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LotjaGi2g1v0263800.1

Overview

Field Value
Gene ID LotjaGi2g1v0263800
Transcript ID LotjaGi2g1v0263800.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description EID1-like F-box protein 2; TAIR: AT5G39360.1 EID1-like 2; Swiss-Prot: sp|Q9FLZ8|EDL2_ARATH EID1-like F-box protein 2; TrEMBL-Plants: tr|I3TAI7|I3TAI7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0263800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:73329046..73335395) extracted from Lotus japonicus Gifu genome v1.2.

GATATTTTTAAGGAACAGTAAGAACATTTGGCGCCATATGACGAAAATGACCCTTCCATTGCCCAAATGGGACGCAAGAA TTCAACATAACCAGCTTGACCAAGTTGACATCATGTGACACGTGTCAAATCCTTCATTTTCACCAGACCCTGTTTGTTTG CTTCTTACTCTCAGCTCAAATATCATCATTTCTCTCTTCCAAGTTTCTGTCTTTCTTCCATTTCCTTCTTCTTCATCGAG TGTGTGAGCTGTTCAGTGTTGTTTTTGGACCGAATTGCCCCTCCTCAGAGGTAAAAATTACTGTTTTTTTTTTGTAAATT TTGCAAGAAAGTTGGTTGCTTTCTCCTTGTATGTTGTTGATTTTGCTGTTTTCTCAGCTACCCTTTTCATTTTTTCCTTC AATTTGTAGGGTTTGGGGGGTTATGCTCAAAGTAGGTTATTTTGGGGTTAGGCAAAATCTGGGTTTGGTTTAATATCAAG TTAACATGACAAATTCTTAATTTTTATTTGGGGGTTGGTGAGGTTTGATTGGTTTTTCTTGTTTTGAGTGAAGGGTTTTC TTAAATTTCCAATTTTGAGTTGGGATTCTGTGAGATCTATTAATGGGTCATTTTGGTATGTTATAGCTAGGAATTCATGT TAACTCATGCTGTTGAGCTTTGTTGTGTGTGATGTGGCTGATAGTAGATTATGTGTGTTATTGTTGTTGGGAGGTGAAGA ATGTGAATTTCTTGTAGCTTTGAATGCTGAGTTTTTTAAGCCACATTTACTTATTTTATTTCTGTATGTCGAACTTGGGC AAGTTACTTTTTTAAGCTTGTAGATGCTTGAATTTTGAAGAGATTTAGTCTTATGTTGGTTGCAGACTATTGCTTGAACT GAAATGCATTGAATTGAACATCCTTCCCACTATGGAGTGCATCTCCTGCGTTTGACGGTTTGAGTTTCTTTGTAAGCACC ATTACCGGTATCTCTTGCGTCAATCTTTTTTATTATTGTGTCATAAATTTTTTGTTCATCCCACTGGTTACTGGTTAGGA TCTAGGAAGCTGAAATATGACATGAGAGACATGTACAAAGATTACATGGATAAGATATACAAGGACACAGGACAGGTTTG GTAACAACATATGAAGTCAGTATATAATTAACATAAAGGCACAAGTATGTAACTAAGAGAGAATCGATGTTAGAAAAATT AGTAATAGTTAATAAAATACCGTATTTTCTTTTGAATGTGTATGAAATTCAAAAAATTATAAAATGTAGCTCAGATTATC TAATGTATCCATAAATTATAAAATACCGTATTTACTCTCTGAATTCCTTTTTTTTGCTACCTATAATTTCATCATGGTAT CAGTGCGGTACCATCCTTCGTGACATGTCCTATCACTATTTTGCTGTTTCCTCAAAATTTGGAACTCTGTTATATTAATG TTATTCTCTCCCTCTCCCCAACAAGCATTTTGGTCGACCATGGTCCCTTGTCATCCTGATTTTTTGAAGTACCATGTTTT TGTTTTTATTCCTATTTTCGGGGTTCCAGGTACTATCAGCACTGACTTACCTAACGTTGTCGTTCTGAGTATCGATACCT TTTTTCTTTATCTGGTTTTTAAGGACTTCATCTGCTATCAGCACTGGTCCAATCTGTACAGTTGTTAGGAGTGGAATCTG ACATTCTAAGTTGTCTCAGAGGCTACTGGTTTGTTCACTTGGTTGACCCTCAATGTGATGTCGCTTCTATCCTTTGTTTT TAGGGTTTCAGCTGCTATGAGGGTTGGCCAACTTTTTGCTAGTGTTGAAGGTGACATCCTCATCCTCATCCATATCAAAA ACCACTGATCAGCAAATCCCCCAAGTGGCACCGCCACACAGCCTCACGCACAACCTCTAGTACAAGCTTTTGCTGTCGCT TGAGGTGCACACGCTGTCCCCGCTTCTTTTGTTGTGGTCAACGACTCCTCCAAATTCTGTCTTTCCCTATTTTGACTATG GGATATGTTGGTCGTGATATCTTGGTCGGCGTCCCCTGCTTGTTGCGGAACATAGGCAGTTGCTGGTGACTCCTATTCTC GGTTGACAGCTTGTTTGGACTTGTTGCTAGTTTCGATCGCGTGGTTAGTCCTAATTGAAGTGCTTTTAGGGTCATATTGG GTACTTTGTCTTCTCTATATCATCATTTTGTTTTGCACCTAGCTGATTTATCTCTCTATTTCAGTGTCTTTGTTTTGCTG CTATTGTTTCAGGCTTTCAGCCCTATTTTGTTTTTAGGTGTACTGTTGCTGATTGTTTTCCCTTGTTGACTGTCTACTTT AGTATAAATAAAGGCAGATGCTTTGTCTTTTTTACGATGACACCATATCAATACAGTTTTGTTCTCGATATTCCTTTTTT CACTTTCTATGCCTTAAAGACTATCCAATAATTTCATCAGTTTTGTATTGGTTTCATTGGTTGTCTTGACTTTTACTGAT TACATTGAAGTATCTAGTTAAGAAATTTGGCTTTTAGGTTGTCATACTCATATGTAAAATGTCTTAAATTATTCAATAGA AAAGTGATTATAAACTGATAATTTTCTGTGTTCTGCCAGGTGAAAGAAAATGATTCTTACAAAGCAGTACAGATGCGTAC ACTCAGCTAGCTGCCACTGCACTAAGGGGCATTTAAGTGAAGATGTGATATTCCTGGTGTTTCACCATTTGAATTGGAAC CCCAAGCTTATAGCTGCTCTGTCATGTGTGTGCAAATGGTTTGATGACCTTGCCAAGCGAGTTCTTTGGAAAGAGTTTTG TCTAACCAGGGCTCCTAAGATGATGCTTGATCTGCATTCTAGTAGGAGTCACAGTGTTGATGGGAGCTGGAGGGCCCTAG GGAAGCTGCTGATATATTGTTCTGGATGCAAGAAAGGTGGCTTATTCAACAATGTTCAGGTCCCTGGTCATTTTGTTCAT CGGACCCGATTTTCTAAAACATCAGGAAAGAGCTTTCTTTTGCCACAATGCACGAATGATATTCTATATGTGTCTGATCC TTGTGAGCATCTTGACCAAGGCGAAGAAGGAGATTTAGGATTCTTCCGTGGGATTTTCAAGTCATTCGCAACATCGAATG TTAGGAGGATGCTTATTAACAAAGGTGCCCAGCTTCATCCAACAGAAGTTTGCCCTTATTGTAAAGCCAAGTTATGGAGC ATGCTACTGGCCAATATGATCCCAAAAAGTGCTAGTTGCAGGTTGGGTTCATATGAAGAATGTGTTGAATATTACGTGTG CCTTAATGGTCACATGCTTGGGATCTGCACCCTGTTACCACTGTCTGATTCAGAAGAGGCGTCTGAGAAGGAGTAAGATA TTCATAATTTCCAGGTATTTTCTTGTATCTTGAAAATAATAACACTTCTGTTTTTGTTTCCTATTTTTTTTTGTAATTAT TTCTATATAAAGTGAAGACTAAGGATGGAATTGTGCTTTGTGGTAATTGTGGCTACTGGTTTTCATTCCAAACTGGAGCC ATTTTTTCAGTTATGTTAATACCCAACAGCTTATCCTTTTTTTTAGGTTCCTTAGTTGATTAAAATCTGTCAACTATGCT TGCAAAAGATTAATATGCTCTAACTGGATTAAGAATTTGGATACAAGATCAAACATCTTTAAAAGATTAATATGCTCTAA CTGGTGGCCAAGTATACTTGTTCACATCTTTGTGATTCCAAAGCCATTTGGATTGTGCTAAAGATGAGAGCTTTGGATAG CTCGCAATCTTAGATTTGAACTATGTGCTGTCGTTGTAGCAGTTAAACTTTCATTTTTGCATTGTTTTAATTGAAAGATA TGAACATTTTAAGTAAGCATGACGAGTAGGTGCACAAAAGATAGACACTTAATATTTTGAGAGGAATTTCACATGTACTG GTGAAGAAAATTCCCAATTAGCTAGGAGAATAGGAAGTAGCATGCTTTTTCCCCTCTTGTTGTAGTAGCTGTTGGCCTTT TTTTATGATTGCTTATATTATTTGACCACAATTCTATAACCTACTTTATCATTTGAAATTGTGACAATGTGACATTTCCT TGGACAGATTGGCATTCAGTCTTCACATGAAGTTTAGTTGAACACATTGCTAGCATGCGCATGGGTAAAAATTTGTGCTT AGCAGCAGCTGAAATCTAAACCATTATGCTTGATATTGATGTCTCAACCCATGACAGCATTTTTTACCTAGGACAATATT TTACAACATTTTTTCTTAATGAATCTGATAGAGATTGTAACTGTAAACTTTGTTATACCATGTAACCATTTATATTGATG TCTGGATGTGTACCTGGGTGACAGATTTGGTCGTACAATAATTCATACTTGTTAAGAACCATTTTGATTTAGTTGTAGGT TCTTAGATTCATTTGAAGAGCACTATGCACTCAACTCTCCTATATACACACACTTGAGTAGAGAGTAAAAGTGAAGGAGA AGGAGAAGGAGAAGAAGGAGGAGGAGGATTTGAATCCATTTTTTCCGTTTATTGATGTGATCTTTGTTACGCTGTTATAT GCCTAAATTGAAGGCTTGAGAAGCATTCTTTCAGCCCCCCTATTCTTTGGGATCTGATCACTTTGACTAGTTAATATGAT GAGCGACAAGTGAATATGACACTTCTAAAATATAAAGATATAAATTAATAGATATTATTTACAAACTTAATTTTATTGAT AAAAATTACCATAATGGTAATACAAATAAATGAAATAAACAGTACTTTTTTTTGTTTACAAATGGAAGATGAAGTAAAGA GTATATCACACTTAAGTATTTATGTTGAAATTTATTTATTTTTTATTTATCATGGATACAATATAATACTCTCTATTCCA TTGAGTTGACTTCCCTACAAATATGCCTCCAAAGGATACAAGGGTGAATCTTGTATGTGACATCCTTTGGCAAACCCTTC ATTCAATGTTAACTCTATAAAAGCCCTTGGATTTGGCAAGCATTACTCTATGAATGATGCCCCATCATTTAGCTTGAAGA ACCAAAAAAACCAGCAATGAAACACCTCTGAGGACCCCTCTACAAAGCTGTGTTATTGCTTCTAGGAACGCTCGTGAATT CTTATTAGCATTTGTGAGCAGTGAGCATGGCTTCTAGAGTTAAGATGAAAGGAAGTAAGACTACAGAGGAGGTGAATAGA GAGCATGAAGTAGAAGAAGAAGAGAGCCCTGTGAAGCAAGTGGAACACACAGTGCCGAAAACTGATGACTCTAGTTTCGA CACTCTTACATTCAGAATGTGGTTTCTGGGGTTTGTTTCTTGTGTGTTGCTTTCCTTAACTGAGCCTTTGTCAGTACTCT CAATTTCTGTCCAGATTGCTGTGGTTCCAATTGGTCATTTCATGGCCAGGACATTGCCCACTCGCGTGTTTTTCCAGGGC TCGCGCTTAGAATTCTCGCTCAATAGAGGGCCATTTAATATCAAGGAGCATTTTCTAATAACCGTCTTTGCAAATTCTGG TGCTAGAATTGTCTACCCTACGCATTTTTTGACTCTAGTACTGGTTGAAGCGCTACAATTTTGTTATTTCCGGTGGTGGT CTTAATGCTGGAACTGCCTTTATGACAGTTTTTCTGTTTCTTACTCTGGGAACTAATGGCATTAGTCTTAGCTGGTAGGG TCGTAGGGAAATAATAATGTAGACGGGTTCCCCTTGCCTCGTTGTCCTACTGCAAAGGGGAATAACATGGTGGTCTTTTA ATCAAAGCTTCAGCTGCAACGGGATCATTCGCAAGCATTTGTTGCTAGTTTTCAAGTTGTTTGTGACTTAAAGAGTGATG TTTGAAGAAGGTGTATGAATAGGTTTTTTTCTAGTTTGTTTGCTTTAATTTGGGTATTCTTTTTTAGGTTTGAGTACTCT TTTTCCTTACCTAGGGTTTTTCTAAGGAAGGTTTTAATGAGACTTATTCTTAAGAAATTGAGTTCATATAGTTTTGTCAT GACTATTTGTTAGGATTTTTGGATTGGAAATGCCTATCCATGAGAAGGTTTGTTCTCATGTATTATTCCTTTCAATAATA TATATATATATATATATATTATTTATATATATATATATATTTAGTTTTCGAAAAAAAACTCTCTCTATTCCATATTATTA GTCATGTATTTTCCGTTGTAACAAAAAAAAAAATATTTTTAGTCATGTTTTCTAAAAAAAACATTATCCCAAAATGTAAG CAACTGTCCAATATATATGAACATTAATTCATACTTGTTAAGAACCATTTTGATTTAGTTGCAGGTTCTTAGATTCATTT GAAGAGCACTATGCACTCAACTCTCCTATA 

CDS sequence (LotjaGi2g1v0263800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATTCTTACAAAGCAGTACAGATGCGTACACTCAGCTAGCTGCCACTGCACTAAGGGGCATTTAAGTGAAGATGTGAT ATTCCTGGTGTTTCACCATTTGAATTGGAACCCCAAGCTTATAGCTGCTCTGTCATGTGTGTGCAAATGGTTTGATGACC TTGCCAAGCGAGTTCTTTGGAAAGAGTTTTGTCTAACCAGGGCTCCTAAGATGATGCTTGATCTGCATTCTAGTAGGAGT CACAGTGTTGATGGGAGCTGGAGGGCCCTAGGGAAGCTGCTGATATATTGTTCTGGATGCAAGAAAGGTGGCTTATTCAA CAATGTTCAGGTCCCTGGTCATTTTGTTCATCGGACCCGATTTTCTAAAACATCAGGAAAGAGCTTTCTTTTGCCACAAT GCACGAATGATATTCTATATGTGTCTGATCCTTGTGAGCATCTTGACCAAGGCGAAGAAGGAGATTTAGGATTCTTCCGT GGGATTTTCAAGTCATTCGCAACATCGAATGTTAGGAGGATGCTTATTAACAAAGGTGCCCAGCTTCATCCAACAGAAGT TTGCCCTTATTGTAAAGCCAAGTTATGGAGCATGCTACTGGCCAATATGATCCCAAAAAGTGCTAGTTGCAGGTTGGGTT CATATGAAGAATGTGTTGAATATTACGTGTGCCTTAATGGTCACATGCTTGGGATCTGCACCCTGTTACCACTGTCTGAT TCAGAAGAGGCGTCTGAGAAGGAGTAA 

Protein sequence (LotjaGi2g1v0263800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MILTKQYRCVHSASCHCTKGHLSEDVIFLVFHHLNWNPKLIAALSCVCKWFDDLAKRVLWKEFCLTRAPKMMLDLHSSRS HSVDGSWRALGKLLIYCSGCKKGGLFNNVQVPGHFVHRTRFSKTSGKSFLLPQCTNDILYVSDPCEHLDQGEEGDLGFFR GIFKSFATSNVRRMLINKGAQLHPTEVCPYCKAKLWSMLLANMIPKSASCRLGSYEECVEYYVCLNGHMLGICTLLPLSD SEEASEKE 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 247 247 2.9E-155
PANTHER 1 247 247 2.9E-155
SUPERFAMILY 14 88 75 1.3E-7

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0263800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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