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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0159100 |
| Transcript ID | LotjaGi2g1v0159100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cell cycle regulated microtubule associated protein; TAIR: AT4G11990.1 Cell cycle regulated microtubule associated protein; Swiss-Prot: sp|F4I2H7|TPX2_ARATH Protein TPX2; TrEMBL-Plants: tr|K7LE35|K7LE35_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0159100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:56002322..56008710) extracted from Lotus japonicus Gifu genome v1.2.
TAAAAATTAGGTAACATGTGTCTCTAACTTTGGCGCCATATATAGAAACAGACAAACTAACCAAACCTGTTTCTTCTTCT TTCAACTATGCCATTGCCATGTTTTTCTCTTCTTCCCCTCTAATCTATCACCAACGAAATCTTCGCCATTCTCTACGACA GCATTTTCTCTTCTATTCAATTCAATTCAATTATCATTATTACTCCATACCTTCATCATCACTCAAAATTAAATAAAAAA GGAAAATTAATTAAGCAATCAATTAATAAAGTAATTAATATTCCAACTTTCTCTCTCGTTTTCCGGGAAAATTTAACTAC GCCGAATTTTCCCAGAAACGAGAGAGGCGGGTACGGGATCATGGTAGTGAGGCTCTGAAGATAGAGAAGAATTTGAGAGA GAGAGAGCAGCATGGAAGAAGAGTTTGATAAGGTTCAAGTTTCAGACCCGTCTATGTGCGGGGATGATCATAATGAAATT GATCTTGATTATGAATTCGACGCTCCTCGGTTCTTCGATTTCACCCGGCCGGAGACGTTTTGGGATGCTGATGAAGCACA ACAATGGTTCGAATTCGCCGCGAGTTACCCGCCTTCACGTAAGTATATTTGAGGGAAACCAAACCTCCTAGTGATTGTGA TGTTTTTTTTATTGTGTTTGGAAATGGGGTTTTGATTGGTTTGGTTTTTTGATGTGTTGTTGTGTGTAGCGTTTCTGGAG AAGTTGAGATGGGGAAATGCTGGTGCAATGGAAAATGTGAATATTGTTGCTAATGATGATTCTGGTCCTTGTGTGAATCC AGAACAAGGTACAACTTTCACTCCATAGGGTCTGCATTGCTATTCAAATGCCTCATTTTTTGAATGTTGATCAAAATTAT TATGATAAGTATTGCATTATAGTTTCTTTTGATTGATGTTTTGCTATTATTTATCCATTTTCATGGTAGCGTGTGATTGC TCTAATAGCCAAATTTCCCTGCATTGAAATTTGGGCATCCATGGATGAATTTGACATTTTAGATGTCTCTCTATACTTTG AATCTGGACTTACTTTTCATTGATCATTAATCCGAGTTTTGTGTGAATCAAACGTGTTTTATTGAGTTCTCATTGTTTTT TTATTTGTTATCAAATTGCTTTGTAAGTGAATATCCTTTTGTTTCCAGGACTTGAATATTGCAATGCAACAATGCAAGAT ACGTTAAATGGTAACACAAAGCTTCTCAGCAAGTCAAGTTCTTTAAAATCTAAAGTTTTCACTTTCATGAAACCAACAGC AAGTCATTTAGCCAAGCAGAAGAATGCTCCAGAAGTCCAACCCCCTCGATATTTCAGAAGGTCTCAGTTATATCTCACCT CTTGTTTTGCTTCGTGATGGTGGATATTTGGCATCTTATTCAGTGTTATTGTTTGAGATTTTTAAAAAATACATATCATT GGTCATTCACTATGTTGCTATTTTGGATCTTACAATCATTGCTTTGACATTTTATATTATGAATAAACAACAACAAAAGT CTTATTCCACAAAGTGAGATTTGCTATATGGATCACCTGACGCAATTGTGCTCGATCAAAACCAAATTTTCAAGGATATT ATTGACCATGAGGTCGCTTTTAATATCTTCCTACGTCTTCTTATGAATAGTATACTTGACATTACTTTTTTCTTGTGATT AAGTCATTTTTCCTCAGTAACCATGTTTTTATCCATTTCATTCTTTTCAAATCTGATTCTGAATATGTGCATTTGCTTAT TATTTTCCTCCTTTATGTTCCTTACCCATCATTTCTTCTGTCATTCCTAAACTAAGCAGGCTTCAGAAACAGAATTCTTC CATAGATGGAGAATTGACCAAAAGACAGAAGCTTGAAGCTGGTTACTTGCAAAAGGTGTGCTGAAGTTTTCATATATATA TGAACCTTTCGTTCTAATAGTTCTAAATACTTAACTTAGGTGAATTTAATTTTGAATCCTTAATTGTTCATCACATTCTT GTCACTCACTTCTCACATTGCCTGTTAATGCTTTTAGTTTCGTGTTGCAATGTTCATGTGTATCAATTAGGAAAACCAAA CGTTTGGCTTCTTTTATTTTTTACATTGAAGTCTATGTGCTTGTTACATTCGATTTTTCTTAACTATATGCACTTATTTT AATCTGAGTTCTGTTTTTTCTTTTGAAAATGCATGTTTATTGTGAACATTTGATGCAGTTGGTGGATTTTTTTTGGTATT CATGACAGGTTGCTCGTCTTAAGCATCAAACTCTCTTTACACATAAGAAAACCAAGGAGGTAACCAGTTTTTCAGGAAGC ATAGTTCATAATTTGTTTGATATGAAGCTTCAATTATATAGTTTGACAATTATTTTGTTGCACATGAGGAATGTTGGTAC TAACTAGGACTATCTATGTCTAATTTTGAGTTGTTATGTAGGTTGATCGTAAGCCAAACGTTACTATTCCTAGAGAACCT AATTTGGTAACAGCCAGCAGGGCACAAAGACACAAGTAACTACTCATATCATAATATTAATAGCATCATAGTCATTGTTT TATACCTTCTCAGTGAAATACTACATATCCTATGTGATAAATTTTTGAGTGGTGTTGTGCCTGTTGATAGGTCTAGAACT AATGTTGAGTCAGTTAAACATACAAAATCAAGTTCTCGGGTGATTAAAGCACAATCCTTAAGTAAAAAGGTAAGTATTTC TTATACTTCTGCAAGAAATTAAGTACTTAATGACATGATGTAAATGTGTAGTTATTTCATGATCAAATTTTTGGACGTCG CAGGTTTTGGAGGGTCTGGCACAACCCTTTCGCAAGATGAAAACACCACAACCAACAGAATTTCAAGTAATTATCAATTT TTTAAAAGTCATATTGTGTGTCTTTTCTGATTCATTAATTTCTAATGGAATGCATTGAAAACGTGATATATGGAAGACAA CTTAGATTTTTGATTTTCGTACTTATTTTATCTTTGACTTGTACTTTTCAGGTATTCCACTTGAAAACATCAGAGAGGGC ACTGCAGCACGCAGCATCTAGTAATGTTAGTTAATTAAACTTGTGCTTTAGCTGTTGCATATATCCTTTGAGCTTTTTGC TCATGTTTTCAATTCACTGAAGAAAGATGATCAAGTTGTTTATTTTCAAGCAATCACACTTCCCTTATGGAGATGATATT CACAATTGGCAGTAGCTGATACCCTTTTTCCAACTGCAGGCCGGAGGTACATTGAATTGCAATTCTCTCTCAAATAGTGA AACAAAGGATCTCAAAAGGTATAAACATCTAGATTTCTCTTTGATTTTTACATGGTAAAATGTCTCTGGTTTTCTTAAAA AAAAGTGTTGTGGTCAAAGAAGTGACATGGGGTTCATTCTTGCATGTTATTGGAAAATTGTAATTTTGGTCTAATATAGT TCCATTTCTCTCATAGGACAAAATCTAGTGTTGGCTCAAGGCAGGAAAAATGTAAAATGATTAGCAAACTCCGAGGTAGC CTTGATGATAGGGTAAGTAATCATCAGCTAGTGTTCCGAGGTTCTTGCATTATATATGTGCAAAGTTTCTTTCTTTTTCA TTTTTTTTAAAGTTAGTCTTTAATCATGAATATGTTTGTTGTGCTTGATCAGAAACTCTCAAGTAAAAGGGAAAGAGGAG TCTTCAGAAATATCAAAGTATTTCCAGTGGTAATGTATTGAGTGCATGTTTGTTATCCTAAATTAATCATGTTTAAGTAT GTTTCTCATTGTATTTTTTATTTATTTCTTCATAGGAACCAAATGACGAGAGATTTGAAAATGAACTACCAACTGAATTA TTTAGCAAGGTACTAATTAGCTGGAGTTCATTTTTCCATGATGATCTATAATTTTTTTTCTATTTATCTTGGGGCCTACT GTGCAGCTATCCCTGGCTTCTGAAGCCAAAAAAACAACAAAATCACCATCAGTGGAGCAGCCAATTTCTAAGGTTCATCT CTCTTAGCATTCTAATGACAAACAAAGGTTCGGTCTAGTGTTTGCTTCATCTCATTGATTCATGGTTATATTTCTATGAT TCTATTGCAGGGTTTGAAGGAGAATAGACCAGAATCCTTGCGGCAGAAGCATGAGGTATGTTAGGGTACGTTTGCTTTTA CATTCACTTTCAACTCAACGGAACATATCTCTATGTCTCATTTCATGTTTCAAGTTTTGGAAAATGTGATTTGGTTTTCA ATATATGTAAACCGAAGCCAAATTTCAATCCAAACAAACTCAATGTGTGTTTGGATACCAATTAATGTGAGTTTGGATAC AAGTTGAGTGCAACGTGAATGTATGTTTGCACTGGTCCAACACATATCCAAATAGCCTTGGTAGTAAAAGTAAATTAATT GAGTGTCCAACACATATCAAAATAGTTATTTCTTTAAGCTCTGTCATGAAAAAAATATTTTATTTCACAGAATATGCTAA TCCAAATGCACATTAAGTTTTGTTGTATGCAAGCCTCATTTTTCTTTGTCAACATTTAATTTCTAGAAGATGAATTTGAT CAGAGAAGAAATTCAGAGACTATGCACGAAGCAGTATCAATGTGAGTGAAATGGGCTCTCTCATGCCAAACCAAACCTGT ATGCTGGCAAGTAGAACAAAATCTAAATATAATTTCTTTCTAGTTTATATATAGTACTATAGTAGCATCATTTGGCTACT TAAATATGTTAATTGTGAAAAAAAACTCATGTTTTTGACACAGGAACTTGGACATTAGCTGAAAACAAGTGGTGGTTCTT CTGATTGGTATTCATTAGTCTAGATACATTTTGCTTAAAATTCTATAAAAAAATCCCCTCAATAATTGGATACTCAACTG TAAGTTATATTGGAAACCATCCCAAAGGGTTCTTGGGAAATGATTCTAAAGCAAAAAGATTATTTAGGGAAGAATTTCTA AGATGGAACCTAATACCTTCATTGCACAACAAAGCTTCAGACTCTTGGAATTTCTTCCTCTTTTCCTTTTCTATCAAGCT GTGTATAAAGAATGGTACCAAATGTAATATCAATGTGGTCAAGTTTGAGGAATAAAAATACTAGTAAATTGCTGCTGGCT TTACTACTGTTTGTAACTCAAGCATTTGAGGTCTTTGCACCATTGGCTGAAGTTGATGGTGTGTTAGACAATATGAAGGT AATATGGTACTGGTAACTGGTAAGTGTCTATTTGTATTCTGTTTTTTCTTCCCATTACCTGTTTCACTAAAATAACATGT ATTTCCATTTTGTTTTCTATTTTCAAAGTTCTTTATTTTTATTTTATTTTTTTTTGAAAAGTTCAAAGTTCTTTATTAAA AACAGTGAAATCAGTTCTTTGCTACACTAGTTTTTGAAGGCAGAAAGTAATATTAAAGTGGGTTGATATTTTTGGTGCCC ACTAGGGTGGACACTTTTAATTTTGGTCCACCGGTGCACCAAAGGTTATATCAGTAATTTACTGTCAATGAAAAAATCAA ATCCTAAAATAAACCTGGTCCACTGACCCGTAGCCATTACCGTGCAAACAATGAGATTATTCACAGCAGCACCATCATCT CATTACAGGAGCCATTAGCCAAAAAAAAAATCACTACACATTGATTTTTGCAATTGGAAGAGGGCTTTTTGGTTTAGTGT TGATGTATCAAATTGTTGTTGCTTAAGGGGAATGCCAGATGTGTTGCCGGTGCTCTTGCTAAGACCTCTGATTCACCATC GGGTTTTTTTTCTCTTTCCTTCTTTGAGTTTGAGTATGAACTTGTGAGCTGAAAAACAGAGCAATGGTTATGGGGAGATG CAGATTTGGTTGTGGTATGGCGAGAATGGAGGGAAGAAGATTCAGATCTATGACCCTCTCGTTGTTCACAACAGAGGACG AATTGGAGTCGCTCTAGGCTCGGAGTTTCTATGTGCTCCGCCTTGCCTCACGATGGGAGCAGGACCAGGAACGAAGGCAT CAAAGATCACCACCGGAGGCCGGAGGGCACCATTAGCATCCGCAGCAACGGCGGAGAGAGAGAAGTGCAGGCCGGAACAT TTTCCAGAAGCAAGGAGAAGAAGATGGGGACTAGGCTGGAGCATTTTACAATTTTGCCCTTTTATTATTCATCTAATCCT AACTACTCAATTAAAGTATATTTTAAGATGCTTTGATCTAACGGTGTTGATACTTGGTGCACCCGGTGGACCAAAATTAA AAGTGTCCACCCCAGTGGGCACCGATATTTTTATGGTGAAAAATTAAAACAAGAATTCAAAATATAAATAAAATAAGTGC ATTACTTTTGGTGTCACCCCAATTGATTTTCATGTCATTTCTTTTTTTGCACTTTACTAAAATACCCCT
CDS sequence (LotjaGi2g1v0159100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAAGAGTTTGATAAGGTTCAAGTTTCAGACCCGTCTATGTGCGGGGATGATCATAATGAAATTGATCTTGATTA TGAATTCGACGCTCCTCGGTTCTTCGATTTCACCCGGCCGGAGACGTTTTGGGATGCTGATGAAGCACAACAATGGTTCG AATTCGCCGCGAGTTACCCGCCTTCACCGTTTCTGGAGAAGTTGAGATGGGGAAATGCTGGTGCAATGGAAAATGTGAAT ATTGTTGCTAATGATGATTCTGGTCCTTGTGTGAATCCAGAACAAGGACTTGAATATTGCAATGCAACAATGCAAGATAC GTTAAATGGTAACACAAAGCTTCTCAGCAAGTCAAGTTCTTTAAAATCTAAAGTTTTCACTTTCATGAAACCAACAGCAA GTCATTTAGCCAAGCAGAAGAATGCTCCAGAAGTCCAACCCCCTCGATATTTCAGAAGGCTTCAGAAACAGAATTCTTCC ATAGATGGAGAATTGACCAAAAGACAGAAGCTTGAAGCTGGTTACTTGCAAAAGGTTGCTCGTCTTAAGCATCAAACTCT CTTTACACATAAGAAAACCAAGGAGGTTGATCGTAAGCCAAACGTTACTATTCCTAGAGAACCTAATTTGGTAACAGCCA GCAGGGCACAAAGACACAAGTCTAGAACTAATGTTGAGTCAGTTAAACATACAAAATCAAGTTCTCGGGTGATTAAAGCA CAATCCTTAAGTAAAAAGGTTTTGGAGGGTCTGGCACAACCCTTTCGCAAGATGAAAACACCACAACCAACAGAATTTCA AGTATTCCACTTGAAAACATCAGAGAGGGCACTGCAGCACGCAGCATCTAGTAATGCCGGAGGTACATTGAATTGCAATT CTCTCTCAAATAGTGAAACAAAGGATCTCAAAAGGACAAAATCTAGTGTTGGCTCAAGGCAGGAAAAATGTAAAATGATT AGCAAACTCCGAGGTAGCCTTGATGATAGGAAACTCTCAAGTAAAAGGGAAAGAGGAGTCTTCAGAAATATCAAAGTATT TCCAGTGGAACCAAATGACGAGAGATTTGAAAATGAACTACCAACTGAATTATTTAGCAAGCTATCCCTGGCTTCTGAAG CCAAAAAAACAACAAAATCACCATCAGTGGAGCAGCCAATTTCTAAGGGTTTGAAGGAGAATAGACCAGAATCCTTGCGG CAGAAGCATGAGAAGATGAATTTGATCAGAGAAGAAATTCAGAGACTATGCACGAAGCAGTATCAATGTGAGTGA
Protein sequence (LotjaGi2g1v0159100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEEFDKVQVSDPSMCGDDHNEIDLDYEFDAPRFFDFTRPETFWDADEAQQWFEFAASYPPSPFLEKLRWGNAGAMENVN IVANDDSGPCVNPEQGLEYCNATMQDTLNGNTKLLSKSSSLKSKVFTFMKPTASHLAKQKNAPEVQPPRYFRRLQKQNSS IDGELTKRQKLEAGYLQKVARLKHQTLFTHKKTKEVDRKPNVTIPREPNLVTASRAQRHKSRTNVESVKHTKSSSRVIKA QSLSKKVLEGLAQPFRKMKTPQPTEFQVFHLKTSERALQHAASSNAGGTLNCNSLSNSETKDLKRTKSSVGSRQEKCKMI SKLRGSLDDRKLSSKRERGVFRNIKVFPVEPNDERFENELPTELFSKLSLASEAKKTTKSPSVEQPISKGLKENRPESLR QKHEKMNLIREEIQRLCTKQYQCE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 403 | 403 | 4.3E-167 | ||
| PANTHER | 1 | 403 | 403 | 4.3E-167 | – | |
| Pfam | 201 | 353 | 153 | 2.8E-22 | ||
| MobiDBLite | 211 | 238 | 28 | - | – | |
| MobiDBLite | 219 | 233 | 15 | - | – | |
| MobiDBLite | 282 | 299 | 18 | - | – | |
| MobiDBLite | 282 | 316 | 35 | - | – | |
| MobiDBLite | 300 | 316 | 17 | - | – | |
| MobiDBLite | 373 | 387 | 15 | - | – | |
| MobiDBLite | 373 | 402 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Spindle | The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart. | ||
| Cellular component | Microtubule | Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle. | ||
| Biological process | Activation of protein kinase activity | Any process that initiates the activity of an inactive protein kinase. | ||
| Biological process | Regulation of mitotic spindle organization | Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle. |
Expression pattern of LotjaGi2g1v0159100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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