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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0263800 |
| Transcript ID | LotjaGi2g1v0263800.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | EID1-like F-box protein 2; TAIR: AT5G39360.1 EID1-like 2; Swiss-Prot: sp|Q9FLZ8|EDL2_ARATH EID1-like F-box protein 2; TrEMBL-Plants: tr|I3TAI7|I3TAI7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0263800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:73329266..73333574) extracted from Lotus japonicus Gifu genome v1.2.
TTTCCTTCTTCTTCATCGAGTGTGTGAGCTGTTCAGTGTTGTTTTTGGACCGAATTGCCCCTCCTCAGAGGTAAAAATTA CTGTTTTTTTTTTGTAAATTTTGCAAGAAAGTTGGTTGCTTTCTCCTTGTATGTTGTTGATTTTGCTGTTTTCTCAGCTA CCCTTTTCATTTTTTCCTTCAATTTGTAGGGTTTGGGGGGTTATGCTCAAAGTAGGTTATTTTGGGGTTAGGCAAAATCT GGGTTTGGTTTAATATCAAGTTAACATGACAAATTCTTAATTTTTATTTGGGGGTTGGTGAGGTTTGATTGGTTTTTCTT GTTTTGAGTGAAGGGTTTTCTTAAATTTCCAATTTTGAGTTGGGATTCTGTGAGATCTATTAATGGGTCATTTTGGTATG TTATAGCTAGGAATTCATGTTAACTCATGCTGTTGAGCTTTGTTGTGTGTGATGTGGCTGATAGTAGATTATGTGTGTTA TTGTTGTTGGGAGGTGAAGAATGTGAATTTCTTGTAGCTTTGAATGCTGAGTTTTTTAAGCCACATTTACTTATTTTATT TCTGTATGTCGAACTTGGGCAAGTTACTTTTTTAAGCTTGTAGATGCTTGAATTTTGAAGAGATTTAGTCTTATGTTGGT TGCAGACTATTGCTTGAACTGAAATGCATTGAATTGAACATCCTTCCCACTATGGAGTGCATCTCCTGCGTTTGACGGTT TGAGTTTCTTTGTAAGCACCATTACCGGTATCTCTTGCGTCAATCTTTTTTATTATTGTGTCATAAATTTTTTGTTCATC CCACTGGTTACTGGTTAGGATCTAGGAAGCTGAAATATGACATGAGAGACATGTACAAAGATTACATGGATAAGATATAC AAGGACACAGGACAGGTTTGGTAACAACATATGAAGTCAGTATATAATTAACATAAAGGCACAAGTATGTAACTAAGAGA GAATCGATGTTAGAAAAATTAGTAATAGTTAATAAAATACCGTATTTTCTTTTGAATGTGTATGAAATTCAAAAAATTAT AAAATGTAGCTCAGATTATCTAATGTATCCATAAATTATAAAATACCGTATTTACTCTCTGAATTCCTTTTTTTTGCTAC CTATAATTTCATCATGGTATCAGTGCGGTACCATCCTTCGTGACATGTCCTATCACTATTTTGCTGTTTCCTCAAAATTT GGAACTCTGTTATATTAATGTTATTCTCTCCCTCTCCCCAACAAGCATTTTGGTCGACCATGGTCCCTTGTCATCCTGAT TTTTTGAAGTACCATGTTTTTGTTTTTATTCCTATTTTCGGGGTTCCAGGTACTATCAGCACTGACTTACCTAACGTTGT CGTTCTGAGTATCGATACCTTTTTTCTTTATCTGGTTTTTAAGGACTTCATCTGCTATCAGCACTGGTCCAATCTGTACA GTTGTTAGGAGTGGAATCTGACATTCTAAGTTGTCTCAGAGGCTACTGGTTTGTTCACTTGGTTGACCCTCAATGTGATG TCGCTTCTATCCTTTGTTTTTAGGGTTTCAGCTGCTATGAGGGTTGGCCAACTTTTTGCTAGTGTTGAAGGTGACATCCT CATCCTCATCCATATCAAAAACCACTGATCAGCAAATCCCCCAAGTGGCACCGCCACACAGCCTCACGCACAACCTCTAG TACAAGCTTTTGCTGTCGCTTGAGGTGCACACGCTGTCCCCGCTTCTTTTGTTGTGGTCAACGACTCCTCCAAATTCTGT CTTTCCCTATTTTGACTATGGGATATGTTGGTCGTGATATCTTGGTCGGCGTCCCCTGCTTGTTGCGGAACATAGGCAGT TGCTGGTGACTCCTATTCTCGGTTGACAGCTTGTTTGGACTTGTTGCTAGTTTCGATCGCGTGGTTAGTCCTAATTGAAG TGCTTTTAGGGTCATATTGGGTACTTTGTCTTCTCTATATCATCATTTTGTTTTGCACCTAGCTGATTTATCTCTCTATT TCAGTGTCTTTGTTTTGCTGCTATTGTTTCAGGCTTTCAGCCCTATTTTGTTTTTAGGTGTACTGTTGCTGATTGTTTTC CCTTGTTGACTGTCTACTTTAGTATAAATAAAGGCAGATGCTTTGTCTTTTTTACGATGACACCATATCAATACAGTTTT GTTCTCGATATTCCTTTTTTCACTTTCTATGCCTTAAAGACTATCCAATAATTTCATCAGTTTTGTATTGGTTTCATTGG TTGTCTTGACTTTTACTGATTACATTGAAGTATCTAGTTAAGAAATTTGGCTTTTAGGTTGTCATACTCATATGTAAAAT GTCTTAAATTATTCAATAGAAAAGTGATTATAAACTGATAATTTTCTGTGTTCTGCCAGGTGAAAGAAAATGATTCTTAC AAAGCAGTACAGATGCGTACACTCAGCTAGCTGCCACTGCACTAAGGGGCATTTAAGTGAAGATGTGATATTCCTGGTGT TTCACCATTTGAATTGGAACCCCAAGCTTATAGCTGCTCTGTCATGTGTGTGCAAATGGTTTGATGACCTTGCCAAGCGA GTTCTTTGGAAAGAGTTTTGTCTAACCAGGGCTCCTAAGATGATGCTTGATCTGCATTCTAGTAGGAGTCACAGTGTTGA TGGGAGCTGGAGGGCCCTAGGGAAGCTGCTGATATATTGTTCTGGATGCAAGAAAGGTGGCTTATTCAACAATGTTCAGG TCCCTGGTCATTTTGTTCATCGGACCCGATTTTCTAAAACATCAGGAAAGAGCTTTCTTTTGCCACAATGCACGAATGAT ATTCTATATGTGTCTGATCCTTGTGAGCATCTTGACCAAGGCGAAGAAGGAGATTTAGGATTCTTCCGTGGGATTTTCAA GTCATTCGCAACATCGAATGTTAGGAGGATGCTTATTAACAAAGGTGCCCAGCTTCATCCAACAGAAGTTTGCCCTTATT GTAAAGCCAAGTTATGGAGCATGCTACTGGCCAATATGATCCCAAAAAGTGCTAGTTGCAGGTTGGGTTCATATGAAGAA TGTGTTGAATATTACGTGTGCCTTAATGGTCACATGCTTGGGATCTGCACCCTGTTACCACTGTCTGATTCAGAAGAGGC GTCTGAGAAGGAGTAAGATATTCATAATTTCCAGGTATTTTCTTGTATCTTGAAAATAATAACACTTCTGTTTTTGTTTC CTATTTTTTTTTGTAATTATTTCTATATAAAGTGAAGACTAAGGATGGAATTGTGCTTTGTGGTAATTGTGGCTACTGGT TTTCATTCCAAACTGGAGCCATTTTTTCAGTTATGTTAATACCCAACAGCTTATCCTTTTTTTTAGGTTCCTTAGTTGAT TAAAATCTGTCAACTATGCTTGCAAAAGATTAATATGCTCTAACTGGATTAAGAATTTGGATACAAGATCAAACATCTTT AAAAGATTAATATGCTCTAACTGGTGGCCAAGTATACTTGTTCACATCTTTGTGATTCCAAAGCCATTTGGATTGTGCTA AAGATGAGAGCTTTGGATAGCTCGCAATCTTAGATTTGAACTATGTGCTGTCGTTGTAGCAGTTAAACTTTCATTTTTGC ATTGTTTTAATTGAAAGATATGAACATTTTAAGTAAGCATGACGAGTAGGTGCACAAAAGATAGACACTTAATATTTTGA GAGGAATTTCACATGTACTGGTGAAGAAAATTCCCAATTAGCTAGGAGAATAGGAAGTAGCATGCTTTTTCCCCTCTTGT TGTAGTAGCTGTTGGCCTTTTTTTATGATTGCTTATATTATTTGACCACAATTCTATAACCTACTTTATCATTTGAAATT GTGACAATGTGACATTTCCTTGGACAGATTGGCATTCAGTCTTCACATGAAGTTTAGTTGAACACATTGCTAGCATGCGC ATGGGTAAAAATTTGTGCTTAGCAGCAGCTGAAATCTAAACCATTATGCTTGATATTGATGTCTCAACCCATGACAGCAT TTTTTACCTAGGACAATATTTTACAACATTTTTTCTTAATGAATCTGATAGAGATTGTAACTGTAAACTTTGTTATACCA TGTAACCATTTATATTGATGTCTGGATGTGTACCTGGGTGACAGATTTGGTCGTACAATAATTCATACTTGTTAAGAACC ATTTTGATTTAGTTGTAGGTTCTTAGATTCATTTGAAGAGCACTATGCACTCAACTCTCCTATATACACACACTTGAGTA GAGAGTAAAAGTGAAGGAGAAGGAGAAGGAGAAGAAGGAGGAGGAGGATTTGAATCCATTTTTTCCGTT
CDS sequence (LotjaGi2g1v0263800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTCTTACAAAGCAGTACAGATGCGTACACTCAGCTAGCTGCCACTGCACTAAGGGGCATTTAAGTGAAGATGTGAT ATTCCTGGTGTTTCACCATTTGAATTGGAACCCCAAGCTTATAGCTGCTCTGTCATGTGTGTGCAAATGGTTTGATGACC TTGCCAAGCGAGTTCTTTGGAAAGAGTTTTGTCTAACCAGGGCTCCTAAGATGATGCTTGATCTGCATTCTAGTAGGAGT CACAGTGTTGATGGGAGCTGGAGGGCCCTAGGGAAGCTGCTGATATATTGTTCTGGATGCAAGAAAGGTGGCTTATTCAA CAATGTTCAGGTCCCTGGTCATTTTGTTCATCGGACCCGATTTTCTAAAACATCAGGAAAGAGCTTTCTTTTGCCACAAT GCACGAATGATATTCTATATGTGTCTGATCCTTGTGAGCATCTTGACCAAGGCGAAGAAGGAGATTTAGGATTCTTCCGT GGGATTTTCAAGTCATTCGCAACATCGAATGTTAGGAGGATGCTTATTAACAAAGGTGCCCAGCTTCATCCAACAGAAGT TTGCCCTTATTGTAAAGCCAAGTTATGGAGCATGCTACTGGCCAATATGATCCCAAAAAGTGCTAGTTGCAGGTTGGGTT CATATGAAGAATGTGTTGAATATTACGTGTGCCTTAATGGTCACATGCTTGGGATCTGCACCCTGTTACCACTGTCTGAT TCAGAAGAGGCGTCTGAGAAGGAGTAA
Protein sequence (LotjaGi2g1v0263800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MILTKQYRCVHSASCHCTKGHLSEDVIFLVFHHLNWNPKLIAALSCVCKWFDDLAKRVLWKEFCLTRAPKMMLDLHSSRS HSVDGSWRALGKLLIYCSGCKKGGLFNNVQVPGHFVHRTRFSKTSGKSFLLPQCTNDILYVSDPCEHLDQGEEGDLGFFR GIFKSFATSNVRRMLINKGAQLHPTEVCPYCKAKLWSMLLANMIPKSASCRLGSYEECVEYYVCLNGHMLGICTLLPLSD SEEASEKE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 247 | 247 | 2.9E-155 | – | |
| PANTHER | 1 | 247 | 247 | 2.9E-155 | ||
| SUPERFAMILY | 14 | 88 | 75 | 1.3E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0263800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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