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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0224900 |
| Transcript ID | LotjaGi2g1v0224900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial import inner membrane translocase subunit tim17; TAIR: AT2G37410.1 translocase inner membrane subunit 17-2; Swiss-Prot: sp|Q9SP35|TI172_ARATH Mitochondrial import inner membrane translocase subunit TIM17-2; TrEMBL-Plants: tr|I1MM17|I1MM17_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0224900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:68107056..68107676) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGAACGCCGGAGACATCACGAGAACCATGCCCCGATCGGATCCTCGACGACATCGGCGGCGCGTTCGGAATGGGAGC GGTGGGTGGCTCCGCCTTCCACTTCCTCAAGGGCCTACACAACTCCCCTAACGGCCAACGCTTCCTCGGCGCCTCCCAAG CCGTTCGCCTCAACGCCCCACGCGTCGGTGGCAGCTTCGCCGTCTGGGGCGGCCTCTTCTCCGCCTGCGACTGCACCCTC GTCTATGCCCGCCAGAAGGAGGACCCCTGGAACTCCATCCTCGCAGGTGCCACCACCGGCGGCATCCTCGCCATGCGCCA GGGTCTCCGCGCCTCCGCCCGCTCCGCCGCATTCGGGGGAGTTGTACTTGCTCTCATCGAGGGTGCTGGCATCGCCCTCA ACAAGTTCATCAGCACGCAGCAGCCCATGCCGGAACTCATGGAGGAGCCAGTGGTGGCCACTGGGTTTCCTTCAGAGGAT TCAGCCTCCGTCGGGACATCGTGGCTCGGTGGTTTGCTCGGCAGAGGGAAGAAAGAGGATCCTCGCGAGAGCGCCGGAAG CCAAACGAAGATTCTGGAGAGTTTTGATGCGCCCCCTGTGCCTAATTTTGAGTACAATTGA
CDS sequence (LotjaGi2g1v0224900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAACGCCGGAGACATCACGAGAACCATGCCCCGATCGGATCCTCGACGACATCGGCGGCGCGTTCGGAATGGGAGC GGTGGGTGGCTCCGCCTTCCACTTCCTCAAGGGCCTACACAACTCCCCTAACGGCCAACGCTTCCTCGGCGCCTCCCAAG CCGTTCGCCTCAACGCCCCACGCGTCGGTGGCAGCTTCGCCGTCTGGGGCGGCCTCTTCTCCGCCTGCGACTGCACCCTC GTCTATGCCCGCCAGAAGGAGGACCCCTGGAACTCCATCCTCGCAGGTGCCACCACCGGCGGCATCCTCGCCATGCGCCA GGGTCTCCGCGCCTCCGCCCGCTCCGCCGCATTCGGGGGAGTTGTACTTGCTCTCATCGAGGGTGCTGGCATCGCCCTCA ACAAGTTCATCAGCACGCAGCAGCCCATGCCGGAACTCATGGAGGAGCCAGTGGTGGCCACTGGGTTTCCTTCAGAGGAT TCAGCCTCCGTCGGGACATCGTGGCTCGGTGGTTTGCTCGGCAGAGGGAAGAAAGAGGATCCTCGCGAGAGCGCCGGAAG CCAAACGAAGATTCTGGAGAGTTTTGATGCGCCCCCTGTGCCTAATTTTGAGTACAATTGA
Protein sequence (LotjaGi2g1v0224900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLHNSPNGQRFLGASQAVRLNAPRVGGSFAVWGGLFSACDCTL VYARQKEDPWNSILAGATTGGILAMRQGLRASARSAAFGGVVLALIEGAGIALNKFISTQQPMPELMEEPVVATGFPSED SASVGTSWLGGLLGRGKKEDPRESAGSQTKILESFDAPPVPNFEYN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 206 | 206 | 7.2E-99 | – | |
| PANTHER | 1 | 206 | 206 | 7.2E-99 | – | |
| Pfam | 16 | 122 | 107 | 2.3E-27 | – | |
| MobiDBLite | 159 | 206 | 48 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0224900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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