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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0145800 |
| Transcript ID | LotjaGi2g1v0145800.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptidyl-prolyl cis-trans isomerase; TAIR: AT5G52200.1 phosphoprotein phosphatase inhibitor; Swiss-Prot: sp|Q4L5U1|RIMM_STAHJ Ribosome maturation factor RimM; TrEMBL-Plants: tr|I1MPZ3|I1MPZ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0145800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:52534544..52536355) extracted from Lotus japonicus Gifu genome v1.2.
TGTAGGGGACGTGTAAAGTGGGATGAGGATAACATTGGAGAAATTGAGGCAAACAAACCTGTGAGGCAGAAAATTACTGA GCCTAAGACTCCATATCATCCAATGATTGATGACGACAGTATGTAAAGAAGATAACTTAAATTCATGTTTCCATTAATTA AATATACATATATGGCTATAACTGTTTACACAAAACTTTCCTTTCATGACTAAATTCTAAAATATATAGGTCTTGACATG GTTTTGTTCCTAAATGTAAAAACAACATATTAGCCTAACTCTGTTGGTAGAATTGCATTGGAGATGTGTATTTGAAGTTT TATTCTTAGGCCTACTTTTTTGCTAGGTTTAGAGAACATTGTATGTGAAGCGACTCTTATTCTGACATAACCTATTTTTT TAGATTCTGGATCCCCTGTGCGAGGAAGTTTTGATGCATGTATTGATGATGAAAATCAGACAAGGCATGCTGAAGCAATA TGGACTGCTCTGAATGACGTAGCATCCAGTAGTAAAAAAGACACTGGACAATCTGGTGGTTGGACATCATCCGAGGATGA GCCAGATGCAATGGAACAAGATGATGATGGTATAATACTAATTATTTGATCTTCATCTGGTGTGTGTGACAAAGATCATT GTCGTTTAGTGTTTTTATCACGATGGTTACTCTTAATGCATGTTTGTGCTTCTTCAAGAGAATTTCAGTTTTAATGACTT ATTTCTGATCCAAATAATTGAAATCTTTGAATAATTATAAATATTACCTTGGGATAAATTGATTTTAACATGAATGAATT ATAGTGTGGGAAAGTCAGGCTATAGTATATACTTCTGATCTGTCAGCAACATGTAATGTGGGATTCCTGCATAGATACTT ATAGAATCAAGAGTTCCGAAATAAGTATGAATAAATATGGCTCACCTTGCGCACGTTTTTAAGTTTGAAGTCTTTTAGTA TCGGAAACAAGAATGGGAGTTGCTTGTTGCTGCTGTGAGATTTCCTAATATTTCTGAACCAATAATTTTATGTACGTGAA CATCATAGTTATATAAGATGGGTTAACTGTATTCTTCTATGGAAGACAGAAATTTTTGTATAGTAACAAGTATTTCACTA TTTCAGTTTTTTATCTTATGCCTATCATAGTATCATTCACACTGTTCGATCTGTAAGGTTGATAAGTGCTTATTTTTGTG TGGGACTGGGAAAAATGTCAGACTTGGAGGCTGCTCCTATAATATCCAATCATTACACTGTTTTGAATTTCAGTTAACTC TGATAATGAACTGGGATCTATTTTCAATTAGATAGGGGAAACAAGTTTTTGGAATATTGTCTTTTCTTGCTCTCATGAAG GGAGGTTCTTTCATTTTGTGGAGCAAGAAACTTTTTTTCTTGCCATTTCATGACATGCCTGTTTACAGGGATATCATGAT AGAGTCTAGATTAATTTATTGAATTTATTTGTTTATTGTATTGATAAATTACTTATTCTTCTACTTACCTAACTTGTATA TTCCTGGGTTGGTATACTGTTAGATTCTGAATCAGATAGGAACTTAGCTTTCAAAGAGCACAGAAAGGCCCACTATGATG AATTTCTTAAAGTCAAAGAGCATCGACAAAAGGCTTCTCTTGAGGACGAAAGTGATGAGGATGGTGATGCTGAACCTAGT AAGGGGGAGAAGAAATGTGAATCATCTTCGCTGAGTGATAGTGTGAAAGAGATGGACATTGAGGGTAAAAAGTCTTCCGC GCCTCCAGCTAATGGTTCTTAGGCAGTGATCAACTAATAAAACCCACTTTCA
CDS sequence (LotjaGi2g1v0145800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTGATGACGACAATTCTGGATCCCCTGTGCGAGGAAGTTTTGATGCATGTATTGATGATGAAAATCAGACAAGGCA TGCTGAAGCAATATGGACTGCTCTGAATGACGTAGCATCCAGTAGTAAAAAAGACACTGGACAATCTGGTGGTTGGACAT CATCCGAGGATGAGCCAGATGCAATGGAACAAGATGATGATGATAGGAACTTAGCTTTCAAAGAGCACAGAAAGGCCCAC TATGATGAATTTCTTAAAGTCAAAGAGCATCGACAAAAGGCTTCTCTTGAGGACGAAAGTGATGAGGATGGTGATGCTGA ACCTAGTAAGGGGGAGAAGAAATGTGAATCATCTTCGCTGAGTGATAGTGTGAAAGAGATGGACATTGAGGGTAAAAAGT CTTCCGCGCCTCCAGCTAATGGTTCTTAG
Protein sequence (LotjaGi2g1v0145800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIDDDNSGSPVRGSFDACIDDENQTRHAEAIWTALNDVASSSKKDTGQSGGWTSSEDEPDAMEQDDDDRNLAFKEHRKAH YDEFLKVKEHRQKASLEDESDEDGDAEPSKGEKKCESSSLSDSVKEMDIEGKKSSAPPANGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | - | – | |
| PANTHER | 17 | 131 | 115 | 5.2E-16 | – | |
| PANTHER | 17 | 131 | 115 | 5.2E-16 | ||
| Pfam | 22 | 102 | 81 | 6.1E-11 | ||
| MobiDBLite | 34 | 142 | 109 | - | – | |
| MobiDBLite | 35 | 55 | 21 | - | – | |
| MobiDBLite | 66 | 98 | 33 | - | – | |
| MobiDBLite | 106 | 132 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein phosphatase inhibitor activity | Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from phosphorylated proteins. | ||
| Biological process | Regulation of signal transduction | Any process that modulates the frequency, rate or extent of signal transduction. | ||
| Biological process | Regulation of phosphoprotein phosphatase activity | Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein. |
Expression pattern of LotjaGi2g1v0145800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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