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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0169700 |
| Transcript ID | LotjaGi2g1v0169700.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant/F9H3-4 protein; TAIR: AT1G17830.1 hypothetical protein (DUF789); Swiss-Prot: sp|A0Q2Z6|ATPA_CLONN ATP synthase subunit alpha; TrEMBL-Plants: tr|A0A1J7HSA3|A0A1J7HSA3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0169700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:58466453..58469484) extracted from Lotus japonicus Gifu genome v1.2.
TAACCTTTTATTGAGAAAAATGTTTCCAATGGGATTTCCCAGTTGCTTAAGCTACTCACTACAATGTTATTATGTGGCTC TTTTTCCCTCAATTTTTGTTGTTTTAGAGAATCAGTCAATGTTTTTGGTTATTCAAAGGGCAGGTGGAGGGTGCTATTTC ATGTTTTGGCCCATGACTTTATTGGCTCTTGCTACTATTTTTAGTATTTCTTGCTCTTGATTCTTAAAAACAGGGTTGGG GAGTCAAGGGTCTGTTTGGTGTGTTCTTTGAATCCACTCTTAGTTTCTTGCAAGTAACCTCTTTTGCAATATTGACACAA TTTTGGTACTGTCTCATTTCTTACATAGGTCACATTGCATTATTGATTCCCTTATAATAAACTATTTTGTTTCTAGTCAG ATAAAGAATGGAAGTGAAGTTCTAAGTTCTGTCTGTGCTGTCTGTGATTAATATGCTTCTTTTTCCTGTTTTCAATTAAA GTTTAGATATATTGGTCTGTCATTGAACATGATTCATGATGAACATTATGATGTTATATGATATATTTAGCCGACCCTAA CTAGTGAGAAGAAGCTATGGTAGTTGATTTTGTAAATGTTAGAATATAGAAGTATCACGCTATTCATAGCATGTTTGGAT CAACTTTTTTTCCCTCAGAATCAATTTTGAGATTTTTCTCCCCAGAATAGATTCTGGCTTTAAAATCATTTGTAAGATCA TTCTATTAGATGGCAGAAAAAGACCATGGACCTTCTAATTTCTTTCCCTAATTTCTTTGCTGACATTATGTGATTTGCAG AGCTGCTTGAATGATGTAAATCGCCTCTGGCAACCTCTTGGCAAGGAGAAAATTGAATATTTCACCTTGAAAGATCTCTG GGACTGTTTCAATGAATGGAGTGCGTATGGTGTCGGTACGCCTGTGACTCTAGAGAGTGGTGATACTGTGATTAACTACT ATGTTCCGTATCTATCTGCTATCCAATTGTACACCAATAAGTCTGTGGCAGCTTCACAGTATGTAGAACAATGCCTTATT GTTATTATATACCAAATGTGTCAACAAAATGGTGTGCAAACCCATCTTCTTTTCTCTTTTCTAGGAATCAGAGAGAGGAT GGTGATGGAGTTGAATTTGAAAGCGATTCATGGAGCGATGATAGTGGAAGTGATGACCTCTCTAGGTCACTGAGTAACAA TTCCAGCAAAACTTGGGATGCTGTTTCTAACGACTCAAGCTCTGACCAGGATGGTTCATCACCAACAAAGGATCAGCTAG GCCACCTCTACTTACAGTATACTGAGACGGCTGCGCCCTACGCGAGAGTTCCGCTTATGGAGAAGGTATCCTTTCATTGT CAATATGTTAAGTAGTATTAACTTTATACCACCTCATTTCAGTGACAATATAGATGGACTTACTTGTTTCAGATATCTGA GTTAGCTAGAAGCCACCCGGCCATAATGACATTGAAAAGTGTAGACCTTTCCCCTGCAAGTTGGATGGCAGTTTATTGGT GAGCATAGTTTTTTAGCTCTTCTTATATGCATGCTTTTTGAAGGATATGTGAACTCTCCTTGTTACATGCGAACTTTGTT TGTAATTGTCACTGAAACCGTTTTATTTCTCAATTTTAATTGAAGATTTGTGTTTGTGTTTTCATAGACAAGATATAAAC TGACAATGGGTGAAGAGTTTTCTAGAGCTCAACAATTAGTTCTCTATATAAGAATATTCTTATTAATTTTTTATTTGTAA TTCTATGTTACTTTCTGTAAGACGCCTAGTCTCTCTTGGTAGAAAGATGTTATACATACTGACTCTTCATCATTGAATAG GTATCCGATTTATACTATCCCGGGTCGTAAGAATGTCAAGGACATGGAAGCATGTTTTCTCACTTACCATACTCTGTCAT CGTCATTCCAAGGTATCTTAATGCAGTTCTTTACCAATCAATGATGTCTTTTTGATGTGAAAGAGAAAAAACAGATCAAA TCATTTGTATGTCTTGCTATTGTTTAGGAGGGGGCAATTATGATTGAAATTTATACTACTTAGTCATAGAGGTTCTGATA TTATATTATGAACCAGCTATCCCAGAGCTTAAACTGTTAGGTGAAACACATGTTTTAGCACATATAAGCTTTTACTATCA AAGTAGTATGTTGAATAATAATTTTGATTCATTATATGGTAACTACTTTTAGTTCTATAGTGGTGCTAAATGTGCACTAC ACTAAAGGTTCTTGGCGGTGGTTTAGTTCACACAATCTGCTATATCATTCCTGCTGAAAAGTGAGAACTTCATGTTATTT TTTGTTCTGTTTGTCTACAGATTGTGGAACGGAGTCTGACGACATTGACATGGACAAGGAGAAAGAATTATGTTGTTTCA GTGAGTGGGGAAGCATTCTGGAAGAGCAATGCAAGAAAAGGGACAGTGACTGCATATCTCTGTCTCCTTTTGGACTAGCT ACTCACAAGTTGCAGGAAGATGTTTGGTTAAACCCAGAGCCATATGATAAGGATATGGTTACCTATCTCTACAGTGCAGC AGATTCATGGCTAAAACAGCTCAATGTCAATGATCACCATGATTTCAACTTTTTCACATCAAACCTTACCTTGTAAAGTG GTTTCTCTTCATCCTTACCTGACTGCTATCATGTTTGGTTCCATGCTAGAATGTTTTAGAATCGATTCTGGTAGGAAGCT ACAAGACTTGGCTTTGGCTTCTGTGCAAACCGTGAAACTAAACCCTTTGTTTAGCTTTGAACTGACACCGGCCATAAAAG AAATCCCCCTGGGTGCAATTCTGAAAACATTCAGAATCTGAGGTTATCTCATAAGAGTATAACCCTTGAGCATTGTAAAT TTTTGTTAATGGGTAGGGGGTGAGTTTTTAACCATAGTTTTGGTTTTTCATGCTGTTATCCTAGAAAGAGGGTAATTGTT TGTTCTAGGTAACTGAAACTTATGATGCATGTCTTGTACTTTAGTCCTTTTTTAGTTTTCAAAAGATCTTCT
CDS sequence (LotjaGi2g1v0169700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAAGATATCTGAGTTAGCTAGAAGCCACCCGGCCATAATGACATTGAAAAGTGTAGACCTTTCCCCTGCAAGTTG GATGGCAGTTTATTGGTATCCGATTTATACTATCCCGGGTCGTAAGAATGTCAAGGACATGGAAGCATGTTTTCTCACTT ACCATACTCTGTCATCGTCATTCCAAGATTGTGGAACGGAGTCTGACGACATTGACATGGACAAGGAGAAAGAATTATGT TGTTTCAGTGAGTGGGGAAGCATTCTGGAAGAGCAATGCAAGAAAAGGGACAGTGACTGCATATCTCTGTCTCCTTTTGG ACTAGCTACTCACAAGTTGCAGGAAGATGTTTGGTTAAACCCAGAGCCATATGATAAGGATATGGTTACCTATCTCTACA GTGCAGCAGATTCATGGCTAAAACAGCTCAATGTCAATGATCACCATGATTTCAACTTTTTCACATCAAACCTTACCTTG TAA
Protein sequence (LotjaGi2g1v0169700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKISELARSHPAIMTLKSVDLSPASWMAVYWYPIYTIPGRKNVKDMEACFLTYHTLSSSFQDCGTESDDIDMDKEKELC CFSEWGSILEEQCKKRDSDCISLSPFGLATHKLQEDVWLNPEPYDKDMVTYLYSAADSWLKQLNVNDHHDFNFFTSNLTL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 157 | 157 | 1.3E-63 | – | |
| PANTHER | 1 | 157 | 157 | 1.3E-63 | – | |
| Pfam | 1 | 154 | 154 | 2.0E-52 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0169700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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