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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0195400 |
| Transcript ID | LotjaGi2g1v0195400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Jasmonate zim-domain protein; TAIR: AT3G17860.1 jasmonate-zim-domain protein 3; Swiss-Prot: sp|Q9LVI4|TIF6B_ARATH Protein TIFY 6B; TrEMBL-Plants: tr|I1L443|I1L443_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0195400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:62937361..62945988) extracted from Lotus japonicus Gifu genome v1.2.
AACCACTCACATTAATCATGAAAAAAAAAACAACCGGTCAGCGAGAGTTTGGTGTTACACTGTCAACCGGTCAGCCCGTG ATGAGAATCGAATCTCTTTAAATCCAACGGTTCATATTTCATCTTCAAGACCCGCCACTACATGACCGCTTTTAATTTTG TTCATTCAATTTGTTCCTCTCATTATATACATCTCTGTTTTGTTCTGTCTCTGATTCTTCTTCTGCTCTTTTTCACTCCT CAAGAACCAACCAACACTTCACTCTTCTCCTCTCCCCCTCTCTCTCTCTCTCTGCACTTGTCAAAGTTCTATTCCTAGTG AAACTGAACACAGAATTTTTTGTGGGTCACTGACTTTTTTGTACCACATGGAGAGGGATTTTCTTGGCTTCAGTTCCAAA AATGGTCCACGGAGTATCATGAAGGTGGATGAAGCCAACAGAACAAGAGACCCAGGTAGCAGTTTTGATTATTTATTTGA ATAATATTTTTAGTTTCCATAAAAGAATTTTTTGTATTAGTCTTAAAGGTTAGAGCCGTTCCCCCTTTTTATCTTTGGAA TCTGAGTTTATTCTATTAACTTTTTAATTTTCAATTTATTGTTTTGTGAAGGGGATCGAGAAAAAAATTAGATTTGAGAT GTTTGATCTGGTGAACCATGTTAAGAATGAGAATATTTTCTACAATCAAATATATATCAATAACCATATATAAGGAAGAA CATGTACCTGAAAAAATTGATAATAAAATAAGGAAGAATGAACAAAGGGAAAGAAGAATTGCATTTGGATTGGACCCATT TGTAGCAGAAAATTCCAGCTATTATTGTTGGGAGCTATGTTGGTATGATTTTGATTTTTACTTTTTAGTGGATAAGAATA TCAAGAATTTAAGGTTTCCACCCATGGGTGGATATATGAATGAAGGTTATCAAGTGAAGTAGACCTGTAATTTGCAGCTA GCCTATCATACTGCATAATGATTGTTTTATTCAGATGAAGTATCTATCATACACAGTTAGACGACACTATGCAAGAAAAA TCCTGTAATGGGAGCCTAGCACATCATAGTTGGGTCCATCAATTATTTAATTATGGTTTCAAAGAAAAATGAGAGATTTA GTGATTTGATAAAAAAAAAATATAGAAATACTGGCCGAAAAAAAAGTGGGTGAATATTAAATGAGTCAAAAAAAAAAATG AACGTGATTATATCAAAAATGGATTTTTTTATGTATGGTGGGTGTGGAATGGCAACTTGCAGTGAGTTTTTTTTTTTGCC TAAGTTTGTGAGAGGGTCAACTATGTAGGTCACTCATTTTTTTAAAATCGGAAGAAGTTTATACAATTTCATCATACAAA TTTCATATTTTCATAATTTTTTTATAAAATTTTAATTTTTAAATAAATATTAATTTTTCATGTAACAAGTCATTTTAAAT TTTAATTTTTTTACGATAAAGAGTCTAACTAGTACTACTTTAAGACATTTTTTAAATATTTTTAATCACTTAATGCAAAT GATGCTTTTCTTTTGAATTAAATATTTTTACTTTAATTTCTTCCATTAGTATATTAAAGGCACTTATATATGATAATATA TATATAAGTTTAAATCTGATAAAGTCAGTAATTAATAGAGTGCAACAGTTTTCCGAACAAATTTACACGTATTAAAGACT ATAAAATAATTAAAGGTAGTTTGGCTAATTAGTCCTTAAAAAATCAATATTTTATTTTATTTTTAGTCTTAGAAGGGAAG GAGTGAAGGACACCTGTAATACTTTTAAATTATAAACAACAAATGCTATTTATTTTGTTGGATGGGTTAGCTACTAATTT ACAATAGAAACGTGTTCTCGGTTGTCTGGTACTATTTCTTTATATTCTATTGCAAAATGTGGTCCTACTTTTTGTTGCTT TCACTGCAGTTTTAGATTGATGTGCAATATTTAAATGATTAGCATGATCCATCAGATGTTTTTTTAAATATGCATGTCTG TGTGAACGAACAATAATATAAAACGATAAAAATATGTACACATTCATATATTTATATATGATAACATGGGCATCGTGATG CATGGCCATGAGAAATAAATAACTATTTTTTATGGTATTGACTAGCTGGTTGCAATGGGGTTTGCATAAAATATATTTGC AGAAGGAAACATTTTAATAAAATAAACAAGTGACAGCATAAAATATTGCAAGATGATATAATATTACCATATAGTACAGT ATTCCTTTGTGTTAAATGTTGGACTATGAATTAAATAATACTGATTCATAAGGAAATAATTTTTTCTTCTTACTTTTGGT TATTAAATTTACAATTCAAAGATGTGTTTGGCTTGAAGCTACCGACATTACAATAAACTAACAAGGTCACATGTGATGTA ATTATAAAATGTGAATAATGCAAGCACTCTAGCTTCTTATGATGAAAGTGCTACAGAGCTTCTACATGCTCCTTAATAGT TTTATTGTAAAGTTTTTTTATTTTTTTCATCTTGGTTGCTGAAGTTCTTCTGAGCTATTTGAGGTGATTAGTTTCACCTT TATAATTTCTTAACTTTTTTTTTTTTATAACTTTATTTATTTTATTTATGGAGAGCTACCTCAAATTGTCTCATTCTCTA TCTCACCAATAAAATTTTGAGTCAATTAAAATCCATTGTGTAAGCTTGTACCTGTCCCACTCATGTTGACATGACAATAT TTTACTATGCAGACAAGAAATTGAGACACTATTTTTTTGTACATCGGAAAATAAATTGAGACACTATTTGAGTGCATATA TCTTCATTTGCTAGAGTTTAAATATAGGTTGTGGGACATCATCTATCAAGTAAACCTTTATGTATTGATGGTGGTTAAAT TTGCATCAGACTGAGTTTTTCTTGCTGTATTCCTTTGTCTCTATTTAGTCCACTTTGAGATCCTTGCTTGATGAGCACAT TTTTCTTAGTAGTTTAGATCAAGGTCAAGACCAACATCACTCTACTAGTCTACTGTTTCACAGTTTGCAAAGCAATTAAT ACACTCTTTTTTATTTGGTTACTTATATCACACTAAAGAACTGAACTTCTTTTGATTTAGGTATCTATGTATGTCAATCA TCTTTGTTTACTGATAGATTTTCTTTTACAATATTTTCATCACTCTTGAGGTTGATTTCGTGTTCCTTAATAATTTGCTG CAGTGATGGGTTCAGGAATGCAGTGGTCATTCTCAAACAAGGTCCCAGCCCTTCCTCATCAATTCCTGTCTTTCAAGACC ACTCAGGAAGAAAGGTCCAGAAACAGTTCTATTAGTGATCCTTTAGCTTCATCTGGATATATGACCATCTCAACTAAAGA TGCTTTTGACTCTAACCAGAAACCATTCTTACAGGTTTTTTTCTTCTGATCTAGCTTTTACTTCAACAAAGGGTCTAGCT AGTCTTTTGAATGTTCTATCTTCTACCTTACAATTGTTAAAACTTAAAGTTAATTTTCACTTATAAGATTTCCTAGTGGT TTATAAGTGTGACTGTCATATTTAAGTTTTTTGAAATTTTTTCTAACTGTGAATTTTTCTTCTTACTATTATGATATTTT GTAGAAAAACTTGTCCATAGGCAAACAAGCAGGGAACAACCATGGAATGACAGTTTATCCTCTGCAATGTTCTGATGTAC AATCAGCTTGCCTTCAGGAACCAAGAAAATTTCCAGTTTCCAACCAATCTAAGCAAGTGAGTCCTGTTCTTCAATCTAAT CTAGCTACTACTGGATTCAACATGGTCAACTCAGTAATAAAGCCACAACCTCTTGGTTCTAAATCCTCTGCCACACCTGT ATCTGTTCTTCCACCAATTGGTTCCATTGTTGGCTCTACTGACTTAAGGTATCATAAATTTTAAAACATAAAAATTGTAA TTTCCTTTTTTACTGAAAATACTTGCTTAAGATATTCAAGCATGGTTTGAATGGCACAACTGAGAATTTTGTTTGTTTCT AAAGGAATTGTTCCAAATCCTCTGGCACACCTGCTCAGCTAACCATTTTCTATGGTGGTTCAGTATGTGTGTTTGATGAC ATATCTCCTGAGAAGGTATTTCTTTGGAATACTTGCTTTAATTCTGTTAAAATTTCAAATTAATCCCTTTGTTGTTTATA TTAAATATTTTTATATTTCTCTTCTGATCAGGCCAAGGCTGTCATGTTAATGGCTGGAAATGGATCTGCAGCAAATCAAA CCTTGGCAGTTTCCAAAGCTAAATTGCAGACAGAAATCTCTGCTCCTTCCAAAAATGGTGGTTTCATTATAAGCCAACCC TTTCCCTCATCCTCACCACTACCAGGCCCTCTCCCAGTGACCTCTCATGCTAGTTCTCAGCCTGGGAGAGGATCTTCTGG CAACAATGAACTTCCAATGATAAGACCAGCTGGACCTTCAACTGCCCCTAATAACCATTCAAGATCTGCAGCTACAAAAA TGATTCAACCAGGTACTTTTAGGCCTGGTCTCAATATTTTATAGAGAAACTGATAGAAATATAATATAAAACCATTCACG TGTCTCCCCTCAACAGCTTAAGCTTTTGGGTAGTTGGTTCATGACATGGTATCAGAGCCTCTATGCCAAATGGTATGAAA GTTTGATCCTTGTTATCTCTAATTATTCTAACCAACATTTGAATTCAGCACATAGTAGAAGAATATGTGTATAGTCCACG CTTCAAACCCAATTTGCTTTTGCTCGAGAGAGCATGTTGAAGATAAATATAAAACCATTCATTTTCTTCACCTAACAGCT TAAACTTTTAGGACAACTAATCCATGACAGAAACACTAATAACACATTCTTTGGTGCTCTTTTCAACCTAGTATTTAGTG TTGACAAAACAATGTGTGTCTGCACAGGCTAGCATTTCTCTTTTCTTTGAAAGTTAGTATCTTCTACTAGTTTATGTGAG ACACAGTAATTAATACCAAAGTTTTGTTGTGTTTCCAGGAGGCTTGCCTCAGGCACGTAAAGCATCATTGGCTAGGTTTT TGGAGAAGCGAAAGGAAAGGTAATATTCTCATAAAATTTCTCTATCACTCATTTTTGAGTAAGGCATAGAAAGTTTACAT GGGAAGTGTTTTCCTATGTTCTCCATTGAAGTTGTTTGGCCAATTTTGTTGGTGCCAGAGGATTGTTTTTAGCTGGAAAT GCACACACATACACTAGGAATCATGTATTTGAACTTTTTTGAAGATTCTCTGTGTGTTTGGGTACCAGTTGAGTGCAATG TGAATGAACTTTTACTCAATTCATGACTTAATATCTTTTTTGTCTCGAATGAATGTTAACGCCGTTTGTACTTATATCTA AGCATAAGCCTCTATAGCATGTACTCTATTCTTTTTGTCCTAGGCTAACACATTAGGAATTTAGCATTATAGAGTTCAAT ATAATTCTCTTGTCTTGGAAGTTTCTGAGTCTGATGCATGCTTTTGTAATTACCAGGGTGATAAGCACATTGCCATACTT CAAGTGCAACAAGACATCACCTGAATGCAGCACTCCTGGATCAGACAGTGTTGGTTTCTCCATGGACTTCTCTGGATCAT GTTCTCTACCTACCTCTAACTAGTCCTTAAGAAGAGGGTGTATGAAAGTTTAGATATATGATTTTGTAAGGTCGATTCTT TTGATCAATGGCAGAGAAATTTCTTAGGCATTTAGTTCATAATATTTTCTTTTTGAGCTTTTCATAATAATTGTTACTTT TTTGCAGTATTTTACTTCAGATCTTGGATGTTGTCATATGATATTTTTAGCTTTCATCATGTTTATAAATAATTATTTCT TTTTGTACAACAGTGAACACTCTTCAGATTCATTATTGCCGTGTAAGGCTGTTAGTGTTCAAATTATATTTAGACTTGTG TAATTGCAAGGCAGGGTTTGGTCAATGTTGAATATCTTTTCATCTGTTACATGTCTAATTACATGGCCAATTAAAAACCT TGGCTTACTTAGTTTCTTCGTATTGGTGGAAATTTTTCTTATGCTTTGCATTCATTGCCCAGAGCATAGCAGAATATGAT GTAACGCATAAGTATAAAAACTTTTTATACTGTTAGTGTATTTAGATTTTTTTTTTTTTAAATCAACCTTCATTCAATTA AGAAGAAACAGAGGGTCTAGAGGTCTTTACATCATCTTGGACAAAGTCAAATAACTGTTGAGGAACCTCCTCAATCTAAA CAAAATCCCCAAAAGAGAAAGACAACAATGCTAAAGCGTCGGCCACACGATTACCCGTTCGGCGGACAAAAAGTAAATCA AAGACATCAAAGTTCGGAAGTAAAAAACGACAATCCACTAAAATAGAATCTAAAATAGAGCAACCTCCAGTACGGTTCCA TGCATCAAAAACCACCTTGCAATCAGTCTCAAAGACAATCCGGCGGAAACCAAGATCCTTCGCCATAATCATCGACCATC TCAAAGCTTGAGCTTCCGCCACCGAAGGGGAGATTGACCGGCCTAGGAGAGAACATGCGGCTGCAAGGACTTCCCCATGG CAGTTGCGTGCAATCAGCCCAAACCCAGTCTCACCTCCACACCGGAAAGCAGTGTAACACCCCACTTTTCGTTATTAGGT TATTTATTATTTTATCTTAATTATTATTATGCTATATGGTAATTTGATGAATTATGTGATTATAATTTAAATCACATGTG ATATAGAATAAGATTTAGATAAATAAGTTTGTTAGGTTTTTGTGTGAGTAATTGAGAGTGGGGCCCATTAGTATGACTAT TTAAGGGATATGAGTGAATTAGAAAGAGAGAAATCAGAATTTGAGAATTGGAGAAGTTAGCAGAGGAGAAGAAAAGAAGC GTGAAAGAGAGAAGGGGAGAAAAGAGAAGAATAAACCTAGAATTTGATCTTCAAGAGGTAAGGGTTTGAATTTATCTTGT ATAATTGTAGAATAACAGAGGTTGAGTTTAACATGAAGGAACCCTCATCTTTTTTGAAAATTCAGAACTGAGAGACTGTG TTGAGTGTTAACATGTGGTGAGAAAAATTGATTTTGAGCGAAATTGAGGTTCCGGGGAAAATTGGGTTCTGTTATGTTTT GCCCGCAGATACCCTAACAGTCTGTGTTGTAGAGAGCATAACTCTCTCTACAGAATTCCAAATTGAGTGAAACCAATTTT GTATGAAAGCTAACTCATAGGGCTATGTTGGGTAATATTTTCATAATTTTTCGATTGCTGGTTCAATACCAGAATCATTT GCAAGTTTATTCTGTTTCTGCCCGCAGACACCCTAGCAGCCTGTGTTATAGAGACCATAACTCTCTCTACAGAATTCCGA ATTGAGTGAAACCAATTTTGTATGAAAGCTAACTCATAGGGCTATATTGGGTAATATTATCATAATTTTTAGATTTCTGG TTCAATACCAGAATTATCTGCAAGTTCACTCTGTTTCTGCTCGCAGAAACCCTAACAGCCTGTGCTGTAGAGACCATAAC TCTCTCTACAGAATTCTAAATTGGGTGAAACCAATTTTATATGAAAGCTAACGTATAAGGCTATGTTTGGTAAAATTTTC ATAATTTTTGGACTGCTCATTTAGTACCAGGATTATATGCAAGTTTGCTATGTTTCTGCTTATTTCTGAGATTGATTCTG AAACTGATTCTAGTAATTGATATGAGACATTTGATGATTTTGTGTTGCTATTTTGTCAGTGGAATAGTGAATGATTTGAT AATTGTATTGAAGTGTTATTTTGTGCAATTTTGGTGTGATTTCCGTTATGGAATTTGGTGAGAAAATATGTTATATATTT GGGGCTGGAGTGGTCTCAAAATTGCATGTTTTAATTTATGAGTTTTTGCACGAAATACACTTCATTTAGTCAAGAGGCAA CGTGTCGGTTTTCATCGGAAAACTGAGGTTTGTCCCAGAACTGGCATGGTTCTGGAAGTCTGGAGTGGACTTCATTGGTG GTTAACTGTCTGGAGTGGACGCGGTGATACCGCTAAGGTTAACAATTGGTACCACATGCATACATTAGAGTCTCACACAC TAAGTTTCACGTTTTCAGTGGTTTTATGTGTTTGGTGATTTGTTGGTGAATTGTTTTGCTGTTGTGGTAAAGTCGAATTA TTATTCTTCTTTAAGCTTATAATTTTTCGAAACATTAATAAGAATTGTGAAACTGTCTTGAGAGAAAATATTATAATCAC TCAGATTTTAAAGTAAAGGTGAAGAGTTTATAAAGCAGGATCTGAATTGTTTACTTGCTCTTTGTTATGTTATATTTTAT ACAATGTAAGTTCTTACCCTTCTGTTGGAATGATGTTCTATGCGACATCGCTCAGGTACAGGAGGTAGAGATGTGGCTCA TGAGGAGTAGCTTCGGAGAGTCTTAGCTTATGTTATTATTATTATTATTATAAAATAAGTGTCTTGCTCTGTAATGTAAC ACTGGTTAGATATTTTACGTTACTTTTACATTTATGTTGAGAGGATTTTATAATCTCTTCTTATGGAAGTTGTTGAATAA TTTTCTAAATGATGGCGATGTCGTACTGTTGACGGCCGAAGTGCTTATGAAATTCAGTTCTGAGTATG
CDS sequence (LotjaGi2g1v0195400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGGGATTTTCTTGGCTTCAGTTCCAAAAATGGTCCACGGAGTATCATGAAGGTGGATGAAGCCAACAGAACAAG AGACCCAGTGATGGGTTCAGGAATGCAGTGGTCATTCTCAAACAAGGTCCCAGCCCTTCCTCATCAATTCCTGTCTTTCA AGACCACTCAGGAAGAAAGGTCCAGAAACAGTTCTATTAGTGATCCTTTAGCTTCATCTGGATATATGACCATCTCAACT AAAGATGCTTTTGACTCTAACCAGAAACCATTCTTACAGAAAAACTTGTCCATAGGCAAACAAGCAGGGAACAACCATGG AATGACAGTTTATCCTCTGCAATGTTCTGATGTACAATCAGCTTGCCTTCAGGAACCAAGAAAATTTCCAGTTTCCAACC AATCTAAGCAAGTGAGTCCTGTTCTTCAATCTAATCTAGCTACTACTGGATTCAACATGGTCAACTCAGTAATAAAGCCA CAACCTCTTGGTTCTAAATCCTCTGCCACACCTGTATCTGTTCTTCCACCAATTGGTTCCATTGTTGGCTCTACTGACTT AAGGAATTGTTCCAAATCCTCTGGCACACCTGCTCAGCTAACCATTTTCTATGGTGGTTCAGTATGTGTGTTTGATGACA TATCTCCTGAGAAGGCCAAGGCTGTCATGTTAATGGCTGGAAATGGATCTGCAGCAAATCAAACCTTGGCAGTTTCCAAA GCTAAATTGCAGACAGAAATCTCTGCTCCTTCCAAAAATGGTGGTTTCATTATAAGCCAACCCTTTCCCTCATCCTCACC ACTACCAGGCCCTCTCCCAGTGACCTCTCATGCTAGTTCTCAGCCTGGGAGAGGATCTTCTGGCAACAATGAACTTCCAA TGATAAGACCAGCTGGACCTTCAACTGCCCCTAATAACCATTCAAGATCTGCAGCTACAAAAATGATTCAACCAGGAGGC TTGCCTCAGGCACGTAAAGCATCATTGGCTAGGTTTTTGGAGAAGCGAAAGGAAAGGGTGATAAGCACATTGCCATACTT CAAGTGCAACAAGACATCACCTGAATGCAGCACTCCTGGATCAGACAGTGTTGGTTTCTCCATGGACTTCTCTGGATCAT GTTCTCTACCTACCTCTAACTAG
Protein sequence (LotjaGi2g1v0195400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MERDFLGFSSKNGPRSIMKVDEANRTRDPVMGSGMQWSFSNKVPALPHQFLSFKTTQEERSRNSSISDPLASSGYMTIST KDAFDSNQKPFLQKNLSIGKQAGNNHGMTVYPLQCSDVQSACLQEPRKFPVSNQSKQVSPVLQSNLATTGFNMVNSVIKP QPLGSKSSATPVSVLPPIGSIVGSTDLRNCSKSSGTPAQLTIFYGGSVCVFDDISPEKAKAVMLMAGNGSAANQTLAVSK AKLQTEISAPSKNGGFIISQPFPSSSPLPGPLPVTSHASSQPGRGSSGNNELPMIRPAGPSTAPNNHSRSAATKMIQPGG LPQARKASLARFLEKRKERVISTLPYFKCNKTSPECSTPGSDSVGFSMDFSGSCSLPTSN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 32 | 368 | 337 | 1.4E-57 | – | |
| PANTHER | 32 | 368 | 337 | 1.4E-57 | ||
| SMART | 193 | 228 | 36 | 4.5E-18 | ||
| ProSiteProfiles | 193 | 228 | 36 | 17.711 | ||
| Pfam | 196 | 227 | 32 | 1.1E-18 | ||
| MobiDBLite | 267 | 309 | 43 | - | – | |
| MobiDBLite | 271 | 288 | 18 | - | – | |
| Pfam | 322 | 346 | 25 | 7.7E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0195400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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