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LotjaGi2g1v0265200.1

Overview

Field Value
Gene ID LotjaGi2g1v0265200
Transcript ID LotjaGi2g1v0265200.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description TPX2 (Targeting protein for Xklp2) family protein; TAIR: AT5G15510.1 TPX2 (targeting protein for Xklp2) protein family; Swiss-Prot: sp|F4I2H7|TPX2_ARATH Protein TPX2; TrEMBL-Plants: tr|I3SY38|I3SY38_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0265200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:73469918..73477041) extracted from Lotus japonicus Gifu genome v1.2.

ATTTAATAAGACTAATTGATATTTAAAGATAATAAATATTTTTTTGAAGAGAATATAATAATTATTTAACGACCAATCTG ATAGTAACGGCCTATTGATCAACTACTACACAACATTGAAGTTTCTCTTGTAAATTTATGACAGTCAAACAGTAATGAAT GAATTGCAGTACAAACAAACGCAAAATGTATTGCCTCCATCTCCCCATATATTACACTCATTTATCATTTATGCCAACCT ACTACCATGGGAAAGTAAAAAGTGACAAGCAAAAATGTCAGAAAAGTAATAACAATAACAATAAATTGAATCAAACTGAA TGCCTCAATTTTTGACTGTAAATGCAGTGCATTTTTGGAAACTTCTACAATCGTTTCTGAAGCCAGAATCAGTTCTTGGG AGAAGTATCTGTGAATAGCTTCAAAAATTTAGAATTGATTATGATGAAAGAGAATTTGATCCAAACTGTCATATTTTTAG GCCACAGCAGGCATGTCTTTGAGCCATGCATCCAGAGGCTTACCAATTGAGTACACAATGAATCCAATCTCACGCAGCTT ATCTGCATCCACAACATTCCTTCCATCAAACAAAAATGCTGGTTTTCTCATATTATCATATATCCTCTGATAATCAAGGC TCTTGAACTCATCCCACTCAGTCAGAACACAAACCCCATCTGCATCCTTTGTTGCCTCATAAGCATCCCAAACCACATTC ACATTCTTCTCAGTTGTGGGGCTTGTTGGCTGCAAGTGAATAGGGTGGTCCCAATCAAACTTGTTCATCCATAAATCCCT TTGAATTTGGTCCTCAGTTACCTGTGGATCATAGATGCTCAACCTTGCTTTGTCACCAAGTAACCCCTTGCACACATCAA TTGCTGGCGTTTCTCTTGTATCTCCAGTGTCCTTCTTGAATGCAAATCCCAAAATTGCAATTTTTTTGGTTGCCACTGTG TTGAACATGGACGATACCACCCGGTTCACGAATCGAGCCTTCTGATAATCATTGATCTTGATGACCTGTTTCCAGTACTC TGCAACCTCTGGAAGGCCATTGCACTCACAGATGTAAACAAGGTTCAAGATATCTTTTTGGAAGCAGGATCCACCAAATC CAACACTGGCATTCAAGAACTTCGGTCCAATTCTTGTGTCAGTACCGACAGCATAGGCCACCTGTTTGACGTTTGCCCCG GTAGCCTCACAAAGCGCTGACATTGCATTGACAGATGAGATCCTCTGTGCCAAGAAGGCATTAGCAGCAAGCTTAGACAA TTCAGCAGACCAAAGGTTTGTGGTTAGGATTCTCCCCTCAGGAACCCATTGGGAATAAACACTTTTCAATGTTTGAATTG CTTTCTGGCCTTCTGGGGTCTCCCTGCCTCCGATGAGAACGCGGTCCGGGTTGAAAAGATCTTGGATGGCAGTTCCCTCA GCCAGGAATTCCGGGTTTGACAGGATCTGGAATTTGATGCCCTTGCTGTTGTGGGTCAGAATTTTCTCTATAGCCTCAGC AGTTTTGACAGGGACAGTGGATTTCTCCACCACAATTTTGTCTGACTTGGAAACATCAGCAATCATGCGAGCTGCGCTCT CCCAATACGTCAAATCCGCTGCTTTGCCGGCTCCAAGACCGCGAGTTTTTGTCGGGGTGTTGACAGAGACAAACACTATG TCAGCCTCGAAGACATGTTTTTCAACCTCAGTGCTGAAGAAGAGGTTCTTGCCGCGGCATTGCTTCACCACATCATCAAG GCCTGGCTCATAGATAGGAAGCTGGTCACTGTTCCAGGCTGCAATGCGGGATTTGGAGATGTCAACAACAGCAACTTCTA TAGATGGACATTTCAGTGCAATGACTGCCATTGTAGGACCCCCCACATATCCAGCACCAATGCAGCAAATCTTCACCATT TTACTTTTCTAAAGAACCTGAACATATCAATTGAAGGGGTCCATGTGAATCATTAAATACAATTACACAACAAAAGCCAA TTCAAAATCTTCTAAATCAATCAATTGCTTCATAGTACTAATGCTGCATAGTGCATACTAGTATCATGTTTTGGATCAAC TTCTCTTTTCTCATAATCAATTCGGAAACCCAGAAGCTAGTCACAAAAAAATTCTCTAGAATTGATTCCGATTTAAGAAT CAATCGTAGAAAGATCTTCAAACATGTACTAAAGGAAAAAGAAAAACAATTCACAGTAATATTGATCTGAAAGTGACATG GCATTGGTGAAATAGGAATTAACTCATTTTCTTCCAAAGTCACATGGTAAGTACATCAAAAGGATAAAAGGCTAAGAAGA ATCCAGATTTAACACATGTATTCAGGTTTTGATGATAAACGTATACATGACTACAATTTGACTGCTAAGAGACCAATCTC AACAAAGTATTGTCAATAGATCTAGCACTAAGTGGAGAAACACCTAATTACAGTACTAGATCCAATGCCAAAGAGCTTCA AAGCAATTAAAACCCAAGATAACACTGAACCAAAGATAAAAGTGATTAAGTGAACAACCTTACTATACCAGGAAGGGAAA ATTAGCTATAAATCTACACAGACACAAATCAGAATCAAACCCACCCATCAACAAGAATTAACTGCACTAATCAACAAATA AAAAAACTAATCTAACTCCCAATGATCTAGCTCATAACATGATACCAGAGTAGAAAAGATTCAAAATATTGAATAAAAGA CACCAAATCAATCAGGAAATGGGGTGTTACCTGCGGAGATGAGTGATCTGTTTGACTAAGAAAGAAATTAAGGAAGGAGG TATGAGAGGGAGAGAGCGAGAGAGAAGGGTCTGTGTACAAAGAGCCTGAGACAAAGGTTAATATATACCTGAAGCAGATC AAGATTTTGTAACTGTTATTACCAAAATGGACAAACTTTTCTTAGTGAAAGCGATGCGTTTGGTGAAGAGAGGCTTTCCT TTTCTTTGGATTCAGCTCAGGTGGCTCTTTCTTTTCTAGAGTGAAAGTGAAGCAAAACAAAATTGAGAATGGGATCAAAT GTGAACTTACTCAAGTGCCCATGGCCATGAACTCTGAGCTCACTGCAACTCAAACATTAATTAATGAGTAACATCTTGGC ACGTTTCCACGTGTTTGTTGCAGGAGACACAACATGCTCTGTGTCTCAGTGTCTGTGTCAAGTTCAAGCACATTGTCAAC GTCACCACTCACCAATCACCATCCCCTTCCTCCCACTACTAATATTCTCGTTCTTGCTAAGTTATTACAGAATTGAATAT CAAGCACCAAGAAGTTATTTTAAAATGTATGATAATTAATATGTGAATGAGACTTACATAAAAAATCTTTTGTACATGCT TGTCATTCGTTTAGTCTCCTTAGTTGCAAGTGGTAACTAGCTATGCCATGACCACATGACCTAACAGATTAACCATGATT CTAACTATTTAAACAGAATAATTTAATTAGCTTGTTTGATTAATGGTAACATGACTTCCTCTTTTTTTGTTACATAGGAA AAACATGGCTTCCTCTTAATTGATCTGAAGTTAACTCATTGCATTTGAGCCATAATTAATCATTTGGGTCAGTTTAATGG CTTTTGGGCCAGTTAGTTGAATCTCAACCCAGAACAAAGATACAATATATAATGAGTATAGACATATATAATAATATAAA TAAGACTTTCATGAAACATTACATTTTTGAATATTTTATTGTGCTTCTTCGATTTTGTCCTTCTTTTCAATTTTCAATCT ATATTCCACTTTATCTTTAGAATCAACAATACAAAAATACCCTTTAGGAAAAATGCTCTTCCTCTAACTTCTAAACTAAA AGTTTCACTCACAAGATCCAACACAGTTGATATATAGTTAAACTCCTTAAATATTTAGCCTTGAGTTCGATCCTTGAGTT GTTTATATGGGGAATGATTTGTTCGCAGATACCTACTCACTTACTATGATATCAAAGCATCGAAATAATTAATCTCATTA CTACCGATTGTGCGGATACATTGGTAAAAGAAAAAGTTGCCCCAAATTAAATCCCCTGTAAAACTTCAAATTTTTAAAAA AGAAGAAGAAGAAAGAAAGCTTATAAAAAAATAAAGAAAGGAAAGTCTTGAATGAAAATTTCCTATATAGTAGGCCTAGA CGTAGTGGCAATTGAACTATTGAATGATTTGAATCAATTGGAGGTTCGATCATCACATATTGTAATCAGTTATTTTACCG TTTAATGCGAACACATGTGACGAATGAATTGGATTCACTAAAAACAATAAACAATTTAGCCCAATCCATGATAATATAAG GATCCAACACCAAAATGGAAACAGAATTTCAAATTAACAAGTCTATAAAAACCCTGCATTGAAACCAAAAGTAGCCGTTA CACCAAAGAGCCTCCCTCTCCACACAAAACAAAAACTCCCTATTTCCCCTTCGTTTCATTCCAATTCGTATTCATTCACC AATCCAATTTCATTTCCGGCGAGAATCCAACACTGGCGGCGGCGGCGGAAGAAGTAACAATGATTCACCAGAAAGGTGAG AATCTGAACCCTAACGTGAGAAGTCCTCACGGTAGCAGCGAAGTTCCAAAACCCTCACACTCCCCTGCTACTGTGAAGCC TTCAATTGTTGTCGTTTCGCCTCAGAGGAGGATCCGGCAGCGGAAATTCGTGGTGGCGAAGAAGAAGAACAACAAACCGG ATTCAGCCGCGGCGGCGGTTACGTGTGACAAGTGCGTTTGTGTGGCGTATCAGAATCTTAGGGTTTCGCAGGAGGAGTTT TTCAGAGGGAAGAATTGCGATGAAATTGAAGGTGGAGAAGTAGAAGAGGAAGCTGAGGTTGCGCTTGAAGAGGAAATTGA AGCGAAATTGATGATCCATGACCTTGAATTTGATGAAAGGAAAACAGTGGATGATGATGAAGAAGAGGGGTGTGCATTGG AGGGTAGTGCTATGGTCAAACGTACGAGGGAGAGGGTTATGGAAGAGGCGAGGAATAGTGGTCCAGAAAATGGGTCTGGG AGGGTGATGCATTTGGTGAAGGCGTTTGAGAAGCTTCTCTCTATAAGGAAGCAAGGTTGTGATGAAGAGAATGGTGAAAA GAGCAAGGTGATGAAATGGGCATTGCCAGGAATGCAATTGCCACAGGTTCCTGATAAGGCACCTGAAGAAACAACTGAGG TTTCTGGTTCAGGTCCTGAGTCGTTTTGCTGCCCATCTGAGTTGGTTTTGACATCCCAGAACCTTGGCTTGGATAATAGG ATTTCAGTTTCTTCTTCTTTGGAGAGTGGTCGTGGAAGGTTCAAATTTGATGTCTATATACATTTTTCTTGTATTGTGTG TCATTTTCTTCATTTTCTTGCTGTGTTGATGTGTATGAATTGTTGTTTTTGTTCATGCTGCAGTGTATCTAGCAGGACTT CATCTAGGGGTAGAAGAAGCAGGAGAAATGTGAGATTTTAGATGTTATAATTGTTATATTCAATTAGTACTAATGAAGAA TGATTAATGATTCACTGATGAAGTTTTGAATTTTGATGAATTGTGTTTCAGAGCTTGGAATCATCAGGGACTGTTGGAGG GAGGAGGTGGAAGAAGAAGCAGCAGCTAAGAGTCACTAGCCAGAAACCATTCAAACTGAGAACAGAGGTAGTTAATTGAT CACAAATAATTGTTTGTTTTTTAAAGGTTCAATTTAAAGGTTTAATTGATGGTAACATTGGCAATGCAATGGAAATGCTA CTATAGCAAAGGGGAAAGATGAAAGAGGAAGAATTTATGAAGAAAGTGCATGAGATGTTCACACAAGAAGAGAGGCAGAG GGTACCTGTTGCTCAGGGTCTTCCATGGACAACAGATGAACCTGAGGTGAGGACATTTTCTCATGCAAGTCCTTGGTTTG AGCCTTTGAGGTGTATCTGAGACTCTCAGTGCAAAACACAAATTATCATTCAAATTTGGTCTCATGCTTGCTAATTGTAT TTGTTTACTTAGCTTAATAGTGTTATTTTGGTGATACTGTTCACAGTGCTTGGTGAAACCTCCAGTTAAAGAAAGCACAA GACCTATTGACCTGAAGCTTCATAGTGATTTGCGCGCAATTGATCGTGCAGAATTTGATCATCAGGTGCCACTTTCATCT ATTTCCTCCCTTAGTTTCTCTTTTTCCTCTTTGTTTTTACATCATAAAGTGCAACTGCTGAATTCAATTATGTTCCTGCT GTTCTATCTTTCATTTGAGGATGTACAAAACTGTAGAAAATGAACAAAATTTGATGAGTTTAAATTGTACAGGTGGCAGA AAAAATGAGCTTACTAGAACTACAGAAAATGGAAAGGGAAAGACAACAGAAGGTACACTATCTACTAATAGCCTAATACT GTATTTCTATTGTGTGTCTTCTGAGTGAATCCTGAATTGGGTTAGCTTGTTTCCTTTTATCTCTTATAGTTGGAAGAAGA GGAAGAGATCAGAAGATTGAGGAAGGAACTGATTCCAAAAGCACAACCAATGCCTTATTTTGATAGACCTTTTATTCCAA GGAGGTAATAAAATAATCTTGGATATAAATTATAATCTTCTTTTAACAATTTTTTTGGCATTTTCTTTGTCTTTTCCTTT GTTCTCTTTAGAATGTCTCTCTCATTATTATGTTACTTTTTTTTTCCAAAGGTCAATGAAGCATCCAACTATACCTAGAG AACCCAAGTTTCACATACCCCATCATAAGAAGCTCAAGTGCTACTCGCCATGGAATGAAATGAACCCTTACTCTTCTTCC TACCTCAACTAAGCTTCCAAAGTTCATTTGCTGATGTGAAGTGAAGTGAATGTGGCATTTTTCAATTTTGTATATGGGGC AACCAATATATAGTTGCAAATTTTTTTTTTGCCTTGGGTCAATTAACGGTGCAATAATCTCTGTACTGGCAAACGTTACA GATGGACTTGGACACATGTGCGGAGGAGGGTATCTTCTTTTCATATAAATGAAACGAATTACTTTTCTTTTTTTGGTTGT GTAGTAATTCTGCTCAGACTCACATTTTCTACAACCATTTATACAAACTAGTCCAAAATAGAGGTAAATAAGAGAAATGA GAGA 

CDS sequence (LotjaGi2g1v0265200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATTCACCAGAAAGGTGAGAATCTGAACCCTAACGTGAGAAGTCCTCACGGTAGCAGCGAAGTTCCAAAACCCTCACA CTCCCCTGCTACTGTGAAGCCTTCAATTGTTGTCGTTTCGCCTCAGAGGAGGATCCGGCAGCGGAAATTCGTGGTGGCGA AGAAGAAGAACAACAAACCGGATTCAGCCGCGGCGGCGGTTACGTGTGACAAGTGCGTTTGTGTGGCGTATCAGAATCTT AGGGTTTCGCAGGAGGAGTTTTTCAGAGGGAAGAATTGCGATGAAATTGAAGGTGGAGAAGTAGAAGAGGAAGCTGAGGT TGCGCTTGAAGAGGAAATTGAAGCGAAATTGATGATCCATGACCTTGAATTTGATGAAAGGAAAACAGTGGATGATGATG AAGAAGAGGGGTGTGCATTGGAGGGTAGTGCTATGGTCAAACGTACGAGGGAGAGGGTTATGGAAGAGGCGAGGAATAGT GGTCCAGAAAATGGGTCTGGGAGGGTGATGCATTTGGTGAAGGCGTTTGAGAAGCTTCTCTCTATAAGGAAGCAAGGTTG TGATGAAGAGAATGGTGAAAAGAGCAAGGTGATGAAATGGGCATTGCCAGGAATGCAATTGCCACAGGTTCCTGATAAGG CACCTGAAGAAACAACTGAGGTTTCTGGTTCAGGTCCTGAGTCGTTTTGCTGCCCATCTGAGTTGGTTTTGACATCCCAG AACCTTGGCTTGGATAATAGGATTTCAGTTTCTTCTTCTTTGGAGAGTGGTCGTGGAAGTGTATCTAGCAGGACTTCATC TAGGGGTAGAAGAAGCAGGAGAAATAGCTTGGAATCATCAGGGACTGTTGGAGGGAGGAGGTGGAAGAAGAAGCAGCAGC TAAGAGTCACTAGCCAGAAACCATTCAAACTGAGAACAGAGCAAAGGGGAAAGATGAAAGAGGAAGAATTTATGAAGAAA GTGCATGAGATGTTCACACAAGAAGAGAGGCAGAGGGTACCTGTTGCTCAGGGTCTTCCATGGACAACAGATGAACCTGA GTGCTTGGTGAAACCTCCAGTTAAAGAAAGCACAAGACCTATTGACCTGAAGCTTCATAGTGATTTGCGCGCAATTGATC GTGCAGAATTTGATCATCAGGTGGCAGAAAAAATGAGCTTACTAGAACTACAGAAAATGGAAAGGGAAAGACAACAGAAG TTGGAAGAAGAGGAAGAGATCAGAAGATTGAGGAAGGAACTGATTCCAAAAGCACAACCAATGCCTTATTTTGATAGACC TTTTATTCCAAGGAGGTCAATGAAGCATCCAACTATACCTAGAGAACCCAAGTTTCACATACCCCATCATAAGAAGCTCA AGTGCTACTCGCCATGGAATGAAATGAACCCTTACTCTTCTTCCTACCTCAACTAA 

Protein sequence (LotjaGi2g1v0265200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MIHQKGENLNPNVRSPHGSSEVPKPSHSPATVKPSIVVVSPQRRIRQRKFVVAKKKNNKPDSAAAAVTCDKCVCVAYQNL RVSQEEFFRGKNCDEIEGGEVEEEAEVALEEEIEAKLMIHDLEFDERKTVDDDEEEGCALEGSAMVKRTRERVMEEARNS GPENGSGRVMHLVKAFEKLLSIRKQGCDEENGEKSKVMKWALPGMQLPQVPDKAPEETTEVSGSGPESFCCPSELVLTSQ NLGLDNRISVSSSLESGRGSVSSRTSSRGRRSRRNSLESSGTVGGRRWKKKQQLRVTSQKPFKLRTEQRGKMKEEEFMKK VHEMFTQEERQRVPVAQGLPWTTDEPECLVKPPVKESTRPIDLKLHSDLRAIDRAEFDHQVAEKMSLLELQKMERERQQK LEEEEEIRRLRKELIPKAQPMPYFDRPFIPRRSMKHPTIPREPKFHIPHHKKLKCYSPWNEMNPYSSSYLN 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 36 36 -
PANTHER 4 463 460 8.3E-183
PANTHER 4 463 460 8.3E-183
MobiDBLite 8 26 19 -
MobiDBLite 207 227 21 -
MobiDBLite 251 301 51 -
MobiDBLite 251 266 16 -
Pfam 365 421 57 1.8E-20
Coils 387 413 27 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Cellular component Spindle The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.
Cellular component Microtubule Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
Biological process Activation of protein kinase activity Any process that initiates the activity of an inactive protein kinase.
Biological process Regulation of mitotic spindle organization Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle.

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0265200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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