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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0148900 |
| Transcript ID | LotjaGi2g1v0148900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | F-box protein; TAIR: AT4G00755.1 F-box family protein; Swiss-Prot: sp|Q8LG03|FB345_ARATH F-box protein At4g00755; TrEMBL-Plants: tr|I3SPR0|I3SPR0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0148900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:53523844..53530415) extracted from Lotus japonicus Gifu genome v1.2.
CAACGGTTAAAAAATGTTTCTTATAAGTAGATCATAGAAACACAAAATATATTCCTTCCAGAAGCATCATTTGTCCTTGA GACACACTGCAATTCCAAACACAGCCAATCATTCAGCTGCTTCCATTCCCATTTTCTGACAACCATCCTGAAACAAGGAT CCACCCTCTCTTTGCTGAAAGGTAACTCCTTTTCCATCTTTCATATGTTCTCTCTCCATGCCCATGAATTCATGTGCTGC ACTTTCTGCGTGAAAGTTTGCAGCTTTTCACTTTTCCCTTATGCCTGCATCAATTACCTTCCCCCTTTAATTTTTGGTTC CTGCTTTTGTCAAACTCACAGTGAAGCAATTTTGTAAAGTTTATATAACTTTTCTCTTAGGCCATCTGTTAATCATGTTT GTGGGTTGCCAAAAGTTTCAATTTTTATGTTCCAGTGCTTAAATTGTAAGAGGATCCTTATTTTTAATGAAGAAAATAAT TTCAATTTATTAATAATATGCAATTCTCATTGTATTCCTCCAAAGTTAATCGATTTATTTATGGTGGAAGTGGTTGCTTG GAGAAACTTTTTCCAAATTGCCATGTGATTTTTTTCAGTTTGTATTATGATATTAGTATTTGTTGCATTGAGCTTCAGCT GGTTTGCTTGCTACCAGGCTCTGACATTTGGAATATGTCTGAAGTGAAAAACAATGTGGATTTCATCCAATTGCTTGAAC CTGACATGTCAATAAAGATTCTAAACCATTTGGATGATCCTTGTGACCTTGTTCGTGTTTCTATTGTTTCCAGTTCTTGG CACAGATTTGGTAAGGCTTTTGAGTTTAATTAAGTTGCATTGGTAGAACTTTATGGTGCTTTGGACTTTTAGTCCAAAAT GTGTACATTTTCTTTACTTGAAAGCTTGCTTTTTTTTTTTCGGAAAGCTTTTAGGTATGCTAAATTAATTTTGTGTGGTG TGTTGACTTCTAAAAGTTTAACTTCTCTGGTTCAATGTTGTCCTGTAATTTTATTTTTTCTTTTCTGAAATTGGGTAAGC CCTGGTTTCTTCTTCCAAGGTTAAAATGTATGGGAGTAAGTAGCTTATTGTTCATAGGCTTTATTTTTCTATTCAAATGG TGATAATATGCGCTCTAAATGTTCTGCAGTTATTGAAAATGGCCTTTGCAAGCGACTTTGCTTAAGAATGTTTCCTGAAA TATCTCATGTTGCTCATAGCATTGAGCTAGGAAACATGATTGAACCAGTATGTAACGTGCTTGACAATTGGGAGTGTCTT AAGAGAAATCATAAAGTGTACGCATTCCTGGCTTCTGGTCTGACTCCTACTTGGAAAAATTGCATCTCAGAAGCAATTAG TGCATCCAGCACTGATAACTACCCTGAAGAAAGCATTCAGAATACTTTGGAGCCTAGGGATAGAACTGAAAATAGATTAT TATACTGGTCAAGTAAAGGAGAAAGCGATCCATCTGTTCCTGAGACTTTAGGTTATCAGCTTATTTCCAAACTATGTCTT GTTACAGAAATTCATGTCCAACCATTCCAAGGTTAGCCTGGTAGCTAAGTTGATGAGTTGTGTGCATATCTAGTTAAACT GAAAAACAAGTAATGTTGAGGATCCCGAGCTTTTACTTAGTCAGCTGACAAATTATCTATGTTTACTTGTCAGCGTATTT TCAGCATGGCTTCCCTATATATTCAGCTAAGGCTGTCCGGTTCAGAATGGGCCATCCAAGATACCCAATGGAATTAGAGA GTTTAGTAGCTGATGATATGGCTGCTAACCGCATGCTAGGGGATAGCCAATTCATATGGACATATACTTCACCTGAATTT CCAATGTTTCAGGTGAGTTGCACTATTAGAATTCAGGCTTTACATACTCTTTTTTTACCATTTCAAATAAGTCAACAAAG AGTGAACTTGATATTGATCCACTGTTTTCTTTTCCGGGCATCATCAACTTCTTTAAGTAATTCGCATCCTTGGTTTAATG GTATTTTTCTATTCTGTCTAAATATTGTTATATAATTTAATGCAATTCGACCATGAAACTTAACCTTTTATGGATTGTGG TTACTGTCTCTGATAGGGCCTAGAAGGTAGTTAGTTAAAATAGTTAAGTGGTTGTGTGGCAGTTGTTAAAATTGTTACAA TTAGGTAGGGACTAGTGTAAATAGTAGGAGAGGGGTGGAATAGAGGCATTTAGACTTGGTATTTTGGATACAGTGAAGTG GCGCTCACTTGTAAATAGGGAACCTTATCTCGTTTTTCTATTGCAATTGAATAAACTTTTGTAGATTTGCTCTCTCTCTC TCTCTCTCTCTCTCTCTAGATTTTCCAGTTGTTTCTCTTGTGGATCATAACAATTTGGAACAACCTGCCTGATCTCATTT CCGGGGATGACATAACTTAGAATAAAAATTCTATAGAATTCAGTGATGTTCTTGAAGAAGACAACTAGCACGCATGTTCT CTGGATGCTCATGTTGGATGTGAAAGGAAAAGGGCTATGTGGAGGTCATTCGACAATTGCTGGATGGGTAGATGAAGAAA CAAGGCATTAGCCTTAGTGGGAATAAGACAATGCACAGACCTCCATGACATGTCAAGTTCACAGCTGGTGAAGGACAACA CTGGGATGCAACAAAATGGTAATTCTCAGTTGAACTTTGATAAGTCCTCAATGTGAGCAAGAAAGTTCAATTACCTAAGT TGGGTCATAGTGACCTGAAGGGATGAATTGATTGGGTGGATAAGTTTTAAGGTGCACGGTGCACCTGATGGAGCTGATGA CAGGTATAAATTGCATTTATATGCATGGAAGGTGTAGCAATGCATTGGTTCTCATTCTTGAAGAGGAAGATGCTGGCCTT GACTTGCTAAGTGTTTACAGCAGTGTTGTTGATAGAACCGGTTCATAATTCACAAGAAAATATTCTGTTTTATTGACTCA GTAATTCTATTGATTGACTATACTTATCATGTTGGTTCAAAGGTTTTCAGGAAGAAACACGGGCAACATGTAATTGTGTA TGAAAGATTGGCCACCTTGTAGCAAACAAGATCTTTAGATGAGTATAATACAAGCTTTTGAAATCATGATGTGACAAGCG TTGGGAGATTCAAGAGGAACAACTGCTGTGGTATTTCTTGGGTGGATTAAGAAGCAATGCGAATCACAGTTCAGATGCAT GATCCTAATGATATTAAGAAGGCCATAAATCTGGCCTGAAATATCAGAGGTGCCACACATGCCTCCACATTCCTGTTGAG ACCTCAACCCTTGCTATCAAGATGCACTTCAAGTATCATTTGGGCCGAGGAATTTGTCAAGAATGGGACCAGTTGGTACA GCTACAGTGGATTTAACTAGCCTGCTACAGGGAATCTATCATCAGACTCATTCAAGTGTAATACTGGATCAAACAATGAC TTTGTAAAAGTTGTACAAGGGGAAGTGGAGCAATGATGCACTCCGTCACTAAGCCGAGTGGAAGTATCATGCACCTGTTA CAAAGCAAGGGAGCTAGCCCTATCAGGAATATGTTAGGAGAGAAGAGGGTGGATGTTTTTAGTGTAGTCAATGATTTGGT CCCGTGCATAAGAGCTAGAAAATGAAGTGCGATAATAGGCAGAAGATAAACTAGTGGATGAGGAAGGAGAGGTTGTTAAT ATGGAATCTCTTAGGAAGAAGAACAATAGGAAGGATATGGGCACTAGTGGATGTCATTTCCCCAATTTCAACCTTGTTGA TGAGGTTGAACTTTTAAGAGGAGGGTGTTGTGGGGCAAAGAGTTCTTGGTTAGAATAGTGAGTGGTGCTAGAAGTATAAT ATAGAATCATTCATGTATCTTCACCAAACAACTTCAATTTTTTGGGATAGTTAGTTCATGAAATAGTATGAGAGCTTCTA TGACAAAGTGGTAAAGATTTGGATCTTTATTTATGCCATTATTCTGATAAAAAAAGTTGAGTTTCATGACAAGGTAGGTA AGCTTGTGCATTGTCCATATTTCAAGCCTAATGGGCTCTTGTATGAGGGGGCGTGTTAGAAGTTTAATATAAAATCATTC ATGTTTCTTCAGCTAACAAGTTAAACTTTTAGGAAAGTTGGTTCATGACAAGTGGTGTGGTGGTTAAAGTAGTTAAAGGT AGGGACTTAGCTTAATTAGTAGGAGAGGGGTAGAAGAGGAGTATTCAGATTTGTTAGTTTTGGATAATGGCCCAGTTGTT GTTGAGAAGTCTCACATTGACTAGAGATATGGTCAAAATAGTCTTTATATAGGGTAAGCACAATCCTCAGACCTCATCCC TGCTTTTAGGGTAGAGTAGGGCCTAACCCAAATTCTAAGATGTATGTGAGTCTATCCTAGATCCGTTTAGTGGAGAAGAG ATACCCATATATGGGCCACCTGCAGATGCTCATTCATGCAATTTCCGCACTCCAGATGTTCAACTTTGACTGTGAGGGGG TGTGTTGAGAAGTCCGACATTGCCTAGAGATATGGCCAGAATAGTCTTTATATAAGGTAGAGCAACCCTCACCCCTAAGC TAGCTTTTGAGGTAGAGTCAGGCGTAACCTAAATTCTAAGAGTTGTTAAAGGGTAACCTTGGTTGAAGGGTAAACCCTTT GAAGTAGAGCTCTCTCTCTCTCTCTCTGTTTGGTCTTCGATAAACATTACAGATTTATTCTCTTTCTATTATTTAAATTT TTCATGTCTTTCTCTTGTGGGTTCATGCCAGTCTCTTAGTAATTTGCAGATCTTCAGCTTTAATTAATTGGCAGTACGAG CCTATTATGAAACTAATGCGTTAAGGTCCCACGTTGACTAAAGATATAACCAAATAAGTCCTTATAAATAGTAGAACAAT CCTCAACCCTGAGCTAGCTTTTGGGGTAGATTTAGTCAACCAAATTCTAAGATTCTAAGAAATAAGAATTACCACTTAGG ATCTTTGTAGTCCTCTTGGGTTGGAGCAACCTCATGCTACCAACTTAAACCTCTTTTTTTATTATAAAATATTTTATGCA TTGTGTGAAGCTTGGAATGTGTTAATCATGTACTAACTACAGGAAAACCGCTTGCAAAAATTCAAGCTACCTGAACCTGT CCTGTCAATTGGAGGTGTGCTGCTTGTTGAGCTATTGGGAAGAGTTCAAAAACAAGAAATGGATGAATTGTTCTACATAT GGTTAGTTTCTCAAAACTTCTCTCTCCCTCCTTCACATTCATACACTGTTGTTTAGCTTAAATACATATTGAAGACCATT ATTATTGAATTGAAATTGTGTTGGTGACACCTGCTCTTCCTTGACCTCTGTCCACTCATGAGTCATGATAAGGTATTGGA AAATGAGGCGGTTTCCCCTGAGAGAAATTTTTTCCATAATATAATAACATTTAAAATTTGTACTCTGATAGGCATCGACC TCCAATTAGTGAGGTCTATGAGAGGAAGAATAAGAGGAAAGGGCTGGGAGTTAGTGTTCCCTGACTTCTCCAGCAGTACT AGAGTGTAACTTTAACTAGTAAGTAATTAAGTGGCAAGGTTATATGGTCAGAAACAGTTAGGCAATTTCTGAGTAGAAGG AAGGGAAAGATTTGATTCTCGAAACAGTTAGGCAATTAAGTGGCAAGGTTATATGGTCAGAAACAGTTTCCAACATGAAC AAATTTCCTGACTCTTATGTCTAGTGACTTGTCTTGGTTTCCTAATATTAAGTAATTTTTTCTTGTCAGAAAAAAATATC ATCTATTTGCTTATCTGTTTTCCAACTATGATAAATTGGACTACTGTGGTGCAGCATCTCCCATGTTCAAGTTGTGGGGC AGCCGCTTTCACCCGCATTTGATATTAAAATTCATCACCCATCAGGAAAGTGTACCCTGAAATACTTCCCTCAAACCGAT TGGTGTGTGCCTTCAACATCATCACCGACAATAGAGTCAAACAATCCTTCGCGCCTGCGGTCATTAATGCAGAGTGGTGT TAGACGTTGGGAGCAGATTATCTTGGGTGCACTGCTTGGTTCTGGATCTGTTGCAGTTGATGATTAATACAGTGCAGGGA ATCAAGTAGCTCAATTCTCAGAAGACATTTTAAAAACTGTGTACTTGTGAGTGAGATTTGGTTGGCAGATAAGATATCAC CTCAAATTTGTGCAAACCTCTGTAGAGTATATGGTCTGCACAGTTGTATCAATTTCTCATTTCTCAAAAATCAATTCTTT AAAGTTTTTCCTCATAATTGATTGACTTTAAAATCAATTGTAAAAGAATTTTCAAAAATGCACTAAGTAGGGGTAGTTAG CATTCCTTCATCTGACATGAAATCTTGACTTCTTGGTAAGTTATCATTGAAGAGATCTCTGTCAATGATAAGTACGTTGA ACATTTCTTCCACTTCTTATTCTTAACAAATATGTGATCGAACCTGGTGACTTTGATGCACATCATCTTGAATATATTTT GTTCTTCCTAAATATTATGTAAGCTGGATTTCTTATAATAGAGGGGATAACATCCTTAATTATTAAAATCAGGTTTCTGA AAGGGATTGTGG
CDS sequence (LotjaGi2g1v0148900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGAAGTGAAAAACAATGTGGATTTCATCCAATTGCTTGAACCTGACATGTCAATAAAGATTCTAAACCATTTGGA TGATCCTTGTGACCTTGTTCGTGTTTCTATTGTTTCCAGTTCTTGGCACAGATTTGTTATTGAAAATGGCCTTTGCAAGC GACTTTGCTTAAGAATGTTTCCTGAAATATCTCATGTTGCTCATAGCATTGAGCTAGGAAACATGATTGAACCAGTATGT AACGTGCTTGACAATTGGGAGTGTCTTAAGAGAAATCATAAAGTGTACGCATTCCTGGCTTCTGGTCTGACTCCTACTTG GAAAAATTGCATCTCAGAAGCAATTAGTGCATCCAGCACTGATAACTACCCTGAAGAAAGCATTCAGAATACTTTGGAGC CTAGGGATAGAACTGAAAATAGATTATTATACTGGTCAAGTAAAGGAGAAAGCGATCCATCTGTTCCTGAGACTTTAGGT TATCAGCTTATTTCCAAACTATGTCTTGTTACAGAAATTCATGTCCAACCATTCCAAGCGTATTTTCAGCATGGCTTCCC TATATATTCAGCTAAGGCTGTCCGGTTCAGAATGGGCCATCCAAGATACCCAATGGAATTAGAGAGTTTAGTAGCTGATG ATATGGCTGCTAACCGCATGCTAGGGGATAGCCAATTCATATGGACATATACTTCACCTGAATTTCCAATGTTTCAGGAA AACCGCTTGCAAAAATTCAAGCTACCTGAACCTGTCCTGTCAATTGGAGGTGTGCTGCTTGTTGAGCTATTGGGAAGAGT TCAAAAACAAGAAATGGATGAATTGTTCTACATATGCATCTCCCATGTTCAAGTTGTGGGGCAGCCGCTTTCACCCGCAT TTGATATTAAAATTCATCACCCATCAGGAAAGTGTACCCTGAAATACTTCCCTCAAACCGATTGGTGTGTGCCTTCAACA TCATCACCGACAATAGAGTCAAACAATCCTTCGCGCCTGCGGTCATTAATGCAGAGTGGTGTTAGACGTTGGGAGCAGAT TATCTTGGGTGCACTGCTTGGTTCTGGATCTGTTGCAGTTGATGATTAA
Protein sequence (LotjaGi2g1v0148900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSEVKNNVDFIQLLEPDMSIKILNHLDDPCDLVRVSIVSSSWHRFVIENGLCKRLCLRMFPEISHVAHSIELGNMIEPVC NVLDNWECLKRNHKVYAFLASGLTPTWKNCISEAISASSTDNYPEESIQNTLEPRDRTENRLLYWSSKGESDPSVPETLG YQLISKLCLVTEIHVQPFQAYFQHGFPIYSAKAVRFRMGHPRYPMELESLVADDMAANRMLGDSQFIWTYTSPEFPMFQE NRLQKFKLPEPVLSIGGVLLVELLGRVQKQEMDELFYICISHVQVVGQPLSPAFDIKIHHPSGKCTLKYFPQTDWCVPST SSPTIESNNPSRLRSLMQSGVRRWEQIILGALLGSGSVAVDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 119 | 119 | 9.2E-10 | – | |
| PANTHER | 5 | 359 | 355 | 1.2E-170 | – | |
| PANTHER | 5 | 359 | 355 | 1.2E-170 | – | |
| SUPERFAMILY | 6 | 71 | 66 | 1.7E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0148900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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