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LotjaGi2g1v0174300.1

Overview

Field Value
Gene ID LotjaGi2g1v0174300
Transcript ID LotjaGi2g1v0174300.1
Lotus japonicus genome version Gifu v1.2
Description Carboxyl methyltransferase; TAIR: AT3G11480.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9SPV4|SAMT_CLABR Salicylate carboxymethyltransferase; TrEMBL-Plants: tr|B7FIK3|B7FIK3_MEDTR Salicylic acid carboxyl methyltransferase; Found in the gene: LotjaGi2g1v0174300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:59216799..59221495) extracted from Lotus japonicus Gifu genome v1.2.

TCGATCTATCCCTATATATATAAGAGGTCGGAGTGATGTGGGTTTGAGAACATATTAGAAGCATAGAAATTAGAAATCAA CTGTAGAGAAAGAGTTAAATGGAGAAAAGAGAAACAAGAAGAAAGGATGTGGCACAAAAACTACTGCACATGAAAGGAGG CACTGGAGAAACAAGCTATGCCAAAAACTCCTTAGTTCAGGTACAAATCAAGTGCATTCGTTTTGTTTTTTTTTTTCACT TTCAAATTAATTTTTTTTGACAGACAAATTAAAAAATTATTTTAACAAATTTTTATGTGTTTATTTAAGTTTGTTAGAAA ATTATTTTTTAAAAATATAAAATCATATTATTTAAAAATCTACTTTTTTATACTAAGAAAAACTATTTTAATTAGCTTAT ACAAAAACTATTAGGTAAAACAATTCTAATCCCGCGTAAGCAAACACAAAAAGAATTTTTTTTACACAGTTAAAAATTAT TTTATTTTAATTTAAACCTGAAACAAATCACAATTTATTATTTAGTAATTCTAATCGGGCTTTTTTTTTGGGAGGGGGCT TAATTTTTTGCAGGAGGTGATCCCCTGCACTGCACTTGCATAGTTGCATGTCCCTAGCTTATAAGATCTAATTTCAACTT GAGCTATTCTTTATGATAGCAGGTTAATATCATAAAAAATTTCTTCTTTGCATTAATTGCACACTCATATAATATTTACC GAATGTAACAAAAAAAAAATTAATATTTACCGAAAATTTATAATTAGCAAGGTTTGAATTTTAGATTGATTAGTTAAAAA AATAAAATTAGATTGATTAATACTAGTAAAACCACATTTTTTATTTATATATTTATTTTTTAATTTATTGTTGTTGTTCT GAATGAATGGTGTATTATATTCAGCAAAAGGCGATTTCTTTGACAAAGGCAATGAGAGAGGAAGCCATAACCAACCTCTA CAGCAAGAAATTCCCAAGAGTCTTATCAATTGCAGACATGGGTTGCTCTACTGGACCAAACACCTTCATGGTGATATCTG AAGTTATCAAATCGGTGGAGAATATTTGCCGAGAAATGAAGCATGAGTCTCCTGAATACCAGTTCTTCATGAATGATCTC CCTGATAATGATTTCAACAACATCTTTAAGTCCCTTGACAACTTCAAAAAGAAGCTAAGTGATGAAATGGAAGATGTTGA AATTGGTCCATGTTTTTTCTTTGGGGTTCCAGGCTCCTTTTATGGCAGGGTCTTCCCCACAAAAACTTTGCATTTCGTCC ATTCCTCTTATAGCGTCCATTGGCTATCCCGGGTACATAATTACTTCCTTCGTTTCAAAATGATTGTTCATTTAGAGAAT ATTCTTTGTTTTATAACTGCCCACTTAAAATTTGAATAAAACATTAATTAATGTTTTTCCATATAATGCGGCCCCCAAAA GAAAAATAAATAATACATTTTAAAAAATTAATTATATTTCTTAATATATGTTTTTTTTTCTAGACAGTTAGTTTGAAACT AAGATAATATCATTTTTTCTATTTAATATAAATCATATTTAAATAAGAATATTTTAATCAAATTATTTATTAATTAATAA ATTTGAAAATGTATATATAACCTTAAACAACAACTGTTTTGAATGGGGGAGTATTATGATTTGATTAATTCAATATTCAA ACTATACTACCACTCATCATGTTTATAAGAACAAATAAGAGGCTTAGTTTGATCATTTTTATAATTTATAATGAGTTCAA TAACTAACTTAAAATTTGAGGTGCATTAATTACTTTTGATAAGAACACACTTATTTAATTGAACTTACTCTCCATTTTCA CTATGCTAAGTATTGATGATGCATTGAAATTTAGAAAAGTGAGTTAAGGGCGATTTTAGAAATTCAATAAAAATTGAAAA TAAATTTAATGTATTTAACTACTTTAACTATATTTCTTAAACTATATAAATTAATTTTTTGTTTCTTTATTAGTTATTAC CTTTTTCTCTTTGATTTGCCAGGAGGGCTAAAATTATTACAGATTAAAAAATGGAAATAATTGTTTATTGGTAATTAATT AGGTTCCTCAAGGTATAGAGAATAATAAGGGCAACATTTGCGAGGCTCGCACAAGCCCCTTGAAAGTCCGCAAGGCTTAC TACAAGCAATTTCAGAAAGATTTCTCATTGTTTCTTAAGTCTCGTGCAGAAGAGCTCATTGAAGGAGGTCGTATGGTTTT AATACTTATGGGAAGAAGAGGTGAAGAGCAATATAACAAAGATGGTTGTTATATTTGGGAGCTTCTGGCTTTGGCTCTTA ATGACATGGTCTCACAGGTATGTGCACACATGTACATATCTATATATATATATGTAAAGCACACGTGTGTTTTTTGCATG CAATAAATGCATTAAATCATAAAAGCTCACATATTTTTATATTAAATACATTAAAAAATAAATAATTTAATAAATTAAAA ACTGAAAAAATTTGTATTATTAAAAACTATTCAACTACTTATATTAAATAACAACATTCATAGACTTAAAATTGACTTGA GCTTTGCATTTAAAAAATTTAAAATATCAAAATTTTAAAAAAATTTATTTATTAATAATTAATTTAGATTAACCACTTTT AAAATAAAAAAAATTCTATATATATATATATACATATGTAAAGCAGACTTGAAAAAATAACATTAAACACATAAAAAATA GTAAATTTATTTTGAATTAAAAACATTAAATAAAAAAATTGAAAACTAAAATAAAAACTACATCAACTTTATTATTCATT ATATTAATTATTAATTGTTAAACATTTCAATTTCTCATATTTAAAAGTAAATATTAAAATTTAAAACTTTTCAATTTCTC TTATTTAAAATGAAATATTCAAATTATTTAAATTTTAATTATTCATTACAACTTGAGGTGAATTTTTAAAAAATAATAAT AATTGAAATTGACTACCTTACATTAATGACAATAATAGATTGTTAATAATAATTTGTTTATATTCTTTACATTATTGTTA ATAATAATTATAAATCTTATTAGTTATTAATCATAAGTTGAGAAATTTTTAAAAAATAAAAACTAAAACTTATTACTATT TATTACTTATAAAAAATATTTATTAATAATTAATATCAAAAAAATAGTTGAAAATTAAAAAACAATGTCTCTATAAGATA TTATTATTACTATATCGAATGTGTATATTATTTGAAAAAAAATTAATATGATTTTTGATCTATTATGTAGAAGTAAAAAT AACTTGAGGAAGCATAACAGAGAAAAATAATTATTTTATTTCAAGTTATAAAAAGTTATTTCAATTATAATTTTTAAGTT AAAATAATTTCAAGTTCAAAAAAAAGTTAAAATTATTTTATTGTTGATAAAAAAGTATAAAAAAAATATGTTATTATAAC TTATATTAAAAATTTATTACTTGATTTAAAATATTTTAAATTCACTGAAGGATTTTTCAAATTATTAAATTGGTTTTTAA AGATTAGTTATGATTGAAAAATAGAATAACATATGGGGACAATAATTGAGTATCAATGTTTACAACCGGATATATGATAA ATCAGCACCTCTGCAATTGAAACCACAATAATAAACCTAAAAACAGAGAACCCAACAACCAAAGTTTTTAAAATTAATTT AATACTAATACAAAAGAAATTTAATTACACTGTAATAATTTGTATATTATATTAAAAAAAGTAATGTAAATAAACCTATT TCTAGTGAGAGCGTATTAGGTGATAGTAAGAGTTTTTACTGTGAGAGATGAGAGCATTAATTTCTGATCATACAAAGCTA TTTAATGGTCACATGACTTTTTTTTAAAGAAATAATGTGATTTAATGTTTTAATCTTAACCATCACATTAAATCGAATGA TTGGAATTCAATGTTTTTTTCTCTCACCATAAAAAATACTCTCACATGATATGACCCTATGTATATACCAATTTCCGACT TAACTGAAATTTGAAATTTAATCATTGTGATAATTATATTCTAGAATTTAATGGGCTAGCTTTGCTAAAAGACAATGGTA CGGGAAGATTTCATTGGATATTGCTTGACAAAAAGTTATAAAATGTTTTGCTAGCTCAATGCCTCAATCAATGTTTGCCC AGGGAATAATAAATGAAGAGCAAATAGACACTTTCAACGTCCCTATGTACACCCCATCCCCATCTGAAGTGAGACTAGAG GTTCTCAAAGAAGGTTCATTCACCATCAATTGTGTGGAGGTGTCTGAAGTACATTGGAATGTTGCTCATGATCATGATGA TGATGACTGGAATAACAATAATGCTAATTTCGATTCCAAATCTGAATCTCTTATAAAGTGCATGAGGGCTGTGGCGGAAC CTTTGTTGATCACTCACTTCGGAGAAGTTGTTATTGAAGAGATTTTTCGTCGGTATCAAGCAATCCTTGCTGATCGAATG TCTAAGGAGAAAACTGAATTCGTCAATGTTAATATATCAATGACCAAAAAAGAATAATATTATTGAGCCACAAGTTGTTT GAATATTATGGTTGATTTCTCAAAGAATGAATGAAATAAGAAAAGAAAAACAAACATCTATGTCGCAGAATCAATGTAAT TAATTGTCGGCCGAGTTTTTTTCTTGTCAAAATTCTATATCCAATCCATTAAATTCA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0174300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGAAAAGAGAAACAAGAAGAAAGGATGTGGCACAAAAACTACTGCACATGAAAGGAGGCACTGGAGAAACAAGCTA TGCCAAAAACTCCTTAGTTCAGCAAAAGGCGATTTCTTTGACAAAGGCAATGAGAGAGGAAGCCATAACCAACCTCTACA GCAAGAAATTCCCAAGAGTCTTATCAATTGCAGACATGGGTTGCTCTACTGGACCAAACACCTTCATGGTGATATCTGAA GTTATCAAATCGGTGGAGAATATTTGCCGAGAAATGAAGCATGAGTCTCCTGAATACCAGTTCTTCATGAATGATCTCCC TGATAATGATTTCAACAACATCTTTAAGTCCCTTGACAACTTCAAAAAGAAGCTAAGTGATGAAATGGAAGATGTTGAAA TTGGTCCATGTTTTTTCTTTGGGGTTCCAGGCTCCTTTTATGGCAGGGTCTTCCCCACAAAAACTTTGCATTTCGTCCAT TCCTCTTATAGCGTCCATTGGCTATCCCGGGTTCCTCAAGGTATAGAGAATAATAAGGGCAACATTTGCGAGGCTCGCAC AAGCCCCTTGAAAGTCCGCAAGGCTTACTACAAGCAATTTCAGAAAGATTTCTCATTGTTTCTTAAGTCTCGTGCAGAAG AGCTCATTGAAGGAGGTCGTATGGTTTTAATACTTATGGGAAGAAGAGGTGAAGAGCAATATAACAAAGATGGTTGTTAT ATTTGGGAGCTTCTGGCTTTGGCTCTTAATGACATGGTCTCACAGGGAATAATAAATGAAGAGCAAATAGACACTTTCAA CGTCCCTATGTACACCCCATCCCCATCTGAAGTGAGACTAGAGGTTCTCAAAGAAGGTTCATTCACCATCAATTGTGTGG AGGTGTCTGAAGTACATTGGAATGTTGCTCATGATCATGATGATGATGACTGGAATAACAATAATGCTAATTTCGATTCC AAATCTGAATCTCTTATAAAGTGCATGAGGGCTGTGGCGGAACCTTTGTTGATCACTCACTTCGGAGAAGTTGTTATTGA AGAGATTTTTCGTCGGTATCAAGCAATCCTTGCTGATCGAATGTCTAAGGAGAAAACTGAATTCGTCAATGTTAATATAT CAATGACCAAAAAAGAATAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0174300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEKRETRRKDVAQKLLHMKGGTGETSYAKNSLVQQKAISLTKAMREEAITNLYSKKFPRVLSIADMGCSTGPNTFMVISE VIKSVENICREMKHESPEYQFFMNDLPDNDFNNIFKSLDNFKKKLSDEMEDVEIGPCFFFGVPGSFYGRVFPTKTLHFVH SSYSVHWLSRVPQGIENNKGNICEARTSPLKVRKAYYKQFQKDFSLFLKSRAEELIEGGRMVLILMGRRGEEQYNKDGCY IWELLALALNDMVSQGIINEEQIDTFNVPMYTPSPSEVRLEVLKEGSFTINCVEVSEVHWNVAHDHDDDDWNNNNANFDS KSESLIKCMRAVAEPLLITHFGEVVIEEIFRRYQAILADRMSKEKTEFVNVNISMTKKE
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31009:SF84
13 378 366 1.6E-170 –
PANTHER
PTHR31009
13 378 366 1.6E-170
IPR005299
SUPERFAMILY
SSF53335
14 378 365 1.33E-127
IPR029063
Gene3D
G3DSA:1.10.1200.270
16 362 347 1.2E-136
IPR042086
Gene3D
G3DSA:3.40.50.150
30 299 270 1.2E-136 –
Pfam
PF03492
47 377 331 3.0E-120
IPR005299

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008168
Molecular function Methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0174300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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