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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0187300 |
| Transcript ID | LotjaGi2g1v0187300.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Reductase 1; TAIR: AT1G59960.1 NAD(P)-linked oxidoreductase superfamily protein; Swiss-Prot: sp|E7C196|MER_ERYCB Methylecgonone reductase; TrEMBL-Plants: tr|I1MQN4|I1MQN4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0187300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:61554957..61557303) extracted from Lotus japonicus Gifu genome v1.2.
GTCTATTCATTCAAACTTGATGCTTCTCAACTTCTTTCCGAGGCATAGCCACCATCCATCTCTTATCTTGGTAACTTCAT TGAAACTCTTCTCTTCTATATATTGTAATCACAACACATTCTACACAAACCAAACCAAACCGCGATGAAGCTCTTCTTAT CTTGGTAACTGCATTAGAAACGCTTCTTATCGTGGTAACTGCATTAGAAACTCTTCTCTTCTATATATTGTAATCACAAC ACAATCTACACAAACTCTTCTCTTCCATTAGAGACTATGGAAGCGAAGAAAATCCCAAAGGTGTTGCTAAACTCAGGGCA AAAGATGCCACTGGTTGGCATGGGAACTGCAGCAATGCCTCTCCCACCACATGAAGCTCTCACCTCTGTCTTGATTGATG CCTTTGAAGTAGGATACAGACACTTTGACACTGCAGCTCTGTATGGAAGTGAGGAGCCTCTAGGCAAAGCTGTCGCAAAA GCTTTAGAGCTCGGCCTCATCAAGAGCCGCGATGAAGTATTCATCACTTCTAAACTATGGGGCACAGATGCACATCATGA TCTTGTTCTTCCAGCTCTCAAGACCACACTGAAGTAAGTACAATCCTCAACCCCACTTTGTTTCGAATTCGATTTCCATG CAGTCAAAGATATCCTACATTCACACATTGGAGGGATCCGAACGGTTTGATTAAGATCGGTAGGTTCGTACATTTTATAC TTTATGATTGGATGGTAGATATAAATTTAAAAAATGTGCCGATTAATCTTTAATGAAACGGCTCGGATTGCATGACTACG AGAATTTAGGAAATCTCTGACGGAAGAGAATCCAAATTCATCTGTTTCTCCTTTGTATCCCTCTGATTGGTTATATTCTA ATAGCATGTTGGGATCAGCTTCTCTTTTCTCATAATCAATTTTGAAACTAAGAAGTTACTTTCAAAAGCTTCTACCCCAG AATTGATTGACATGCACTAAGTATCCTTGAAATTGTTTAGGAAGCTGGGGCTGGAGTATGTAGATCTCTATTTGATTCAT TGGCCAGTGAGGTTGAGGCCTGAAACTCAAGGGATTAATGTAACAGAGGATGATGTGATTCCCTTTGACATGAAAGGAAC ATGGGAAGCTATGGAAGAGTGCTCCAGATTGGGGTTAGCCAAATCCATTGGTGTCAGCAACTTTGGCATCAAAAAGCTAA ACCAGCTCTTAGAAAATGCCACCATCCCTCCTGCTGTCAATCAGGTATGAAAATTTTAAAATATCAGATTGAATTTGACA CGGGTTATCACCTTTTTTGGTGATTCCTTTGGTTGTAGGTGGAAATGAGCCCAACATGGCAGCAGTGGAAACTAAGAGAG TTCTGCAAGCAGAAAGGAATCCATGTAAGTGCATGGTCACCCCTGGGAGCCTACAATTCTGTGTACGGTTCAAATGCAGT GATGGAGAACCCAATCCTTAAGGAAATTGCTTGTGCAAAACACAAGAATGTGGCTCAGGTGCTCTAACTTTTCTAGATAT GAGAAGTTCATTTTAGAAAATAGTAAGGAGATTATGTCCATCTAAAAAATGAAGATAACAGTTTTATATGTCCCACATTT TTTATGTGGACATAATCTCATTATTTTGACAACCAGAGGATTGATTAACAAATGTACATTCATCTTGAGCAATGCCCTTG TCATGCAGATAGCACTGAGATGGATATATGAACAAGGGGCAACCACTATCGTAAAAAGCTTCAACAAGGAGAGGATGAAA CTAAACCTTGAACTATTTGATTGGGAGCTGACCCCGGAGGAATCACAGAAATTCAGCCAGATTCCACAGCATAGGATGTA TTCTGGAGATATGTTCATATCCAAAAATGGACCTTACAAGTCATTTGAAGAACTCTGGGATAATGACCCCTGAAATCTTT CCTAGTAGCAGCAAATTGTTCTTGAACCATAAGCAACTTTTCCTAGACATAATTAGGATCATCTATTCCACCAAAATAAA TAAAGTACATAAAGTACCCAAGTATATGCATCTATTTGTATCTTTGCATCTCCAGGTTGCTTGAGTTTAATGGGAGAAGA TTAGGTTATTATGCCTATGTTATTGAACCATAAGCAACTTTTCCTAGACATAATTAGGATCATCTATTCCACCAAAATAA ATAAAGTACATGAGATCAGAGATGGTACACTTTTTTCTCCAGTTCACATGACTAGCACAATACTATTTATAGATTGTAGA TACACATGATAATCCTTACAACACTCATAATGAACTCAGTCCCCATACTAAAATTTAGCCAATATACATACATGCCAACA CATGATTAAAAACTTGAGTTTAAATTT
CDS sequence (LotjaGi2g1v0187300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGCGAAGAAAATCCCAAAGGTGTTGCTAAACTCAGGGCAAAAGATGCCACTGGTTGGCATGGGAACTGCAGCAAT GCCTCTCCCACCACATGAAGCTCTCACCTCTGTCTTGATTGATGCCTTTGAAGTAGGATACAGACACTTTGACACTGCAG CTCTGTATGGAAGTGAGGAGCCTCTAGGCAAAGCTGTCGCAAAAGCTTTAGAGCTCGGCCTCATCAAGAGCCGCGATGAA GTATTCATCACTTCTAAACTATGGGGCACAGATGCACATCATGATCTTGTTCTTCCAGCTCTCAAGACCACACTGAAGAA GCTGGGGCTGGAGTATGTAGATCTCTATTTGATTCATTGGCCAGTGAGGTTGAGGCCTGAAACTCAAGGGATTAATGTAA CAGAGGATGATGTGATTCCCTTTGACATGAAAGGAACATGGGAAGCTATGGAAGAGTGCTCCAGATTGGGGTTAGCCAAA TCCATTGGTGTCAGCAACTTTGGCATCAAAAAGCTAAACCAGCTCTTAGAAAATGCCACCATCCCTCCTGCTGTCAATCA GGTGGAAATGAGCCCAACATGGCAGCAGTGGAAACTAAGAGAGTTCTGCAAGCAGAAAGGAATCCATGTAAGTGCATGGT CACCCCTGGGAGCCTACAATTCTGTGTACGGTTCAAATGCAGTGATGGAGAACCCAATCCTTAAGGAAATTGCTTGTGCA AAACACAAGAATGTGGCTCAGATAGCACTGAGATGGATATATGAACAAGGGGCAACCACTATCGTAAAAAGCTTCAACAA GGAGAGGATGAAACTAAACCTTGAACTATTTGATTGGGAGCTGACCCCGGAGGAATCACAGAAATTCAGCCAGATTCCAC AGCATAGGATGTATTCTGGAGATATGTTCATATCCAAAAATGGACCTTACAAGTCATTTGAAGAACTCTGGGATAATGAC CCCTGA
Protein sequence (LotjaGi2g1v0187300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAKKIPKVLLNSGQKMPLVGMGTAAMPLPPHEALTSVLIDAFEVGYRHFDTAALYGSEEPLGKAVAKALELGLIKSRDE VFITSKLWGTDAHHDLVLPALKTTLKKLGLEYVDLYLIHWPVRLRPETQGINVTEDDVIPFDMKGTWEAMEECSRLGLAK SIGVSNFGIKKLNQLLENATIPPAVNQVEMSPTWQQWKLREFCKQKGIHVSAWSPLGAYNSVYGSNAVMENPILKEIACA KHKNVAQIALRWIYEQGATTIVKSFNKERMKLNLELFDWELTPEESQKFSQIPQHRMYSGDMFISKNGPYKSFEELWDND P
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 2 | 316 | 315 | 6.7E-86 | ||
| PANTHER | 3 | 319 | 317 | 1.0E-167 | – | |
| PANTHER | 3 | 319 | 317 | 1.0E-167 | ||
| Gene3D | 6 | 321 | 316 | 8.2E-110 | ||
| SUPERFAMILY | 8 | 307 | 300 | 3.14E-87 | ||
| CDD | 12 | 285 | 274 | 3.50704E-86 | ||
| Pfam | 20 | 291 | 272 | 5.0E-47 | ||
| PRINTS | 42 | 66 | 25 | 9.2E-50 | ||
| ProSitePatterns | 46 | 63 | 18 | - | ||
| PRINTS | 103 | 121 | 19 | 9.2E-50 | ||
| PRINTS | 150 | 167 | 18 | 9.2E-50 | ||
| ProSitePatterns | 150 | 167 | 18 | - | ||
| PRINTS | 184 | 213 | 30 | 9.2E-50 | ||
| PRINTS | 228 | 252 | 25 | 9.2E-50 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi2g1v0187300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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