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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0210200 |
| Transcript ID | LotjaGi2g1v0210200.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heavy metal-associated protein; TAIR: AT3G25855.1 Copper transport protein family; Swiss-Prot: sp|O49613|HIP25_ARATH Heavy metal-associated isoprenylated plant protein 25; TrEMBL-Plants: tr|K7LEQ4|K7LEQ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0210200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:65727048..65729762) extracted from Lotus japonicus Gifu genome v1.2.
CTTTGTTTATTCATGTTGTGGCATGCGCATAATAGGAACAAAGAAGCCGAGAATAATGTGAGGAACTACGCTACATTGCC TTCTTAAGCATACCTTGATTAAAATAGAATCAGGTTCTGAAATTAAATAGGAGAATCAATTTCATCAAACTAAAATGCTA ACCAGCTCATTATAAACCCTTTATAGCTTTCAAATTTTTCTTCTTGCCTTTTAAGTTTTATGATCAACTTTTCTTTACCT TGCTCATTCATGCACACCCTTTTGGATTTTCAAACATCTGTGACTTTATCTCTGTGATCTTGGTTTCTCACTGTCTCACT TCAATTGATTTCATGACAGTGAAGGCAAAATATCTAATTAATCAGATTTTCTCTGTTTCTCAAGCTATTCATGCATACCA TTCTGAATCATTTTTTGGTTCCTTTTGTTATAGTACTTCTGTATGGTGATGAGGATCAATATTGATTGCAATGGTTGTTA CAGAAAAGTGAAGAGAGCCCTTCTTGACATGTCAGGTTAGACTTAGACATTAGTCATCAACTCATCATTCTTTGTAATAT TGTAATTGAGTATTACATTAATTGTAGCTTCGTTAATTTGTTGTTTTGTTAGAGTTGGAGAGCCATTTCCTAGAGAAGAA CCAGACCAGGGTAATTGTGTGTGGCAGGTTTATCCCACAGGATGTTGCAATCAAGATAAAGAAAAAGACTAATCGTAGAG TTGAGATCTTGGAGATACAGGACTTGAGCGAAGATAACAATTCTGAAATGGAAGAAGAAGAACAAGACCAGAAACCAATG AATAATAATTGGACTCTTCTAGCCACCAGGAATCAAATGGGAACGTGTCTTGTTTGATAGAAAAACTGCCACAACCTCAA ATTGTGGTATGTGAATTGCACATTTTGATGTATTATTCAAAGAATTATAACTTCTCTAACTGATTATTGCAATAAATCTC ATAATTTAAGTGTTCATGTCTCTGTGTTTGGTTATTGGTCAAAGGATAGATTTTGTTAACTTCAATGATTTTCATGTGTA TACTCTTTCTCAGACTTTAGGCCTGAAGAAGTTACCTAGTAGGGAATTGGGTTATGTTAGAAACAGAAATTGTAAATCCC TGATTTTGTATCATGTACTAGGCCTTGAAAATATGGCTGGGTTGAATGTTACAAAAGCAGAGCTTAAGAATTTAACAAGG AAAAATAAAGAGAAAGAAAGGCTTGCTGCAAATACAGAACATAACATAAACTGTATTTAACTTACAAATAACCAAGAGAA GTACCCCCCAAACTGAGAGTACCCCAAAGCTTTACATGTCCCTATACCCTATTACACACAACACAACACACATTTATTCA TCTATCTATTGAACACTGCATAAGATACATCTCATGTTACATAATGTATGAGGCAAATTATTCATTTCAGAAGCAGCAAC AGCATACTATCTTTGCATCAATCCATTCTAATGGTTTCCAGTGCCAGGAAGCTTCTCCTTGATCTTATCCATTATCCCTT TCTTCTCATGATGCTGCTCTCCATGGTGACCAGTAGTGGTAGTGGTAGTGCCGGTGGTCCCACCACTGCCATACTCATGA GTGGCGGTGGAGCCGGCACAAGGAAGCTTTTCCTTGATCTTATCCATTACTCCACCACCGCCACCGGTACCAGTGGTTCC ATACTCTGTTCCATGACCACCAGTTCCATACCCTGTTCCTGTGCCGGTGGTTCCATGACCATGAGTGCCGGTAGTTCCAT AGTCTGTTCCATGACCACCAGTTCCATACCCTGTTCCTGTGCCGGTGGTTCCATGACCATGAGTTCCGGTGGTTCCATGA CCATGAGTTCCGGTGGTTCCACCGGTACCGGGAAGCTTCTCCTTGACCTTATCCATAACTCCTTGCCCCCCGCCACCACC GGTGGTTCCATACTCTGTTCCAGCACCAGTTCCATACCCTGTTCCTGTGCCACCAGTGTGTCCATATCCTGTGCCAGCAC CACTACCATACCCATGAGTGCCGGTGGTTCCACCGGTACCAGGAAGCTTCTCCTTGATCTTGTCCATTACGCCTGTGCCA CCGCCGCTACCGGTGGTTCCATACCCTGTTTCATGGCCACCAGTACTATACCCTGTACCACCACCGGTTCCAGTGCCACC GCCGCCAGTAGTTCCATACCCTGTTTCACCACCAGTTCCATACCCTGTTCCTGTGTCTCCACCAGTGGTTCCGTACCCAG TGCCGCCAACACCGGTAGTTCCATGGTGTCTCCCGGTGTCAGCGGTATAGCCACCACCGGTACCGGTGTGACCACTCTGA TGAACAGGGTTGCCGTATTGGTCAACTGGGCTACTCACTGGGTTTCCATACTCATCAACCTTGCGGGCTTGATCACCATA CTGCTCTTGAAAATGCGCCATTGTTTCCTAAAGAGAATGCACAATCGAAAAGTGAAGTTGGTTACTGAGAAGTTTTTGAA TGTTCAGAATATGATTTGAAACTGCTTTGGATGATGGAAGAGAAGTTGATACATGGTGTTTATATAGGGAAATGGAGGGT GAAAATCTGGTTATGGAGCACTCGGTTTGGTTTGTGAATCTCTGACACGTACCAAGTGGCGTTTGTGTTGAAGCTGCCAC GTATGAGGACACGTGTTGGTGGTTTCTGATTTCATGAAAACCGTCGGTGGCATTGGATTTTGGAGGACACGACGC
CDS sequence (LotjaGi2g1v0210200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGATGAGGATCAATATTGATTGCAATGGTTGTTACAGAAAAGTGAAGAGAGCCCTTCTTGACATGTCAGAGTTGGA GAGCCATTTCCTAGAGAAGAACCAGACCAGGGTAATTGTGTGTGGCAGGTTTATCCCACAGGATGTTGCAATCAAGATAA AGAAAAAGACTAATCGTAGAGTTGAGATCTTGGAGATACAGGACTTGAGCGAAGATAACAATTCTGAAATGGAAGAAGAA GAACAAGACCAGAAACCAATGAATAATAATTGGACTCTTCTAGCCACCAGGAATCAAATGGGAACGTGTCTTGTTTGA
Protein sequence (LotjaGi2g1v0210200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVMRINIDCNGCYRKVKRALLDMSELESHFLEKNQTRVIVCGRFIPQDVAIKIKKKTNRRVEILEIQDLSEDNNSEMEEE EQDQKPMNNNWTLLATRNQMGTCLV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 104 | 104 | 2.6E-56 | – | |
| PANTHER | 1 | 104 | 104 | 2.6E-56 | – | |
| Gene3D | 1 | 66 | 66 | 2.2E-6 | – | |
| SUPERFAMILY | 4 | 63 | 60 | 4.97E-6 | ||
| MobiDBLite | 70 | 91 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi2g1v0210200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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