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LotjaGi2g1v0196500.1

Overview

Field Value
Gene ID LotjaGi2g1v0196500
Transcript ID LotjaGi2g1v0196500.1
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Methyltransferase; TAIR: AT3G18000.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9M571|PEAMT_SPIOL Phosphoethanolamine N-methyltransferase; TrEMBL-Plants: tr|K7L0V0|K7L0V0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0196500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:63080611..63087513) extracted from Lotus japonicus Gifu genome v1.2.

AAAAAATGTACAATTGTTTCTATAAATAAGGAAGAAAGATAGAAGGGCGAAGGAAGAAGAGCTCTTAATTTCTCTTTTCT GTTCTTTATCTCTGCCATGGGTTCAGTGGTAATGCCGCAAGGTGAGTCCTGTTAATACATACACATGTTATATACATTTC CTTCATCCTTTAGCTAGTTGCACTACAACTTGTTTGTTTAATTGTTTGTTGAATAGTTGGTGTGTGAATTATTATGAGTA TGATATATTAATTGTTGGAAGTGTATGGTAATTGGTAAATGAAGGCATGGAAGGTGTTGTAGAAGAACGTGAAGTTCAGA AAAGCTATTGGATTGAACATTCTTCAGATTTGTCCATGGAGTCAATGATGCTCGATTCCAACGCCTCCAATCTCGACAAG GAAGAGAGACCAGAAGTGAGTTAGTTTCTTTTCATTTTGTACAAACTTACATGTTTCCTTTATTACCCTCTTCAAAATTT GTTATGAAAAGCTGGATATACTCTCTTTTTATTTCATATTTATGTATAACATCGTTTATGGATATTTACTTTTCACATTA TCGTTTAGACAAGAATAATATGCTTCCTTACAGTCTTACACTATGCTTACAAATATGGAAGCCAGAAGTTGGCTTGCATA TTTGTCTCATAGTTCACTTAATTTCTTTCTATTTTAGGATCTTTTATTTATTTGAGCTGAGAGGGTGATGGCCGTTTCTA TTTTTGAGTTGTTATTAATGCCCCAACACCTCAAATCACACCCTACAGTGATTTCCTAAAATGTCATTTGTTCTATTGCT TACCCCTCCCTAAAATTTGGTACAATTTTTTGCTATTTTCTATTAACATACCGATATTTAAAACCGGTGTATTTTCCTTT TGTAACAAAAAATACTGGTGTAAAAATTCAAAATTGTTGAGGAGTTCTTATACTCAAATCACTTCATATTCCAATTTGTT GTCCATATTTAATTTTATGCTTGTTATTACAAGCTATTCAGATTTAACAATGACTTTTGTTATATTTTGGTTCGGTTGAA AAAAAAAATGAAAGAAATGCAAGGGAAATTAAAGAGGAATGAAGATAAATGATTTTAAAGTTTTTTTTTAACAAAGGAAC AATTCTAAAGTTATTTATTATGAGAGAAATTGGAAGGAAAAGTAAAAAGAAAGAAAAAAATTATGTTGAAAAATGATATA AATCTCTTCAACTAAAATTGGGATGTGATAATTAATTAACTTTTGATAAAAAAAACTATTTAGCATACAGTTAAAAATAT ATCATTATTAATATTTATTATTATTATTATATTTTAATTATTTTTATAAGATGTGAATTGAAAAATATTTTAGACAAATC AGCACATGCACTTTCTAATATCAATTTTCTATGTACCAAAAAAAAATCACTTTTCTGTCCAAAATTGAGAAGGAAAAAAT GTTACATCAGCATTCATGTAATTTTTCCATAATCCCTGTTTTCCTTTCTATAAACAAAGGAAAATATATTGAAATCCATT TTTGTTAATCCTATTCATTTCCTTGCTTGCTTTCTTCACAATTTCAAACAGTGTGCACTACCAGCTAACTTACAAACTAT ATTTGGTTTTCTTTAGTTTCATTGGTCTAATTCACTCATTTTGTTAAAGTATTCATGTTTGCTTGTGAGACTAAATCTAT TTTAACACCTCTAGTGTTTGAAGCTGGGAACATTCACATCCTTATGATTGTGAATTTAAACTACTAAATTATTGGCCTGA GCTTCTTTTTTGATACTTGGAGGCTAGAAGCAGCATGAAACACTTGCAAATTTCTATTTGTCCCTTTTTCAGTATCCTTT ATTTTCTTCCTTTTAAGTCAGGATAAGTGATTTCTTAATTACATAGGTACTCTCCCTTCTACCTGCAATTGAAAGTAAAT CAGTTATAGAGCTTGGAGCAGGTATTGGAAGATTTACAGGTGAATTGGCTAAGAAATCTGGCCAACTGCTTGCTGTGGAC TTCATTGAGAGTGCAATAAAGAAGGTAACTACATTCTCTCACCACACTGAACATTCATGATTGATGTTTGTCAAATGAAA AAAAAAAAAGAGAAATTGGTTCTCTTGTTGTGAAGTGATTACCTGAATCTCACATTATCTTTCTGCAGAATGAAAGCATT AATGGACACCACAAGAATGTCAAGTTCATGTGTGCTGATGTCACATCTCCAAACTTGCATGTTTCTGAAGGATCCGTTGA TCTCATATTCTCGAACTGGTTACTTATGTATCTTTCAGATCAAGAGGTTATTTTTTTTTGTTTACCTTTTAGAAAAGTAT TAAGGCATAGAATTTTCAAGGTTTTGTTTTTCAGTTAAGATATGTTGAAGTTAACATAATGTATCAAAATGTTTGGTATT CACTTCAGGTTGAGAATTTAGCTGAAAGGATGATCAAATGGTTAAATGTTGGTGGATATATATTCTTCAGAGAATCTTGT TTCCACCAATCTGGAGATTCAAAGAGAAAATACAACCCAACACACTACAGGGAACCCAGATTTTACACTAAGGTTTGTTC TTAGTGTAATTTGTATTCCCTCTTAGTCCAAGTCCAACAATTGCTTTATTAAAGATATGAGTTCGACATTTTTGGGCTTA TGTGAAATGTTGTGAGTTGTATTTCATGGAGATAGTACCTTCAAAATACATAAAACAACCTATGATGCATAAATTGAATT TCTGATGGTAAAGACAGACCCTAATCTCATGGGGTTCCATTCAGTTTTACCATTTGTTATCCATACACCTTATTTTCCCC ATTTTCATGCAGGTATTCAAAGAGTTCCATATGAGTGATAATAAGGGGAGTTCCTTTGAACTTTCTCTTGTTGGCTGTAA ATGCATTGGAGCTTATGTCAGAAATAAGAAGAATCAAAACCAGGTGATAATAAGGGTTTCTATTTCTTTTATCATCTCTT ATTTCAGCTTGTTTGGTTAATGGTCAACACATGTGATTTGAAATTGTAACACTGTGATGCAGATTTGCTGGATATGGCAA AAGGTTAGATCACAAGATGATAGGGGGTTCCAGAGGTTCTTAGATAGTGTTGAGTATAATCATAAGGATATTTTACTTTA TGAGAGAGTTTTTGGCCAAGGCTTTGTGAGCACTGGAGGACTTGGTATGTAATTACCATTTTCCTATCAATGTGTTCCCT GTTATCCTATATATAGAGAATTTCCCTTCCATTTAATTTAAGATGGAGGAATGATCTTCATCAATGATACCATTATGGCT TAAATAAGTTTTTAGTCCCAATTTTTACACTTAAATTTGATTTTGGTCTCTACCATCTAATTTTTATGGTTTTGGTCCCT ACTTTTACAAATAGCATTAATTTCAGTCTCTGATTTATAATATCTTACTGTTCAACGGGGATGTGGCTAATAGAGAGTCA CGTCACAAGCACCACATGTCCTGATAATGTTGAATGAGCTATGTTGCTTCCAAGTCATATCTGATAGCTAGTACTTTTAA TAAAAAACAAGGCTTAATACATCAGAAGGCCCCTGTAATTATAAAGGGAATCAGTTCCAGGGCCTGAAAAATTTTCGCAT CAAATTGGGTCCCTAAGAAATTTTTTTTAATTCAATTAAGGCCAAATCTCAATTTTGTCCTAGTCATCAGTGACACCTGG CTTTTATAATTTTTTTTTAATTAAAAAATATTAAAAAAATAATTTTTAATACCAAGTCATCAAAATAATCAGAAAAAAAA ATTAAAAATCTTAATAAAAACCTAATCTAATAATATAATCTAAACATAATCTAATTATTACCAAACCCAAATCTTTCCCC AAATTGAATTGACCTTGTGCAATTTTGTTTCATTACATGAAAAAGAAAACAGGGGAAAAGCAGGGGAAGAAAACTGCACA AAATTGCCCTCACCACCGTTGAAGAGCAGACCTTCACCACTCAAATCTGAGTAATCAACTCTTATTTGCTTCCAATCCTA CCAAACCCCATCATCTTCATCACCATAACCTTCTTCACACATTGAAACATATACAAATTTACCAACAAATCAAAGATCAC GACGAACCAGAACCCTAAAATTAAAAAATTTCCACCAGAACCACCATTTTTAATTTCCAAAACCTAGGTTTAGAACCTAA AATTTTCTCTTCAAAATCTTCATCCCCAACATCACCAACATCCAGGAACACTCAATCACCACCTTGATGATCGCTGTCGC AAGGAGAAGGAGATCCAGTGGCCCTTGCTGTCGCCGCCGCTACTCCGCCACTGACCGCCGTCTCCGGTCGTCATCTCCGG CGACCTCCTTTTTCATAAAGGAAGGTACTTTCTTGAAGATCTTCCTCTCCTCTCTTTGAATCCGAGATCAGAACAAAGAA AGGAGCCTGAGAGAAGCTTGATTCTAACTTGAGTTTGAGGTTTCTGTATTGAGATTTCTTAGTTTGGGTTTTGGGTTGGA GATCCTGATTATGGGATTATTGGGTTAAGATTTCTGGGTTTGGGTTAAGAAGAAGAAGGTTGAGGAGGAAAAGATGAGAA AAAGAAGGAGGAGGAGGAGATGAGAAAAAAAAACGATGGATGAAAGAAGATGAGAATATCAGTCAGAATTATATTATTGG ATTAGTTTAGGGTTGGAGATCCTGATTCTGGGATTATTAGGTTAAGATTAGAGAGTATTAGTGATTAGTTTAAGGTTTGT ATTAAGTTTTTATTTTAAATTTATGATTTGGAATTAAAAAATTAAGTTTTGGAAATTTTTAATTAAAAAATAAATTAAAA TGCCATGTGGAAAAGCTAAGTAGGCTAAAATTGAAGTCACATCACCGTCTGACACACTTTGTCCTTAATTGAATTAAAAA AATGTCTTAGGGACCCAATTTGATGCGAAAATTTTTCAGGCCCTGAAACTGATTCCCTTTACAATTTCATAGCGATCGAG AAACGATAACCTTTCCTAGATCTCTTTTTTATAACAAGAACTAGCCATTGATCTGATTTGGAAGCAAAATATGTCACATA ATATTACTCAGTACGCATAGTGGCTAGCTGCATCACCTGTTAATAGTGAGATATCTTAAAGCGGAGACTGAAGCCAAAGT AACTTGTAAAAGAAGAAATTAAAATCATAAAAATTAGATGATAGAATCAAAACCAAATCTGACAGTAAATAAAATGGAGG GCTGAATACTTATTTGAGCCTATCCTTATCATTTAACTGATCCATGGACTGGAAAAAAGGTTTGATGTTTCATTACTCAT CACATAAAGTAGCATTCCATCAATGTAAAGGCAATTTATTGTAGATTTCAGATAATTCTAATGTACAAGTTATAATTCCT TGAGCAGAAACAACAAGGGAGTTTGTGGCAAAATTGGGACTAAAGCCTGGTCAGAAAGTGCTGGATGTTGGTTGTGGTAT TGGAGGTGGTGACTTTTACATGGCAGAAAATTTTGATGTTGAGGTTGTTGCCATTGACTTCTCCATAAACATGATTTCCA TGGCTATTGAACGAGCCATTGGACTCAAATGCACTGTGGAATTTGAGTGTGCTGATTGCACTAGTAAAACATATCCTGAG AACACATTTGATGTGATCTACACTCGTGACACCTTGTTTCACATCAAAGTAAGGAAGCATCTTTGGTTTTATTTGTTACT GTAGATTTTAGCAAAGTTAAGCTTTATAGAATATGTGAATAGATAACTTACAAGGATTTGTACAGGATAAACCAGCACTT TTCAGATCATTTTACAAATGGTTGAAGATTGGAGGTACGCTTTTGATTACGGATTACTGCAAAAGTGGTGGAGATCTATC ATTAGAATATGCTGAGTACATAAGAAAAAGAGGATATTATATCCATGACATGAAAGCATATTGTCAGGTATGATATCATG TGATGCTAGTATCATCAATTGAAGTTATTCTGGTAACATTTGTTTTGCATGACATGCTTCTTGTATTCTAAATCATCCAC AGATGCTTGAGAATGCTGGATTTGATGATGTGATTGCAGAGGATCAAACAAATTTGGTTTGTCACACAACCTATGATTTA TAGCATGTTTGAATCGGCTTATTTTTCCTTAGAATCAATTCTGACATCAGAAACTACTCATATTAGCTTCTTCCCATAAT TGATTCTAGCTTTAAAATCAACTATAGAAGGATTTCACATTTTACTGCCCTATTGGAGTTGTAACAAAATTATCAACTGT GTTTCAGTTCATGAAAACTTTGCAACAGGAGTTACTTGGCATTGAGAACAAGAAGGAAGATTTCATTGATGACTTCTCTG AGGTGGTTTTCTTATGTGTTTTGAACATGGCTATTTATAGTATGTTTGCATCAGTTTATTTTCCTAAGAATGAATTCTGG TATCCAAAATCTTCTCTCCATGATTGATTTTTTCTTTAAAATCAGTTGTAGAAAGATTTCCAAACATGCTATTAGTTACT TTTTTAGGTGCTTATTTCTTTTAAATTCAAGTCAATTCATTTCTGGAATCATTGCTTTCAGGAAGACTACACTGAAATTA TTGAAAGATGGAGGGCTAAGCAGATGAGGGGTGCAGCTGGTGAGCAGATATGGGGATTGTTCATTGCCAAGAAAAAATAA TGCTTCATTCTATAATGATGTCTTGTAATGACTATCTTTAGTTCAGTGTGAACAGTTTTCTAAATAATGGTTTAGATAAG TATTCTTGTTATAAAGTATTTGTGTGTTGTAGCAGAAGATGAAGGAAACATTCTATGCATCCTCTTGTATTTGAATGTGA TGCTGACTAATTAATATGGCTTCTGTTCAAAATGTTTTTGGTTGGTTTGACACGTTTCCACCTTTGAAAGTAGTTATTAA TTAGTGCAGTGTATGGAAATCCG 

CDS sequence (LotjaGi2g1v0196500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGTTCAGTGGTAATGCCGCAAGGCATGGAAGGTGTTGTAGAAGAACGTGAAGTTCAGAAAAGCTATTGGATTGAACA TTCTTCAGATTTGTCCATGGAGTCAATGATGCTCGATTCCAACGCCTCCAATCTCGACAAGGAAGAGAGACCAGAAGTAC TCTCCCTTCTACCTGCAATTGAAAGTAAATCAGTTATAGAGCTTGGAGCAGGTATTGGAAGATTTACAGGTGAATTGGCT AAGAAATCTGGCCAACTGCTTGCTGTGGACTTCATTGAGAGTGCAATAAAGAAGAATGAAAGCATTAATGGACACCACAA GAATGTCAAGTTCATGTGTGCTGATGTCACATCTCCAAACTTGCATGTTTCTGAAGGATCCGTTGATCTCATATTCTCGA ACTGGTTACTTATGTATCTTTCAGATCAAGAGGTTGAGAATTTAGCTGAAAGGATGATCAAATGGTTAAATGTTGGTGGA TATATATTCTTCAGAGAATCTTGTTTCCACCAATCTGGAGATTCAAAGAGAAAATACAACCCAACACACTACAGGGAACC CAGATTTTACACTAAGGTATTCAAAGAGTTCCATATGAGTGATAATAAGGGGAGTTCCTTTGAACTTTCTCTTGTTGGCT GTAAATGCATTGGAGCTTATGTCAGAAATAAGAAGAATCAAAACCAGATTTGCTGGATATGGCAAAAGGTTAGATCACAA GATGATAGGGGGTTCCAGAGGTTCTTAGATAGTGTTGAGTATAATCATAAGGATATTTTACTTTATGAGAGAGTTTTTGG CCAAGGCTTTGTGAGCACTGGAGGACTTGAAACAACAAGGGAGTTTGTGGCAAAATTGGGACTAAAGCCTGGTCAGAAAG TGCTGGATGTTGGTTGTGGTATTGGAGGTGGTGACTTTTACATGGCAGAAAATTTTGATGTTGAGGTTGTTGCCATTGAC TTCTCCATAAACATGATTTCCATGGCTATTGAACGAGCCATTGGACTCAAATGCACTGTGGAATTTGAGTGTGCTGATTG CACTAGTAAAACATATCCTGAGAACACATTTGATGTGATCTACACTCGTGACACCTTGTTTCACATCAAAGATAAACCAG CACTTTTCAGATCATTTTACAAATGGTTGAAGATTGGAGGTACGCTTTTGATTACGGATTACTGCAAAAGTGGTGGAGAT CTATCATTAGAATATGCTGAGTACATAAGAAAAAGAGGATATTATATCCATGACATGAAAGCATATTGTCAGATGCTTGA GAATGCTGGATTTGATGATGTGATTGCAGAGGATCAAACAAATTTGTTCATGAAAACTTTGCAACAGGAGTTACTTGGCA TTGAGAACAAGAAGGAAGATTTCATTGATGACTTCTCTGAGGAAGACTACACTGAAATTATTGAAAGATGGAGGGCTAAG CAGATGAGGGGTGCAGCTGGTGAGCAGATATGGGGATTGTTCATTGCCAAGAAAAAATAA 

Protein sequence (LotjaGi2g1v0196500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGSVVMPQGMEGVVEEREVQKSYWIEHSSDLSMESMMLDSNASNLDKEERPEVLSLLPAIESKSVIELGAGIGRFTGELA KKSGQLLAVDFIESAIKKNESINGHHKNVKFMCADVTSPNLHVSEGSVDLIFSNWLLMYLSDQEVENLAERMIKWLNVGG YIFFRESCFHQSGDSKRKYNPTHYREPRFYTKVFKEFHMSDNKGSSFELSLVGCKCIGAYVRNKKNQNQICWIWQKVRSQ DDRGFQRFLDSVEYNHKDILLYERVFGQGFVSTGGLETTREFVAKLGLKPGQKVLDVGCGIGGGDFYMAENFDVEVVAID FSINMISMAIERAIGLKCTVEFECADCTSKTYPENTFDVIYTRDTLFHIKDKPALFRSFYKWLKIGGTLLITDYCKSGGD LSLEYAEYIRKRGYYIHDMKAYCQMLENAGFDDVIAEDQTNLFMKTLQQELLGIENKKEDFIDDFSEEDYTEIIERWRAK QMRGAAGEQIWGLFIAKKK 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles 4 499 496 266.813
SUPERFAMILY 10 215 206 5.88E-29
PANTHER 15 498 484 6.2E-292
PANTHER 15 498 484 6.2E-292
Gene3D 17 253 237 7.7E-67
CDD 65 164 100 3.74484E-10
Pfam 65 160 96 1.4E-12
Gene3D 258 499 242 1.0E-76
SUPERFAMILY 261 498 238 2.23E-46
Pfam 280 434 155 6.4E-20
CDD 293 394 102 1.28731E-13
Coils 444 464 21 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Phosphoethanolamine N-methyltransferase activity Catalysis of the reaction: S-adenosyl-L-methionine + ethanolamine phosphate = S-adenosyl-L-homocysteine + N-methylethanolamine phosphate.
Biological process Phosphatidylcholine biosynthetic process The chemical reactions and pathways resulting in the formation of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0196500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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