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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0241600 |
| Transcript ID | LotjaGi2g1v0241600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Raffinose synthase family protein; TAIR: AT5G40390.1 Raffinose synthase family protein; Swiss-Prot: sp|Q9FND9|RFS5_ARATH Probable galactinol--sucrose galactosyltransferase 5; TrEMBL-Plants: tr|V7C0M6|V7C0M6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0241600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:70414256..70419432) extracted from Lotus japonicus Gifu genome v1.2.
CTTGCAATTGCTACCCTTCAACAAATATACTCCACAAATTCTTCTGAAATGTCATTACTAGAATTTTAATAATAAATACA TCATTCATACTACATTTTCAAATAAAGAAATGAAAAAATACACTAATAAAAAGTTCTCCACTCTTTTTCCTAATTAAAGA AAGAAACTTATCCGAATCAAAATTTCACAACCAACCTTCACCTCTCCTTCCTTTGGACCCCACACCATGCACGCATCCCC TATAAATTGACCACTCTTCCCTCCTTTGTTCATCAAAACAAAAACAGCAACTCTTGATTCACTTCATCATTAACACAATC ACAAACACCAAATCAAATCAAACACTTCCCTTACTACTAGCACAAATTACCAAACAAAATCTACTCATATTCTTTCATCA TTTTAGCACATCAAATCTCTATATCACTACCCTAATTTCCTCTCCTCTCCCACAATATAAACACCATTCTTCTCCTTCAT TCTCACACACAAACACTTCACAATATACAACATTCATTCACATTCAACCTTTCATTTTACCTTCAACACCAAAAAATGGC TCCCAATTTGAGCAAACAATCCCCCACCATCACCAAACACATGAATGGCTTCAACCCTTCACCCTTCACCCTTGAAGAGT CAACCCTAAAAGTCAACGGCCACGTCATCCTCTCCGATGTTCCCAAAAACATCACCACCACCCCATGCACCTACTCCTCC TCCACAACCTCCACCGGCTGCTTCCTCGGCTTCCACGCCACCAAGCCCCACAGCCGCCACGTGGCACCTCTGGGGAAACT CAAAAACATCAACTTCACCAGCCTCTTCCGGTTCAAGGTCTGGTGGACCACCCTCTGGGTCGGGTCAAACGGCCGAGACC TCGAAACCGAAACCCAGTTCCTCATGCTGAAGAATTCGGACCCTGAACCGGGTTCCGATTCGGGTTCGGGTCGACCCTAT GTTCTCTTCGTCCCCATCATCGAAGGTTCATTCAGAGCATCACTCCAAGGCTCCGGCGACGACACCGTCGAGGCCTGCGT GGAAAGCGGGTCGACCAAGGTCACCGGAGATTCCTACTCCGCCGTGGTGTACCTCCACGCCGGCGACGACCCATTTTCGC TGGTGAAAGAAGCGATGAAGGTGGTTCGGACCCATCTCGGAAGCTTCAACCTCTTGGAAGACAAGACCCCGCCGGGGATC GTCGACAAGTTCGGGTGGTGCACGTGGGACGCGTTCTACCTCACGGTGCACCCTCGCGGCGTTCTGGAAGGCGTGAAGGG GTTGGTGGAAGGTGGTTGTCCGCCGGGGATGGTGCTGCTCGACGACGGGTGGCAGTCCATTGGTCACGACTCCGACCCGG TGACGAAGGAAGGGATGAACCACACGGTGGCGGGGGAGCAAATGCCGTGCCGGTTGATAAAGTTTGAAGAGAATTACAAG TTCAGAGACTATGGAAAAGAGGGTGAGAAGAAGGGGTTGGGTGCGTTTGTGAAGGAGTTGAAGGAGGGGTTTGAGACGGT GGAGTATGTGTATGTTTGGCATGCGATGTGTGGGTATTGGGGTGGAGTGAGGCCTGGTGTGGAGGGGTTGCCGGAGGCGG TGGTGGAGACTCCTCTGTTGTCGCCGGGGTTAAAGGGGACCATGGAGGATTTGGCGGTGGATAAGATGGTGAGTCATGGG GTTGGAGTGGTCCTGCCTCAGTTTGTGGATTTGATGTATGAAGGACTTCACTCACACTTGGAAGCTTCTGGGGTTGATGG GGTCAAGGTTGATGTCATGCATGTAAGTTCTCTGTTCTCACTCTGTTTCTAACCACAACCTCTGTTTTTTTCATGCAAAA AGTCATAACCCTTATAATCAAGTTTTATTTTATTCTTTTTTTTGTGTTATTTTGTATTCACAGTAACATGTAGATAATGA TAGCTATGTTTTTGTCAAGAAATATCAAAGGGTGCATGAGTTTTTTTTACTTTTCCTCTGAAATTTATGACAAATTATAT AATTTCTTGTTTGTCATATAGTTGAAGCATTTCTTTTTGACAGATAGTTGAAGCATTTCTATTTTCAAATCTGTTAATTT TTCTATTCTGGTACATTTTTCATTGAAAGAGTATTTTGAGTGTAAAAGAAGTGTTCCATTATTTTATTATTGTGATGAGT TATGAACAATCAGTAAGCTACGTGTCACAACCAAGGGCACACATAAAGTGACCCAGTTTGTGTCATCACAGATTCACAGT TCATGTTGTAGAGCCATTGTCATCAACCATTCTTTGTTATGCAATGGGGGAGAGTTGTTTTGGTCTTTATGACTTGTTTG ACCATAACTGTTGGCACTTGGCATATTTCATTTTATTTCTTTTGGTCGGCACGTTATCTGTTTATTTTTTAATTGAAGTT TCCCCCTTTGAAAAAAATACTCCAACTCCTACTTGGTATGCAGACCAGCGATTACTTGGTTAACACCAAAGTTCCCCTTT TTGCAATTTCTGTTTTGTTTTTGAGTTTTCTTTTTTAACATTTTTTTCTTTAGAAAATAGATTATTGATATCACTTTGAA CTGGTAAGTGTTGTAGGAGTTTCAAATGTGTGAAGTGTTTTTAATTTCTATTAGTTATCTTTGATGATCTCCTTTTTTTT GTTGGGTTGTTTGCTTTATATGGATGCTTACTTATTGGACTGTTAAAACAGTTGCTAGAGCTGGTGGCTGAGAAATATGG TGGCAGAGTTGATTTGGCAAAGGCATATCACAAGGCTTTCGCAGCTTCAGTGAGGAAACATTTCAAAGGCAATGGTGTCA TTGCCAGCATGGAGCACTGCAATGATTTCATGTTGCTAGGAACTGAAACCATATCCCTTGGTCGTGTTGGTAAGGGACAA ACCAATTTTCTCACCCTAAATTAACACACAACACAAACATGTCAATTTTTTTCTTTTTGTTTTAAAAATTTCTCTGAGGG GAGCCTCGACGCAACGGTAAGGTTGTTGCCATGTGACTTTCTGGTCACATGTTTGAGCAGGGGAATTAATCTCCTGCAAT AATGCAAGGTAAGACGGTTGACATGAGATTCACAAAATGAGTCCGACCCCTCCCTGGACCTCGCATATAGCGAGAGCTTT ATAACACTAGGTTTGCCGTCTATTTGAAATATTCATGACTTAGATTGAACTACAGGTGATGATTTCTGGCCAACCTGTGA CAACAGTGGTGACCCAAATGGCACATTTTGGCTGCAAGGGTGTCACATGGTGCACTGTGCCTACAACAGTTTGTGGATGG GGAACTTCATCCACCCAGATTGGGACATGTTCCAGTCCACACACCCTTGTGCTGCTTTTCATGCTGCCTCAAGAGCCATT TCTGGTGGACCAATCTATGTCAGTGACAAAGTTGGGAGTCACAACTTTGAACTCCTCAAGACTTTGGTCTTGCCTGATGG GTGCATCCTGAGATGTGAGCACTATGCACTCCCCACTAAGGACTGTCTCTTTGCTGATCCTCTCCATGATGGCAAAACAA TGCTCAAGATATGGAACCTCAACAAGGTGAGCTTTCCCCTCCTCACATCTCATAATAATTGAATAGGTCCCAATTGTCAA TCATATGATTTTGTAATATCTATGAGGTTGGTGAGCATTATTTATCCAGGAACTGTGTCATATAGGATAAGAATCCTTTT TCTTTCTTTCTTAACAATGAAGAGACTAGGAAATTGGGATATTACTAATAGTATGTTTGAATTGACTTATTATTCCTTCT TACACTCAGAAGCTACACTGTAAAATTTACCACGTTATAAGTGAGTTGAAAGTGAATTGATTTATGTTTGTATACATTTA TGAAAAAGTGATTTTTGTTAGGTAGTATTGTGAAATTCTGTTGTAAAATCTCACAATTGATTATATTAGACGCACAAGTT ACTCTCTCTAGCTTATACTAGAATTGATTTTGTGTCTGAAATCAAGTCTCCAAAATGACTATCTAACATCAATATTTTCA TCCATAATTGATTTTAGTCTACCTACCATAATAGATTCTGGGGTTTCCTAATAGGAAACCAAACCAAACACACTCTAAGT TACTTCCAAATACATATGTGTCTATAATAGCAGAATTCTTTAAAAGCAAATTGAGTAACATTGTCAAATACTACTTGAAA AAGTGATCAGAATTTTGGGCTAGAATCTAACATTGTTGTGATTTTACTTTCTGATGCAGTACACTGGAGTTCTTGGGGTA TTTAACTGCCAAGGAGGAGGTTGGTCTCGTGAGCATAGATCCAACAAAGGTGCTGCTGAGTTTTCTCATCTGGTATCAAC CAAGATCAGCATCCAAGACATTGAGTGGAACAGTGGTAAGAACCCAATCTCCATTGAAAAAGTCCAACTTTTCGCCTTGT ATTTCAGCAAAGCAAAGAAGCTCCTCCTCTCATCACCATCCGACCGCGAAGAAATCTCATTGGAGCCATTCGATTTCGAG CTCGTAACGGTTTCCCCTGTTGTCACTGCCTCCTTGGCTTCCAAGTCTGTGCAGTTTGCTCCTGTTGGTTTGGTGAATAT GCTCAACACTGGTGGAGCAATTCAATCCTTGGATTTTGATGAGGCTCAGAATTTGGTTCAAGTTGGAGTAAGAGGCACAG GAGAGATGAGAGTGTTTTCTTCAGAGAGACCAAGTGCTTGTAGAATTGATGGGAAAGAAGCTGATTTTGAATATGAAGGT TCCATGGTCATTATTCAAGTACCTTGGCCTAGCTCTTCCAAGTTGTCATATGTTCAGTATATATTCTGAGCATGGGATTG ACTCAGATATATAATTATTATTATTATTCAGTTTTTTTTTTCATTGTGAACAATGTTAAGGGTCTTTTTTTATCCCTTAT TTGCTTTGCATGACTGATAACTTGCTTTCTAGTTTTACTCTTCACTGAGAGGGAAGCAACTGAGTTATTGGATTATTGTA TCTATGATCAAACTTCAAAGCATGTTTCTTTCTTTTTTAAATGAATGTCATTTTTTTTCTTTTTCTCTCTTTTGGGTTGA ATGGCATTTGTTTTTCAAGTGTACCTTTGTTTCTCGTTCAAACACTTTGTGCTACAAATCCTACCATGATTAGCTCCTTT GCAATTGCAACATTGAAGCAAAAAATCAGAAACTAATAGAATTTAAATTGTTACAAG
CDS sequence (LotjaGi2g1v0241600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCCCAATTTGAGCAAACAATCCCCCACCATCACCAAACACATGAATGGCTTCAACCCTTCACCCTTCACCCTTGA AGAGTCAACCCTAAAAGTCAACGGCCACGTCATCCTCTCCGATGTTCCCAAAAACATCACCACCACCCCATGCACCTACT CCTCCTCCACAACCTCCACCGGCTGCTTCCTCGGCTTCCACGCCACCAAGCCCCACAGCCGCCACGTGGCACCTCTGGGG AAACTCAAAAACATCAACTTCACCAGCCTCTTCCGGTTCAAGGTCTGGTGGACCACCCTCTGGGTCGGGTCAAACGGCCG AGACCTCGAAACCGAAACCCAGTTCCTCATGCTGAAGAATTCGGACCCTGAACCGGGTTCCGATTCGGGTTCGGGTCGAC CCTATGTTCTCTTCGTCCCCATCATCGAAGGTTCATTCAGAGCATCACTCCAAGGCTCCGGCGACGACACCGTCGAGGCC TGCGTGGAAAGCGGGTCGACCAAGGTCACCGGAGATTCCTACTCCGCCGTGGTGTACCTCCACGCCGGCGACGACCCATT TTCGCTGGTGAAAGAAGCGATGAAGGTGGTTCGGACCCATCTCGGAAGCTTCAACCTCTTGGAAGACAAGACCCCGCCGG GGATCGTCGACAAGTTCGGGTGGTGCACGTGGGACGCGTTCTACCTCACGGTGCACCCTCGCGGCGTTCTGGAAGGCGTG AAGGGGTTGGTGGAAGGTGGTTGTCCGCCGGGGATGGTGCTGCTCGACGACGGGTGGCAGTCCATTGGTCACGACTCCGA CCCGGTGACGAAGGAAGGGATGAACCACACGGTGGCGGGGGAGCAAATGCCGTGCCGGTTGATAAAGTTTGAAGAGAATT ACAAGTTCAGAGACTATGGAAAAGAGGGTGAGAAGAAGGGGTTGGGTGCGTTTGTGAAGGAGTTGAAGGAGGGGTTTGAG ACGGTGGAGTATGTGTATGTTTGGCATGCGATGTGTGGGTATTGGGGTGGAGTGAGGCCTGGTGTGGAGGGGTTGCCGGA GGCGGTGGTGGAGACTCCTCTGTTGTCGCCGGGGTTAAAGGGGACCATGGAGGATTTGGCGGTGGATAAGATGGTGAGTC ATGGGGTTGGAGTGGTCCTGCCTCAGTTTGTGGATTTGATGTATGAAGGACTTCACTCACACTTGGAAGCTTCTGGGGTT GATGGGGTCAAGGTTGATGTCATGCATTTGCTAGAGCTGGTGGCTGAGAAATATGGTGGCAGAGTTGATTTGGCAAAGGC ATATCACAAGGCTTTCGCAGCTTCAGTGAGGAAACATTTCAAAGGCAATGGTGTCATTGCCAGCATGGAGCACTGCAATG ATTTCATGTTGCTAGGAACTGAAACCATATCCCTTGGTCGTGTTGGTGATGATTTCTGGCCAACCTGTGACAACAGTGGT GACCCAAATGGCACATTTTGGCTGCAAGGGTGTCACATGGTGCACTGTGCCTACAACAGTTTGTGGATGGGGAACTTCAT CCACCCAGATTGGGACATGTTCCAGTCCACACACCCTTGTGCTGCTTTTCATGCTGCCTCAAGAGCCATTTCTGGTGGAC CAATCTATGTCAGTGACAAAGTTGGGAGTCACAACTTTGAACTCCTCAAGACTTTGGTCTTGCCTGATGGGTGCATCCTG AGATGTGAGCACTATGCACTCCCCACTAAGGACTGTCTCTTTGCTGATCCTCTCCATGATGGCAAAACAATGCTCAAGAT ATGGAACCTCAACAAGTACACTGGAGTTCTTGGGGTATTTAACTGCCAAGGAGGAGGTTGGTCTCGTGAGCATAGATCCA ACAAAGGTGCTGCTGAGTTTTCTCATCTGGTATCAACCAAGATCAGCATCCAAGACATTGAGTGGAACAGTGGTAAGAAC CCAATCTCCATTGAAAAAGTCCAACTTTTCGCCTTGTATTTCAGCAAAGCAAAGAAGCTCCTCCTCTCATCACCATCCGA CCGCGAAGAAATCTCATTGGAGCCATTCGATTTCGAGCTCGTAACGGTTTCCCCTGTTGTCACTGCCTCCTTGGCTTCCA AGTCTGTGCAGTTTGCTCCTGTTGGTTTGGTGAATATGCTCAACACTGGTGGAGCAATTCAATCCTTGGATTTTGATGAG GCTCAGAATTTGGTTCAAGTTGGAGTAAGAGGCACAGGAGAGATGAGAGTGTTTTCTTCAGAGAGACCAAGTGCTTGTAG AATTGATGGGAAAGAAGCTGATTTTGAATATGAAGGTTCCATGGTCATTATTCAAGTACCTTGGCCTAGCTCTTCCAAGT TGTCATATGTTCAGTATATATTCTGA
Protein sequence (LotjaGi2g1v0241600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPNLSKQSPTITKHMNGFNPSPFTLEESTLKVNGHVILSDVPKNITTTPCTYSSSTTSTGCFLGFHATKPHSRHVAPLG KLKNINFTSLFRFKVWWTTLWVGSNGRDLETETQFLMLKNSDPEPGSDSGSGRPYVLFVPIIEGSFRASLQGSGDDTVEA CVESGSTKVTGDSYSAVVYLHAGDDPFSLVKEAMKVVRTHLGSFNLLEDKTPPGIVDKFGWCTWDAFYLTVHPRGVLEGV KGLVEGGCPPGMVLLDDGWQSIGHDSDPVTKEGMNHTVAGEQMPCRLIKFEENYKFRDYGKEGEKKGLGAFVKELKEGFE TVEYVYVWHAMCGYWGGVRPGVEGLPEAVVETPLLSPGLKGTMEDLAVDKMVSHGVGVVLPQFVDLMYEGLHSHLEASGV DGVKVDVMHLLELVAEKYGGRVDLAKAYHKAFAASVRKHFKGNGVIASMEHCNDFMLLGTETISLGRVGDDFWPTCDNSG DPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAAFHAASRAISGGPIYVSDKVGSHNFELLKTLVLPDGCIL RCEHYALPTKDCLFADPLHDGKTMLKIWNLNKYTGVLGVFNCQGGGWSREHRSNKGAAEFSHLVSTKISIQDIEWNSGKN PISIEKVQLFALYFSKAKKLLLSSPSDREEISLEPFDFELVTVSPVVTASLASKSVQFAPVGLVNMLNTGGAIQSLDFDE AQNLVQVGVRGTGEMRVFSSERPSACRIDGKEADFEYEGSMVIIQVPWPSSSKLSYVQYIF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 781 | 781 | 0.0 | – | |
| PANTHER | 1 | 781 | 781 | 0.0 | ||
| Pfam | 25 | 765 | 741 | 0.0 | ||
| SUPERFAMILY | 213 | 560 | 348 | 2.5E-47 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0241600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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