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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0230500 |
| Transcript ID | LotjaGi2g1v0230500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Caffeoyl-CoA O-methyltransferase; TAIR: AT4G26220.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9C5D7|CAMT3_ARATH Probable caffeoyl-CoA O-methyltransferase At4g26220; TrEMBL-Plants: tr|I3T4A8|I3T4A8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0230500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:68999886..69001284) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAACACATTAAAAATCCATCAATTTACAAACAACCAGTCATACTGCAGAGCGAGGACTTAACTAAGGTATGTCTGCA AATTTATCTTGAAATTTTTCCTTGTTTTCAGTCATGGCACAAACAGATAAATGTATATCTTGAAAACTCATATATCAATC GTATATTCATGTCTAACACAACATGAACAATGATATGACAGTATATACTAGAGACTGCTGTTTACCCTCGAGAACCACAA CCTCTCAAAGAGCTGAGGGATGCCACTGAGAGTCACCCTTGGTAATCATTCAGCCTTTTGTTAATTGTGATCGACTTCCA CATTTGATTTGAGATTAAAACAAAACTAGGTGCATGTTTGGATACACGGTATAAAACCGGTGATGTCCAAATCACAGTGG ACAGTCACAAAAGATAAGGGAAGTTGCTTCTGTCCACCGTGAGTTTGGCTGACCATAGTTTTCCACCGTATCCCAACATG CACTAGAAAGGTTTCAACCTGGTAAGGGATGAGGGATGTCACTGATAATCAATCACCCTTGTTAATTATTCTGTCTGCTG CAATTGTGACTTCCCCATCTGATTTGAGACTGAAACAGAACTAGAAAGATCTCAACTGACTTGTTTTCACATTCTTTCAG GGGTTTCATAGCTACTTTACCCGAAGCGGGTCCGCTAATCACCATTCTTCTGAAGCTGCTGAACCCCAAAAAGACAATTG AAGTGGGAGTGTTTACTGGATACTCTCTTCTCCTCACTGCACTCAACATTCCTGATGATGGAAAGGTTTGCATAGAGGAT TTAATTTCCATAGATATCCTAGGTGGTCTAATTCAGCGATGCCTACTTGAACTAAAAATTCATTGATTTTGCAGATAACA GCCATAGACATTGACAGGAAAGCTTATGAGGTTGGATTACCAGTCATAAAAAAGGCTGGTGTGGAGCACAAGATTGATTT CATAGAATCTCCAGCTCTACCAATTTTGGATAAACTGCTAGAAGATGTAAGCACGTTCCTTCTGTTTGTCTTAGATCTGT TACCACTTAAAGGTTCACATTGGTTTTTATCAGCTGATTTGTGACTTTTTAAAACTTTTTTGTCACAGGCTGCAAATGAA GGAACTTTTGATTTTGCCTACATTGACGCTGACAAAGAGAACTATGTGAACTACCATGAGAGGCTCATAAAACTGGTGAA GGTTGGTGGGTTGCTTATATATGATAACACACTCTGGGGTGGTTGTGTTGCTTGGCCTGATGAGAAAGTTCCACCACACA GTATGCCAATGAGGAATGCAGCAATTGAATTTAATAAAACAATCACAAAAGATTCTCGCGTCGAATTCGCTCTTACTTCT GTAGGCGATGGCCTCAGTATTTGCAGGCGTGTTGCCTGA
CDS sequence (LotjaGi2g1v0230500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACACATTAAAAATCCATCAATTTACAAACAACCAGTCATACTGCAGAGCGAGGACTTAACTAAGTATATACTAGA GACTGCTGTTTACCCTCGAGAACCACAACCTCTCAAAGAGCTGAGGGATGCCACTGAGAGTCACCCTTGGGGTTTCATAG CTACTTTACCCGAAGCGGGTCCGCTAATCACCATTCTTCTGAAGCTGCTGAACCCCAAAAAGACAATTGAAGTGGGAGTG TTTACTGGATACTCTCTTCTCCTCACTGCACTCAACATTCCTGATGATGGAAAGATAACAGCCATAGACATTGACAGGAA AGCTTATGAGGTTGGATTACCAGTCATAAAAAAGGCTGGTGTGGAGCACAAGATTGATTTCATAGAATCTCCAGCTCTAC CAATTTTGGATAAACTGCTAGAAGATGCTGCAAATGAAGGAACTTTTGATTTTGCCTACATTGACGCTGACAAAGAGAAC TATGTGAACTACCATGAGAGGCTCATAAAACTGGTGAAGGTTGGTGGGTTGCTTATATATGATAACACACTCTGGGGTGG TTGTGTTGCTTGGCCTGATGAGAAAGTTCCACCACACAGTATGCCAATGAGGAATGCAGCAATTGAATTTAATAAAACAA TCACAAAAGATTCTCGCGTCGAATTCGCTCTTACTTCTGTAGGCGATGGCCTCAGTATTTGCAGGCGTGTTGCCTGA
Protein sequence (LotjaGi2g1v0230500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEHIKNPSIYKQPVILQSEDLTKYILETAVYPREPQPLKELRDATESHPWGFIATLPEAGPLITILLKLLNPKKTIEVGV FTGYSLLLTALNIPDDGKITAIDIDRKAYEVGLPVIKKAGVEHKIDFIESPALPILDKLLEDAANEGTFDFAYIDADKEN YVNYHERLIKLVKVGGLLIYDNTLWGGCVAWPDEKVPPHSMPMRNAAIEFNKTITKDSRVEFALTSVGDGLSICRRVA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 238 | 235 | 2.2E-144 | – | |
| PANTHER | 4 | 238 | 235 | 2.2E-144 | – | |
| Gene3D | 6 | 238 | 233 | 1.1E-77 | – | |
| ProSiteProfiles | 14 | 237 | 224 | 65.423 | ||
| SUPERFAMILY | 18 | 236 | 219 | 5.69E-43 | ||
| Pfam | 27 | 236 | 210 | 2.9E-79 | ||
| CDD | 76 | 180 | 105 | 1.22948E-4 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | O-methyltransferase activity | Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule. |
Expression pattern of LotjaGi2g1v0230500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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