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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0148900 |
| Transcript ID | LotjaGi2g1v0148900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | F-box protein; TAIR: AT4G00755.1 F-box family protein; Swiss-Prot: sp|Q8LG03|FB345_ARATH F-box protein At4g00755; TrEMBL-Plants: tr|I3SPR0|I3SPR0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0148900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:53523921..53530228) extracted from Lotus japonicus Gifu genome v1.2.
TGAGACACACTGCAATTCCAAACACAGCCAATCATTCAGCTGCTTCCATTCCCATTTTCTGACAACCATCCTGAAACAAG GATCCACCCTCTCTTTGCTGAAAGGTAACTCCTTTTCCATCTTTCATATGTTCTCTCTCCATGCCCATGAATTCATGTGC TGCACTTTCTGCGTGAAAGTTTGCAGCTTTTCACTTTTCCCTTATGCCTGCATCAATTACCTTCCCCCTTTAATTTTTGG TTCCTGCTTTTGTCAAACTCACAGTGAAGCAATTTTGTAAAGTTTATATAACTTTTCTCTTAGGCCATCTGTTAATCATG TTTGTGGGTTGCCAAAAGTTTCAATTTTTATGTTCCAGTGCTTAAATTGTAAGAGGATCCTTATTTTTAATGAAGAAAAT AATTTCAATTTATTAATAATATGCAATTCTCATTGTATTCCTCCAAAGTTAATCGATTTATTTATGGTGGAAGTGGTTGC TTGGAGAAACTTTTTCCAAATTGCCATGTGATTTTTTTCAGTTTGTATTATGATATTAGTATTTGTTGCATTGAGCTTCA GCTGGTTTGCTTGCTACCAGGCTCTGACATTTGGAATATGTCTGAAGTGAAAAACAATGTGGATTTCATCCAATTGCTTG AACCTGACATGTCAATAAAGATTCTAAACCATTTGGATGATCCTTGTGACCTTGTTCGTGTTTCTATTGTTTCCAGTTCT TGGCACAGATTTGGTAAGGCTTTTGAGTTTAATTAAGTTGCATTGGTAGAACTTTATGGTGCTTTGGACTTTTAGTCCAA AATGTGTACATTTTCTTTACTTGAAAGCTTGCTTTTTTTTTTTCGGAAAGCTTTTAGGTATGCTAAATTAATTTTGTGTG GTGTGTTGACTTCTAAAAGTTTAACTTCTCTGGTTCAATGTTGTCCTGTAATTTTATTTTTTCTTTTCTGAAATTGGGTA AGCCCTGGTTTCTTCTTCCAAGGTTAAAATGTATGGGAGTAAGTAGCTTATTGTTCATAGGCTTTATTTTTCTATTCAAA TGGTGATAATATGCGCTCTAAATGTTCTGCAGTTATTGAAAATGGCCTTTGCAAGCGACTTTGCTTAAGAATGTTTCCTG AAATATCTCATGTTGCTCATAGCATTGAGCTAGGAAACATGATTGAACCAGTATGTAACGTGCTTGACAATTGGGAGTGT CTTAAGAGAAATCATAAAGTGTACGCATTCCTGGCTTCTGGTCTGACTCCTACTTGGAAAAATTGCATCTCAGAAGCAAT TAGTGCATCCAGCACTGATAACTACCCTGAAGAAAGCATTCAGAATACTTTGGAGCCTAGGGATAGAACTGAAAATAGAT TATTATACTGGTCAAGTAAAGGAGAAAGCGATCCATCTGTTCCTGAGACTTTAGGTTATCAGCTTATTTCCAAACTATGT CTTGTTACAGAAATTCATGTCCAACCATTCCAAGGTTAGCCTGGTAGCTAAGTTGATGAGTTGTGTGCATATCTAGTTAA ACTGAAAAACAAGTAATGTTGAGGATCCCGAGCTTTTACTTAGTCAGCTGACAAATTATCTATGTTTACTTGTCAGCGTA TTTTCAGCATGGCTTCCCTATATATTCAGCTAAGGCTGTCCGGTTCAGAATGGGCCATCCAAGATACCCAATGGAATTAG AGAGTTTAGTAGCTGATGATATGGCTGCTAACCGCATGCTAGGGGATAGCCAATTCATATGGACATATACTTCACCTGAA TTTCCAATGTTTCAGGTGAGTTGCACTATTAGAATTCAGGCTTTACATACTCTTTTTTTACCATTTCAAATAAGTCAACA AAGAGTGAACTTGATATTGATCCACTGTTTTCTTTTCCGGGCATCATCAACTTCTTTAAGTAATTCGCATCCTTGGTTTA ATGGTATTTTTCTATTCTGTCTAAATATTGTTATATAATTTAATGCAATTCGACCATGAAACTTAACCTTTTATGGATTG TGGTTACTGTCTCTGATAGGGCCTAGAAGGTAGTTAGTTAAAATAGTTAAGTGGTTGTGTGGCAGTTGTTAAAATTGTTA CAATTAGGTAGGGACTAGTGTAAATAGTAGGAGAGGGGTGGAATAGAGGCATTTAGACTTGGTATTTTGGATACAGTGAA GTGGCGCTCACTTGTAAATAGGGAACCTTATCTCGTTTTTCTATTGCAATTGAATAAACTTTTGTAGATTTGCTCTCTCT CTCTCTCTCTCTCTCTCTCTAGATTTTCCAGTTGTTTCTCTTGTGGATCATAACAATTTGGAACAACCTGCCTGATCTCA TTTCCGGGGATGACATAACTTAGAATAAAAATTCTATAGAATTCAGTGATGTTCTTGAAGAAGACAACTAGCACGCATGT TCTCTGGATGCTCATGTTGGATGTGAAAGGAAAAGGGCTATGTGGAGGTCATTCGACAATTGCTGGATGGGTAGATGAAG AAACAAGGCATTAGCCTTAGTGGGAATAAGACAATGCACAGACCTCCATGACATGTCAAGTTCACAGCTGGTGAAGGACA ACACTGGGATGCAACAAAATGGTAATTCTCAGTTGAACTTTGATAAGTCCTCAATGTGAGCAAGAAAGTTCAATTACCTA AGTTGGGTCATAGTGACCTGAAGGGATGAATTGATTGGGTGGATAAGTTTTAAGGTGCACGGTGCACCTGATGGAGCTGA TGACAGGTATAAATTGCATTTATATGCATGGAAGGTGTAGCAATGCATTGGTTCTCATTCTTGAAGAGGAAGATGCTGGC CTTGACTTGCTAAGTGTTTACAGCAGTGTTGTTGATAGAACCGGTTCATAATTCACAAGAAAATATTCTGTTTTATTGAC TCAGTAATTCTATTGATTGACTATACTTATCATGTTGGTTCAAAGGTTTTCAGGAAGAAACACGGGCAACATGTAATTGT GTATGAAAGATTGGCCACCTTGTAGCAAACAAGATCTTTAGATGAGTATAATACAAGCTTTTGAAATCATGATGTGACAA GCGTTGGGAGATTCAAGAGGAACAACTGCTGTGGTATTTCTTGGGTGGATTAAGAAGCAATGCGAATCACAGTTCAGATG CATGATCCTAATGATATTAAGAAGGCCATAAATCTGGCCTGAAATATCAGAGGTGCCACACATGCCTCCACATTCCTGTT GAGACCTCAACCCTTGCTATCAAGATGCACTTCAAGTATCATTTGGGCCGAGGAATTTGTCAAGAATGGGACCAGTTGGT ACAGCTACAGTGGATTTAACTAGCCTGCTACAGGGAATCTATCATCAGACTCATTCAAGTGTAATACTGGATCAAACAAT GACTTTGTAAAAGTTGTACAAGGGGAAGTGGAGCAATGATGCACTCCGTCACTAAGCCGAGTGGAAGTATCATGCACCTG TTACAAAGCAAGGGAGCTAGCCCTATCAGGAATATGTTAGGAGAGAAGAGGGTGGATGTTTTTAGTGTAGTCAATGATTT GGTCCCGTGCATAAGAGCTAGAAAATGAAGTGCGATAATAGGCAGAAGATAAACTAGTGGATGAGGAAGGAGAGGTTGTT AATATGGAATCTCTTAGGAAGAAGAACAATAGGAAGGATATGGGCACTAGTGGATGTCATTTCCCCAATTTCAACCTTGT TGATGAGGTTGAACTTTTAAGAGGAGGGTGTTGTGGGGCAAAGAGTTCTTGGTTAGAATAGTGAGTGGTGCTAGAAGTAT AATATAGAATCATTCATGTATCTTCACCAAACAACTTCAATTTTTTGGGATAGTTAGTTCATGAAATAGTATGAGAGCTT CTATGACAAAGTGGTAAAGATTTGGATCTTTATTTATGCCATTATTCTGATAAAAAAAGTTGAGTTTCATGACAAGGTAG GTAAGCTTGTGCATTGTCCATATTTCAAGCCTAATGGGCTCTTGTATGAGGGGGCGTGTTAGAAGTTTAATATAAAATCA TTCATGTTTCTTCAGCTAACAAGTTAAACTTTTAGGAAAGTTGGTTCATGACAAGTGGTGTGGTGGTTAAAGTAGTTAAA GGTAGGGACTTAGCTTAATTAGTAGGAGAGGGGTAGAAGAGGAGTATTCAGATTTGTTAGTTTTGGATAATGGCCCAGTT GTTGTTGAGAAGTCTCACATTGACTAGAGATATGGTCAAAATAGTCTTTATATAGGGTAAGCACAATCCTCAGACCTCAT CCCTGCTTTTAGGGTAGAGTAGGGCCTAACCCAAATTCTAAGATGTATGTGAGTCTATCCTAGATCCGTTTAGTGGAGAA GAGATACCCATATATGGGCCACCTGCAGATGCTCATTCATGCAATTTCCGCACTCCAGATGTTCAACTTTGACTGTGAGG GGGTGTGTTGAGAAGTCCGACATTGCCTAGAGATATGGCCAGAATAGTCTTTATATAAGGTAGAGCAACCCTCACCCCTA AGCTAGCTTTTGAGGTAGAGTCAGGCGTAACCTAAATTCTAAGAGTTGTTAAAGGGTAACCTTGGTTGAAGGGTAAACCC TTTGAAGTAGAGCTCTCTCTCTCTCTCTCTGTTTGGTCTTCGATAAACATTACAGATTTATTCTCTTTCTATTATTTAAA TTTTTCATGTCTTTCTCTTGTGGGTTCATGCCAGTCTCTTAGTAATTTGCAGATCTTCAGCTTTAATTAATTGGCAGTAC GAGCCTATTATGAAACTAATGCGTTAAGGTCCCACGTTGACTAAAGATATAACCAAATAAGTCCTTATAAATAGTAGAAC AATCCTCAACCCTGAGCTAGCTTTTGGGGTAGATTTAGTCAACCAAATTCTAAGATTCTAAGAAATAAGAATTACCACTT AGGATCTTTGTAGTCCTCTTGGGTTGGAGCAACCTCATGCTACCAACTTAAACCTCTTTTTTTATTATAAAATATTTTAT GCATTGTGTGAAGCTTGGAATGTGTTAATCATGTACTAACTACAGGAAAACCGCTTGCAAAAATTCAAGCTACCTGAACC TGTCCTGTCAATTGGAGGTGTGCTGCTTGTTGAGCTATTGGGAAGAGTTCAAAAACAAGAAATGGATGAATTGTTCTACA TATGGTTAGTTTCTCAAAACTTCTCTCTCCCTCCTTCACATTCATACACTGTTGTTTAGCTTAAATACATATTGAAGACC ATTATTATTGAATTGAAATTGTGTTGGTGACACCTGCTCTTCCTTGACCTCTGTCCACTCATGAGTCATGATAAGGTATT GGAAAATGAGGCGGTTTCCCCTGAGAGAAATTTTTTCCATAATATAATAACATTTAAAATTTGTACTCTGATAGGCATCG ACCTCCAATTAGTGAGGTCTATGAGAGGAAGAATAAGAGGAAAGGGCTGGGAGTTAGTGTTCCCTGACTTCTCCAGCAGT ACTAGAGTGTAACTTTAACTAGTAAGTAATTAAGTGGCAAGGTTATATGGTCAGAAACAGTTAGGCAATTTCTGAGTAGA AGGAAGGGAAAGATTTGATTCTCGAAACAGTTAGGCAATTAAGTGGCAAGGTTATATGGTCAGAAACAGTTTCCAACATG AACAAATTTCCTGACTCTTATGTCTAGTGACTTGTCTTGGTTTCCTAATATTAAGTAATTTTTTCTTGTCAGAAAAAAAT ATCATCTATTTGCTTATCTGTTTTCCAACTATGATAAATTGGACTACTGTGGTGCAGCATCTCCCATGTTCAAGTTGTGG GGCAGCCGCTTTCACCCGCATTTGATATTAAAATTCATCACCCATCAGGAAAGTGTACCCTGAAATACTTCCCTCAAACC GATTGGTGTGTGCCTTCAACATCATCACCGACAATAGAGTCAAACAATCCTTCGCGCCTGCGGTCATTAATGCAGAGTGG TGTTAGACGTTGGGAGCAGATTATCTTGGGTGCACTGCTTGGTTCTGGATCTGTTGCAGTTGATGATTAATACAGTGCAG GGAATCAAGTAGCTCAATTCTCAGAAGACATTTTAAAAACTGTGTACTTGTGAGTGAGATTTGGTTGGCAGATAAGATAT CACCTCAAATTTGTGCAAACCTCTGTAGAGTATATGGTCTGCACAGTTGTATCAATTTCTCATTTCTCAAAAATCAATTC TTTAAAGTTTTTCCTCATAATTGATTGACTTTAAAATCAATTGTAAAAGAATTTTCAAAAATGCACTAAGTAGGGGTAGT TAGCATTCCTTCATCTGACATGAAATCTTGACTTCTTGGTAAGTTATCATTGAAGAGATCTCTGTCAA
CDS sequence (LotjaGi2g1v0148900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGAAGTGAAAAACAATGTGGATTTCATCCAATTGCTTGAACCTGACATGTCAATAAAGATTCTAAACCATTTGGA TGATCCTTGTGACCTTGTTCGTGTTTCTATTGTTTCCAGTTCTTGGCACAGATTTGTTATTGAAAATGGCCTTTGCAAGC GACTTTGCTTAAGAATGTTTCCTGAAATATCTCATGTTGCTCATAGCATTGAGCTAGGAAACATGATTGAACCAGTATGT AACGTGCTTGACAATTGGGAGTGTCTTAAGAGAAATCATAAAGTGTACGCATTCCTGGCTTCTGGTCTGACTCCTACTTG GAAAAATTGCATCTCAGAAGCAATTAGTGCATCCAGCACTGATAACTACCCTGAAGAAAGCATTCAGAATACTTTGGAGC CTAGGGATAGAACTGAAAATAGATTATTATACTGGTCAAGTAAAGGAGAAAGCGATCCATCTGTTCCTGAGACTTTAGGT TATCAGCTTATTTCCAAACTATGTCTTGTTACAGAAATTCATGTCCAACCATTCCAAGCGTATTTTCAGCATGGCTTCCC TATATATTCAGCTAAGGCTGTCCGGTTCAGAATGGGCCATCCAAGATACCCAATGGAATTAGAGAGTTTAGTAGCTGATG ATATGGCTGCTAACCGCATGCTAGGGGATAGCCAATTCATATGGACATATACTTCACCTGAATTTCCAATGTTTCAGCTA CCTGAACCTGTCCTGTCAATTGGAGGTGTGCTGCTTGTTGAGCTATTGGGAAGAGTTCAAAAACAAGAAATGGATGAATT GTTCTACATATGCATCTCCCATGTTCAAGTTGTGGGGCAGCCGCTTTCACCCGCATTTGATATTAAAATTCATCACCCAT CAGGAAAGTGTACCCTGAAATACTTCCCTCAAACCGATTGGTGTGTGCCTTCAACATCATCACCGACAATAGAGTCAAAC AATCCTTCGCGCCTGCGGTCATTAATGCAGAGTGGTGTTAGACGTTGGGAGCAGATTATCTTGGGTGCACTGCTTGGTTC TGGATCTGTTGCAGTTGATGATTAA
Protein sequence (LotjaGi2g1v0148900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSEVKNNVDFIQLLEPDMSIKILNHLDDPCDLVRVSIVSSSWHRFVIENGLCKRLCLRMFPEISHVAHSIELGNMIEPVC NVLDNWECLKRNHKVYAFLASGLTPTWKNCISEAISASSTDNYPEESIQNTLEPRDRTENRLLYWSSKGESDPSVPETLG YQLISKLCLVTEIHVQPFQAYFQHGFPIYSAKAVRFRMGHPRYPMELESLVADDMAANRMLGDSQFIWTYTSPEFPMFQL PEPVLSIGGVLLVELLGRVQKQEMDELFYICISHVQVVGQPLSPAFDIKIHHPSGKCTLKYFPQTDWCVPSTSSPTIESN NPSRLRSLMQSGVRRWEQIILGALLGSGSVAVDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 119 | 119 | 8.9E-10 | – | |
| PANTHER | 5 | 351 | 347 | 1.2E-161 | – | |
| PANTHER | 5 | 351 | 347 | 1.2E-161 | – | |
| SUPERFAMILY | 6 | 71 | 66 | 1.96E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0148900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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