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LotjaGi2g1v0187400.1

Overview

Field Value
Gene ID LotjaGi2g1v0187400
Transcript ID LotjaGi2g1v0187400.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Chalcone reductase; TAIR: AT1G59960.1 NAD(P)-linked oxidoreductase superfamily protein; Swiss-Prot: sp|E7C196|MER_ERYCB Methylecgonone reductase; TrEMBL-Plants: tr|Q41399|Q41399_SESRO Chalcone reductase; Found in the gene: LotjaGi2g1v0187400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:61575749..61578223) extracted from Lotus japonicus Gifu genome v1.2.

CGAGTGGACACAACGACACAATATTATATCCCCATGAGTCACATTATTACTTTCCCTTTCATTATTTGAAAATGAAATTA AAACATCATTAGTACAACTACAAACATTACTCACCATAGCACTTAATCAGTGAGTGATCACTTTAAAAAGAGATAGTTTC TCCACTCGAAGTCATATTTTGTGGCAAAGTTACAGAAAAACAAGGAGAAATTTAGAAAACATGGCAGAAAAGAATGTCCC TAATGTGTTGCTGAACTCAGGACACAAAATGCCAGTTATTGGCATGGGAACTTCAGTAGATGATCGTCCATCAAATGATG TCCTTGCTTCCATCTTTGTTGATGCCATTCAAGTAGGCTACCGCCATTTTGACAGTGCTTCTGTGTATGGGACAGAAGAA GCAATAGGCCTAGCTTTGGCAAAAGCTTTAGACTTGGGTCTTATAAAGAGTAGAGATGAAGTTTTCATCACTTCAAAGCC ATGGAACACAGATGCACACCAAGATCTTATTGTTCCTGCTCTCAAGACCACATTAAAGTAATTTCTCACTTTTATATGTT TGGATTAACTTCTATTTTCTTAGAATCAATTCTAGGACATAGAAGCTACTCAGTGAAGCTTCTCCCTGTAATTTATTATG ACTTTAGAGTCAATTGTAGAAGAATTTCTCAACATGCCATTAATTGTGTGGTTTTCACTTCTTTCTTCTTACCATTAATG TTGCTTGAATGTTTTATGTGCTGTGCACAATCTTGTTTAGAAAGCTGGGGGTGGAGTATGTGGATCTTTACCTGATTCAT TGGCCAGTGAGGCTGAGGCATGATCTTGAAAACCCTGTTGTTTTTTCAAAAGAAGATTTACTTCCTTTTGATATAGAAGG GACATGGAAAGCTATGGAAGAGTGCTACAAACTAGGCTTAGCAAAGTCAATTGGCATATGCAATTTTGGTACCAAAAAAC TCACCAAACTCCTGGAAATAGCTACCATCACTCCTGCAGTGAATCAGGTACATATCATAAAGTGATTGACCAAAAGGATC TAGCTATCTGTTTTTGTATAGTGTTATCATCAGGGTTTTAAATTGCGGCTGCAGAATTGCGGATGAATGTGGGTTCAAAC TGCAATTGCGGTTGCGATATCGTTGCAAAAACTTCAAAATATTTTACATTGCGGCCGCAATTGAGGTTGAGGATCCCATT TTAAAACTTGGTTATCATAATGGTCTTGTGCTTCTTGGTATTTGTGATCATGATGATTTCAAATTATGTTTTCCTCAGGT GGAAATGAACCCATCATGGCAGCAGGGGAAACTGAGGGAGTTTTGCAAGCAGAAAGGAATTCATGTTAGTGCCTGGTCAG CTCTTGGGGCCTATAAGGTAACTTGGGGTTCAGGAGCAGTCATGGAGAATCATATCCTTCAAGACATAGCAACTGCAAAA GGCAAGACAGTAGCTCAGGTAATTGAAAATTATGAGCAAGAGAATCTAGCAATTGATAGCTTTCAATAATTTGTTGCACA TTCTGAAACAATAAACTAATAATTATCATAAGAAAAAGAAGCCACTACTTAAGACTTCATCAATCAAACATTTACAATAG AAAAGGAAAATTGTAATGTCAGGACCAATATTCATATAAAATGGCTATGTATCCTTTTAATTTACTAATTTAGCATCTGA TACATCTTTTTTTTCTTTCTTACTGCTCATCTTAATATATATGTTGTCATTTCAGGTTGCACTTAGGTGGGTGTACCAAC AAGGGTCAAGTGCCATGGCTAAAAGCTTCAACAAGGAGAGGATGAAACAGAACCTTGAAATATTTGATTTTGAGCTGAGT GAAGAAGAACTGGAGAAGATTAAGCAGGTTCCACAGCGCAGGCAATACTTAGGAGAAATGTGGCTATCTGAAAATGGGTC TTGCAAGACCGTGGAAGAACTTTGGGATGGCGATGTATGAAGATTTCTTCAAAGTTCATCATATGTATTAGGAAAATAAA CTTCAAGATTTGAATTCAATAATATTAGGTTGCTTATATCATCGTGTATTAGCATATGAGCAATCATGGTTGGCTCTATA TTCAGATGTATAGACCAAGCTAACCTCTACCTCAGTATTTACTTAGGAAGCGTCCTTGCTTGAATAAGAGTGAGTGTTGT GACGTTTGTGTGAGAGGAGTGGGGATGTAGAGTTACCATTATCATTCAAATGTAACCTCTGTAAAAGATGTCAAAGCTCT GTGGCTCTGCATACTTGTTCCATCTCCAAATAAACCAAAATGTTATTCTAAAACCATTTATGATACAAAGTTTGGGTTTC AAGAGAGAACTAGTGAATAACAACTAGTAAATGATGTCACATAACTTCTAACATGTTCAACTTCTATTTACAATGAAAAA CACAAAGTTTATCAATGCATACATCTATGCCCTTCCACCTTTCCCACCAAAGGCAGCAACCATTGTTGCTGTTCA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0187400.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCAGAAAAGAATGTCCCTAATGTGTTGCTGAACTCAGGACACAAAATGCCAGTTATTGGCATGGGAACTTCAGTAGA TGATCGTCCATCAAATGATGTCCTTGCTTCCATCTTTGTTGATGCCATTCAAGTAGGCTACCGCCATTTTGACAGTGCTT CTGTGTATGGGACAGAAGAAGCAATAGGCCTAGCTTTGGCAAAAGCTTTAGACTTGGGTCTTATAAAGAGTAGAGATGAA GTTTTCATCACTTCAAAGCCATGGAACACAGATGCACACCAAGATCTTATTGTTCCTGCTCTCAAGACCACATTAAAAAA GCTGGGGGTGGAGTATGTGGATCTTTACCTGATTCATTGGCCAGTGAGGCTGAGGCATGATCTTGAAAACCCTGTTGTTT TTTCAAAAGAAGATTTACTTCCTTTTGATATAGAAGGGACATGGAAAGCTATGGAAGAGTGCTACAAACTAGGCTTAGCA AAGTCAATTGGCATATGCAATTTTGGTACCAAAAAACTCACCAAACTCCTGGAAATAGCTACCATCACTCCTGCAGTGAA TCAGGTGGAAATGAACCCATCATGGCAGCAGGGGAAACTGAGGGAGTTTTGCAAGCAGAAAGGAATTCATGTTAGTGCCT GGTCAGCTCTTGGGGCCTATAAGGTAACTTGGGGTTCAGGAGCAGTCATGGAGAATCATATCCTTCAAGACATAGCAACT GCAAAAGGCAAGACAGTAGCTCAGGTTGCACTTAGGTGGGTGTACCAACAAGGGTCAAGTGCCATGGCTAAAAGCTTCAA CAAGGAGAGGATGAAACAGAACCTTGAAATATTTGATTTTGAGCTGAGTGAAGAAGAACTGGAGAAGATTAAGCAGGTTC CACAGCGCAGGCAATACTTAGGAGAAATGTGGCTATCTGAAAATGGGTCTTGCAAGACCGTGGAAGAACTTTGGGATGGC GATGTATGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0187400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAEKNVPNVLLNSGHKMPVIGMGTSVDDRPSNDVLASIFVDAIQVGYRHFDSASVYGTEEAIGLALAKALDLGLIKSRDE VFITSKPWNTDAHQDLIVPALKTTLKKLGVEYVDLYLIHWPVRLRHDLENPVVFSKEDLLPFDIEGTWKAMEECYKLGLA KSIGICNFGTKKLTKLLEIATITPAVNQVEMNPSWQQGKLREFCKQKGIHVSAWSALGAYKVTWGSGAVMENHILQDIAT AKGKTVAQVALRWVYQQGSSAMAKSFNKERMKQNLEIFDFELSEEELEKIKQVPQRRQYLGEMWLSENGSCKTVEELWDG DV
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF000097
2 316 315 1.2E-87
IPR020471
PANTHER
PTHR11732:SF430
4 320 317 3.0E-166 –
PANTHER
PTHR11732
4 320 317 3.0E-166
IPR020471
Gene3D
G3DSA:3.20.20.100
6 322 317 1.7E-109
IPR036812
SUPERFAMILY
SSF51430
8 304 297 6.42E-85
IPR036812
CDD
cd06660
12 293 282 7.93841E-86
IPR023210
Pfam
PF00248
21 292 272 3.4E-46
IPR023210
PRINTS
PR00069
42 66 25 2.6E-50
IPR020471
ProSitePatterns
PS00798
46 63 18 -
IPR018170
PRINTS
PR00069
103 121 19 2.6E-50
IPR020471
ProSitePatterns
PS00062
151 168 18 -
IPR018170
PRINTS
PR00069
151 168 18 2.6E-50
IPR020471
PRINTS
PR00069
185 214 30 2.6E-50
IPR020471
PRINTS
PR00069
229 253 25 2.6E-50
IPR020471
ProSitePatterns
PS00063
262 277 16 -
IPR018170

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0187400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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