGGGGAAGGTGACAGAGTCTG AAGAGGTGAAGAGAAGGTTGGGTGGTGAGGATAGGGAGACTGAGAGAAGGTATGAAGAGAGCTATGTGAATAGCCCTGGA GAGGGTGTGGTTGATAAGGTTAAGGGGATGGTTGGATCATGGTTTACAAAACCTGTGGATAATCAATCATCATCACAAGG AGATGAAGTTCTGTCTAGGAAATCTGGAGCAGAAGACAAACAGTTTAACCAAGCTACAGGTGAAAGAAGATTCCAGGGGT CGTCTAATTGA
Protein sequence (LotjaGi2g1v0143900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDTKAVQSHGHNYDQHHQPHNVGLQQGGHGMEEHNHDHEKKSVLKKVKAKAKKIKDTITKHGHHDHDQEHGPEYHREGHH IPDEHDLDQEDDEDEEMVQDPEIHGAPIYDSTAVTSAANRPGQVKTSERPRVNFGGANVVGEKPHHEPRVVVVSPSTEIN QSRSTGPARTFVEAGRVEQPNVNLVRPMDLEADPHAPGNRHPAYASANYQTKVTDPTGAGGAEININPVQKSLERMTIHN EPKPIPEPKILPTIAETQSPAVGGNKQFVPGLSTPTKTHYPSAETHGQNLPELSGEIKTHYPRSHDQVMPNPISQPKILP TQHPSTGGSHQQFMPEVSSITKTHYPSAESHGHILPGLSSEITNHYPKNHDEVMPDLTPSINTHEPYPSAIRHAQNLTGV SSATKTHYPSTGSHDQFSPELPISSEPKPQYPSARTHDQFNPQHSSATETHYPYAGSHGQFDLPTEHKPQHPSSRINDQF MPSQHASATYTHYPSAGSHGQFAPEFSTQMKTGQTVNNPTLPKVEEQPQPMEQQSNQTSYTDKISSATSAVTNTAIGAKN AVTGTAIGAKNAVAATLGYGEKGGDNTEQNESSQGSYTEKISSATSAIADKAIGAKNTVASKLGFGESSESGENALRTQE EEKNEGFSSTTATGSAAEYGKRIAESLTEKLAPVYGKVTGSGVKSEVSESGVVEQDKGVSVKDYLAEKVRPGEDDRALSE VISETLHMKGDEEGGVVVEEERDVRRVVSDAVHKRGDESEGRRRVPLGKVTESEEVKRRLGGEDRETERRYEESYVNSPG EGVVDKVKGMVGSWFTKPVDNQSSSQGDEVLSRKSGAEDKQFNQATGERRFQGSSN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 93 | 93 | - | – | |
| MobiDBLite | 1 | 16 | 16 | - | – | |
| PANTHER | 1 | 335 | 335 | 4.3E-164 | ||
| PANTHER | 1 | 335 | 335 | 4.3E-164 | – | |
| MobiDBLite | 30 | 44 | 15 | - | – | |
| MobiDBLite | 58 | 86 | 29 | - | – | |
| MobiDBLite | 121 | 142 | 22 | - | – | |
| MobiDBLite | 347 | 386 | 40 | - | – | |
| MobiDBLite | 402 | 479 | 78 | - | – | |
| MobiDBLite | 402 | 420 | 19 | - | – | |
| MobiDBLite | 429 | 453 | 25 | - | – | |
| PANTHER | 483 | 562 | 80 | 4.3E-164 | ||
| PANTHER | 483 | 562 | 80 | 4.3E-164 | – | |
| MobiDBLite | 512 | 543 | 32 | - | – | |
| PANTHER | 587 | 856 | 270 | 4.3E-164 | – | |
| PANTHER | 587 | 856 | 270 | 4.3E-164 | ||
| Pfam | 601 | 626 | 26 | 7.9E-15 | ||
| MobiDBLite | 624 | 656 | 33 | - | – | |
| MobiDBLite | 749 | 803 | 55 | - | – | |
| MobiDBLite | 749 | 795 | 47 | - | – | |
| MobiDBLite | 816 | 856 | 41 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Response to abscisic acid | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus. |
Expression pattern of LotjaGi2g1v0143900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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