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LotjaGi2g1v0266900.1

Overview

Field Value
Gene ID LotjaGi2g1v0266900
Transcript ID LotjaGi2g1v0266900.1
Lotus japonicus genome version Gifu v1.2
Description Longifolia protein; TAIR: AT1G74160.1 LONGIFOLIA protein; Swiss-Prot: sp|Q9LF24|LNG1_ARATH Protein LONGIFOLIA 1; TrEMBL-Plants: tr|A0A151R2S6|A0A151R2S6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0266900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:73663598..73669964) extracted from Lotus japonicus Gifu genome v1.2.

TCCACATGCTCCTGGAGAGAGGTCCAAGCCAGAGACCCACCCATGTTGTTCTGTCTAATAGAAGTGCTAGGAAATGACCA TAGCAGATCTGAGTCATTTACCCTAACCCCACACATGTATTCAGACACACCTATCCCTTTCTTTCCCTTTCCTCCTCTCC TCCTTTTTGCAAAGTATTTATATTCAGTAAGGATACCTAGGCACCCAAATTGTATTGACACTGTAGTACTGTACAAACAT CTTATTTTTTTCTTTAGCTCTTTTTTTTCTCACATAACATTACATATTACATCTATTCCGTCTCTCATTTCTTTTTTTTT TTCTTATTCTGAGTGTCCACGGTATGCAGATGCCCACAACTCATTAGTCATTTATATTTATATTTTAACAACTCATATCC CTCTCATTCATACAGTTTTTGACACCCAAAATTCCACCCATCTTTCCCTCTCTCTTACGTAATGTTATTAAAAAGTTCTC TGTCTCCATAGACTTATTTATTCTTTGAAGCCTCATTTTCAACTTTGCCTTCTTCATATATAAATAATACACTGTATCCT TTCACACACTTCAGCCTCTATATATGCATCTGCAAAGTAGAACAAAAGATAAAAGTATTCCCCTATTCACAAAATTAAAA CATCTCTTCTTGGGTCAATCAAATTTCTCTGTAGTTTGTGCATTACCAGTGGTGCTTTGGAATTGCTTCATTTTCACTTC TTTTTGTTCCTTCTGCTTTTGCAGGAGATAAGATATTCTCTCCTCTGTTATGTGCAATCCCAACATCCAATTTAATGTAA TTTTCTGTTTTCTATCTCTTTCTTATCATTTTGGTTCTGTTCATGATCATGAACATTCTCTTCTGTTAACACATGCATAC ACATGTAACACAACACAAGCAACTCATGTGAAATTTTGATCAAGTCTTTATCTGGTTTTGTGCAAGTTGTATTCAATGCA CTATTGGTATCTTCTTTAGAAACTTCTAACAGTGAAGGTCTATTCCTCTTTCTGAATCCTTGACATTTCAAATTCATTTT ACCTACATTAAGAAAGCAGATTTTTTTCTTCTGCAATTTGTGTGAGAGAGAAACAAGGAGAATGGAAGTTGCTTAGTTGA GGCATTGTGGACTCTGGAAAGTTGAAAGGGAGCAAACAAACAAAGAAAATGTCCAAAAAGGTTTTGACACCCATGAAGGA TGAAAGTCCAGATTTTCAGAAGCAGATTGGGTGCATCAGTGGATTTTTTCAACTGTTTGACCGCCACCGGTTCATCACAG GGCAACGCAGTAGCAGCCAGAGTCATAGCATTCCAACACAAGGTAATCTGTAGTAGCTGTTTCTCTATGCATTTTTATGG TGATTCTTTTTGTAATCACTTTTACATTTGGAATATCAAACCATGGTTTGGACTTTGGATAAATATTAACAAGGAAAAAC TCCTGTAACATGTAACAAAAATGGACATTAAATTTTCCAAACACAAGACTAAATATGCACTTAGATAGAAACATTTTTAA ACAAACACAATAAATAGAGAAAAAATTGATTGGCATACATGTCAAGTTTAAAACTGCTTTCTTTCAACAGTAGGGACAGA CACAATCAACTTGTCAGTAATGTACTATAGCATAGTTTTCTCTTCTTTCTTCTTCAGTTTTTTTAATTATTATTATTAGT TTTTGGTAAGATGAGAGCAGTGGTAACTGGTAAATGTTGTTTTACTTCAGGTAGTTATAAAATAAACCAAAGCTTCTTAT AAATTGGCTCCAAATTAAATCATGGCAGTCTTTTGCAAATTAAATTTCTGGATTCAAGAAACTTTAAAGAAGTGGCATAG ATGCAATTTTTTCTTGTTAATTTGAGTTTGTACCTTATGAGTCGCCTTCAAATATTTGCTTTCCCTTGCTTAATGCACAT TGGAAGCTTGAATTTGCTATATTTTCCGAAGAATCCCAGAATCTATACATTCCCAAGTGCCCAGTGGCGCAAGGTTCTGC AGAAAATAATAATATTATCATGCAAAACATTTGCAGATAAAAAAAACACAAGTAAAAAATTTCAAGTTTTGAACAGTCCA TAAGTACTTAAAGTCTTAAACAATTTCATATGTCATAAACATCCGTATTTGTGTGAAAGAGGAAACTGATAACGCCTTTA TGCAACTGAAACCCTTTGATATAGAGAACTTCACGTTTAAACATAATGCATTTAAATTAAATGTATCAAGTTATCAACAA GTTGTTATTTCAAGTGGTACATGCATGATTCCTTAAAAGTGAGATCTCAAACTAGAGTATGTGTGTGGAAAATACTCCTG ATGAGAGAGCTAGGCAGCTAGCATCACCATTCACCATGCTGTATGCTACTGGTTTGGACAGAATTCTCTTCTATAAAAAA TGTCTATGGTTAGACCAGAAAAAGTTAGACTTATCAAGCTAATAAATTAGTAATAAATCATTACAACATCACTATTTAAT GACATGCCAACAATTTTTTAATCTACATTCAACTTGAATGTACTAAGTTTATGCAACTAGTTTCCAATAGTTTTATCAAT CTCCTTGTTTAGAAGGAATTTAAATAGAAGAATGAATGCCTGGTTGAGGTTAAAGTTTTTGCAAGACAATTCAAAGTACT TCCTATTAAATTTTCTTTCCTTTCTCAGGTGGAACCAGGAAGCACATCAAAGAACTGAATAATACAGCACAAAAGTCAAC GGTAAGATAAGTATAACGCGATATTTCAAATCATTAGAGAAATTTAGCAGAACCAGTTAAGAATGTGAGAGTATGATTGC AGGCAAAGAATGTGAAGGCTGCAAAAGAGAATCAACCATTCTCCACAGAATCATCAGGGACTTCAATGTCTTCATCATCT TGTTCATCTAGCATGTCATCAATGGACTTTAGCAGAACAATTCAGATGGAACCGCCATCAACCAGTCAAATCAAAATCCC AGAAAACTTCAATTCAGGAGCACAAAGGAAGCAGCAACCTAGCCCCCGAAGACCTCAGTCGCTTGATTGCTATGACATTG TCAAAGACTCAATGCATAAAGATGCGCAAGGATTGTCAGTAAAAACTGTAGCTAAAGGGGAAAAGAAGGGTCGAATCTTG AGACACATTGACTCTCCCCGGCCTTTGCAGGCTCCAATATCTGTCAAAACAGGAGCTATGGTTGCTTGGGATTCACCACG ACTCTCATACGATGGGAGGGATGTACAAGATACATTCAAATCTGCTACAAAGCACAAGGAACTCCCTAGGCTTTCCCTGG ACAGCAGAAAAGGATCCATCAAAAGTTTCAATGAAGGAACAAAATCTCGCAACTTTCTGAAGGCTCCAGAGAAAGAGTAT GGGGGCGCCAGCGCAATGCATAAGCAGCTACAAGAACCAGAAACTTCTAAAAGACCATCTAGTGTTGTAGCAAAGTTAAT GGGACTGGAATCTTTCCCAGACTGTGCCCAAACTTGTGATACTCCACGGGGGATCTCTAGTTGCACTACCAACAAAGTTG AGATGTCTGCAGGATCTAGCACGAATGATGAATTCAAGCAGCCCCAAAGTTCAGCATCCCCAAGGACAAGCAAGGGGTCT AACTTGCTTCCGTCTACTAGGGATGCTTCAATCATGATTGTGAAACCATATGCACAATTTTCTCAGGAAGCAACTCCATT GAGACAAGCTGATGCAAGCCAAGGTTCACAGTTGCAGATTTCCAAGAGAAATGACTGTTCAACAAAAGCAACAAACGCAT CCCTCTCTGTATACGGGCAAATTGAGAAAAGGGTGGCAGATCTAGAGTTCAAAAAATCTGGAAAGGATCTCAGAGCCCTT AAACAGATTCTTGAAGCGATGCAGAGATATAAAGAATCAATAGATATAACGAGTGATCAGGCTTCGAATTCTCCATCTGA CAATAGGAATGATAGTAATCTCAGAGTAAGTTTGAAAGTGCAAAGCCCAAGAATACAACAGAAGGACTCAACATCGGCCA CTGTTGAGATTTCAAATTCAACCCAGGGTAGTAAATCGCCAATTGTCATCGTGAAACCAGCAAAAGTTGCAAGAAAAACC AATGATTCTGCTTTCACAGAAATGAGAAGTCATGGTAAATCAGGTCTCAGTAAGTTTGGTCCTGGTAATCCCAGAAATAG AATATTGGTTGACAAGCTTGACATGCAAACAACAAAAGATAGTCCAGCAATGAGACATGTCAATCATCCTACTAGTCAAC CTTTTCATGCCGCAGATAAGAGTAACAAGATGAGGACATCAAGACTGATGCAATCATCAAAAGTTCCTCGAGTCATTAAT GGAGAAAGCAACACTACCTCCACCAGTATATCAGAGAACAGGAGCCCAAGAGTACAGAAGAAAATTGGTTTGGAGAGGCG TTCTCCAGCAACCAGCCCATCATCAGATTCCAGCAGTAACAGAAGACAACACAATAGGCATTCAACGGAATTGTCTTCCG CTAGTGTTATACCCAGACAAAAATTCTCTACTTTGCAGGAAAGAAATGAACTTCTCAGCGAGATCACCTATCAAAGGATG GGTTTTAAGCATGGAGTCGATGTTATTTTGCCAGATTTTGGCAGCAAGAGAAGCATGGGTTCTCACAGTGATATAGAAGA CATTCACAATGATCACCCTGAAAAGATCAATAGTAACTCCATCCAGCAAAAAGGCCTAAGTCAAAATGTAAGTATTTTCA CAATAATTGGATCCTTGCATCTAATAATCTAAATCATTTGGTTTAACATTCTTTCATTGATCAGAATGCAGAAAACGAGC TGAGCCAGGAAAACTTGATAGCTGAAAAAATAGTAACTGCAGAACAACCTAGTCCAGTGTCTGTTCTTGATGCTGCATTC TATAAAGAAGACCCCCCTTCTCCAATCAAAAGGAAATTGGAAATCTCAAAAGATTTAGGTATATTGCACTCTTCTTTTCT AAGTAAGCAACATAGATTGAATGACAAATTAGTCTGAAATCATCTTCAAATGAATCACTGCACCAAATACACTTTTTGTG CCATTCACAAAAATCATCACGGAAAGGAGCTTGAATTGCATTTTGATTCTCTTCAAACTTATACAGATGAAGCTCTGAAC ACTTATGATATTGATGAGGAGAACTCAGAAGATTTTCCTCTTTCATCCAACACCACAAAAGCCAACTTCAGCAATGGAAC CAGGGACATTGACTTTAAAACTCATAATTTGGTTCAAGTTATTCAACAAATTGACTACAGTGATGAGAGATTCACCAATT TCAGTGACAGTAAAGATCCTGAACACAAATATGTATCAGAAATACTGTTAGCATCAGGGCTTCTCACTAGTCCCAGCTCT AGCCAGGCATTTTATTCATCAGGTTACCCAATAAACCCAACGGTGTTCCTTGCACTAGAGCAAATCCAGACAGGCAAGAA ACATTTCAATGTTGAACACGGTGCCAAGAAGATTGTTAAGATGAATAATCCACAGCAAATGCAAAGGAAGCTCATATTTG ATGTCATTAATGAGATTCTAGTTCAAAAGCTAATATTGGAGAGTTCCACTCTGTGGTGCCAGCCAAACCAACCAGCAGGA AGAAAACTAAAAGGAAAGCAACTTTTGGATGATCTTTGCACCAAAATTGACAAGTTACAACATAAAAATAGGAATCTCAA CCTGGCTCATGAGGATGAGAAATTGACAAGTCTTCTGTGGGAAGATTTAACACAACAGCCCACAACTTGTGCAGAATGCT TCAGTGAGATACCAAATGTCGTGTTGGATATCGAGAGGTTGATCTTCAAAGATTTAATTACAGAAGCTGTGAGAGGTTAA GTAGCTAACCATTCTGGTAAGCATTACAGGAAACCGCAGCTTCCAAGTAGGAATTCTAGCTAAGCAGGCTAAGAAGAAAC TTCCAGCCTTAATCTGTCAACTTACTAGTCTTCCCACGCTTATACTTAGAAGGGGTAATAAGCTAATTAGTTAACATTTT AAACTTCATTTCTTTATAATGTCTGTCATCATCTTTCTTGCATGTATTTATCGTGTATGTTGATAAAATACATGTAGAGA TGCAGATAAATGTATATATCATTGACATGATCTTTTTAAGCTCAAATAAAGATGTCTTGTATGTATCAAAAGAAGATTCC CTTTTCTGTGTCAACAGTCATATTCATATTGTTGCAAGCCATTTGAAAAAAGTTAATACTCCAAAGGTCTCATCTCTGTC TGAGATCTCAGGAATTATATCTCACAGATTTTAATGCCCAAGAATAGCATAAACTATAAAGGTATAAGTTCTCAAACCAA AAAAAGACAAAAAAAAGTAACAAGTTCAGGAAAACATGAAGTGTTCT 

CDS sequence (LotjaGi2g1v0266900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCCAAAAAGGTTTTGACACCCATGAAGGATGAAAGTCCAGATTTTCAGAAGCAGATTGGGTGCATCAGTGGATTTTT TCAACTGTTTGACCGCCACCGGTTCATCACAGGGCAACGCAGTAGCAGCCAGAGTCATAGCATTCCAACACAAGGTGGAA CCAGGAAGCACATCAAAGAACTGAATAATACAGCACAAAAGTCAACGGCAAAGAATGTGAAGGCTGCAAAAGAGAATCAA CCATTCTCCACAGAATCATCAGGGACTTCAATGTCTTCATCATCTTGTTCATCTAGCATGTCATCAATGGACTTTAGCAG AACAATTCAGATGGAACCGCCATCAACCAGTCAAATCAAAATCCCAGAAAACTTCAATTCAGGAGCACAAAGGAAGCAGC AACCTAGCCCCCGAAGACCTCAGTCGCTTGATTGCTATGACATTGTCAAAGACTCAATGCATAAAGATGCGCAAGGATTG TCAGTAAAAACTGTAGCTAAAGGGGAAAAGAAGGGTCGAATCTTGAGACACATTGACTCTCCCCGGCCTTTGCAGGCTCC AATATCTGTCAAAACAGGAGCTATGGTTGCTTGGGATTCACCACGACTCTCATACGATGGGAGGGATGTACAAGATACAT TCAAATCTGCTACAAAGCACAAGGAACTCCCTAGGCTTTCCCTGGACAGCAGAAAAGGATCCATCAAAAGTTTCAATGAA GGAACAAAATCTCGCAACTTTCTGAAGGCTCCAGAGAAAGAGTATGGGGGCGCCAGCGCAATGCATAAGCAGCTACAAGA ACCAGAAACTTCTAAAAGACCATCTAGTGTTGTAGCAAAGTTAATGGGACTGGAATCTTTCCCAGACTGTGCCCAAACTT GTGATACTCCACGGGGGATCTCTAGTTGCACTACCAACAAAGTTGAGATGTCTGCAGGATCTAGCACGAATGATGAATTC AAGCAGCCCCAAAGTTCAGCATCCCCAAGGACAAGCAAGGGGTCTAACTTGCTTCCGTCTACTAGGGATGCTTCAATCAT GATTGTGAAACCATATGCACAATTTTCTCAGGAAGCAACTCCATTGAGACAAGCTGATGCAAGCCAAGGTTCACAGTTGC AGATTTCCAAGAGAAATGACTGTTCAACAAAAGCAACAAACGCATCCCTCTCTGTATACGGGCAAATTGAGAAAAGGGTG GCAGATCTAGAGTTCAAAAAATCTGGAAAGGATCTCAGAGCCCTTAAACAGATTCTTGAAGCGATGCAGAGATATAAAGA ATCAATAGATATAACGAGTGATCAGGCTTCGAATTCTCCATCTGACAATAGGAATGATAGTAATCTCAGAGTAAGTTTGA AAGTGCAAAGCCCAAGAATACAACAGAAGGACTCAACATCGGCCACTGTTGAGATTTCAAATTCAACCCAGGGTAGTAAA TCGCCAATTGTCATCGTGAAACCAGCAAAAGTTGCAAGAAAAACCAATGATTCTGCTTTCACAGAAATGAGAAGTCATGG TAAATCAGGTCTCAGTAAGTTTGGTCCTGGTAATCCCAGAAATAGAATATTGGTTGACAAGCTTGACATGCAAACAACAA AAGATAGTCCAGCAATGAGACATGTCAATCATCCTACTAGTCAACCTTTTCATGCCGCAGATAAGAGTAACAAGATGAGG ACATCAAGACTGATGCAATCATCAAAAGTTCCTCGAGTCATTAATGGAGAAAGCAACACTACCTCCACCAGTATATCAGA GAACAGGAGCCCAAGAGTACAGAAGAAAATTGGTTTGGAGAGGCGTTCTCCAGCAACCAGCCCATCATCAGATTCCAGCA GTAACAGAAGACAACACAATAGGCATTCAACGGAATTGTCTTCCGCTAGTGTTATACCCAGACAAAAATTCTCTACTTTG CAGGAAAGAAATGAACTTCTCAGCGAGATCACCTATCAAAGGATGGGTTTTAAGCATGGAGTCGATGTTATTTTGCCAGA TTTTGGCAGCAAGAGAAGCATGGGTTCTCACAGTGATATAGAAGACATTCACAATGATCACCCTGAAAAGATCAATAGTA ACTCCATCCAGCAAAAAGGCCTAAGTCAAAATAATGCAGAAAACGAGCTGAGCCAGGAAAACTTGATAGCTGAAAAAATA GTAACTGCAGAACAACCTAGTCCAGTGTCTGTTCTTGATGCTGCATTCTATAAAGAAGACCCCCCTTCTCCAATCAAAAG GAAATTGGAAATCTCAAAAGATTTAGATGAAGCTCTGAACACTTATGATATTGATGAGGAGAACTCAGAAGATTTTCCTC TTTCATCCAACACCACAAAAGCCAACTTCAGCAATGGAACCAGGGACATTGACTTTAAAACTCATAATTTGGTTCAAGTT ATTCAACAAATTGACTACAGTGATGAGAGATTCACCAATTTCAGTGACAGTAAAGATCCTGAACACAAATATGTATCAGA AATACTGTTAGCATCAGGGCTTCTCACTAGTCCCAGCTCTAGCCAGGCATTTTATTCATCAGGTTACCCAATAAACCCAA CGGTGTTCCTTGCACTAGAGCAAATCCAGACAGGCAAGAAACATTTCAATGTTGAACACGGTGCCAAGAAGATTGTTAAG ATGAATAATCCACAGCAAATGCAAAGGAAGCTCATATTTGATGTCATTAATGAGATTCTAGTTCAAAAGCTAATATTGGA GAGTTCCACTCTGTGGTGCCAGCCAAACCAACCAGCAGGAAGAAAACTAAAAGGAAAGCAACTTTTGGATGATCTTTGCA CCAAAATTGACAAGTTACAACATAAAAATAGGAATCTCAACCTGGCTCATGAGGATGAGAAATTGACAAGTCTTCTGTGG GAAGATTTAACACAACAGCCCACAACTTGTGCAGAATGCTTCAGTGAGATACCAAATGTCGTGTTGGATATCGAGAGGTT GATCTTCAAAGATTTAATTACAGAAGCTGTGAGAGGTTAA 

Protein sequence (LotjaGi2g1v0266900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSKKVLTPMKDESPDFQKQIGCISGFFQLFDRHRFITGQRSSSQSHSIPTQGGTRKHIKELNNTAQKSTAKNVKAAKENQ PFSTESSGTSMSSSSCSSSMSSMDFSRTIQMEPPSTSQIKIPENFNSGAQRKQQPSPRRPQSLDCYDIVKDSMHKDAQGL SVKTVAKGEKKGRILRHIDSPRPLQAPISVKTGAMVAWDSPRLSYDGRDVQDTFKSATKHKELPRLSLDSRKGSIKSFNE GTKSRNFLKAPEKEYGGASAMHKQLQEPETSKRPSSVVAKLMGLESFPDCAQTCDTPRGISSCTTNKVEMSAGSSTNDEF KQPQSSASPRTSKGSNLLPSTRDASIMIVKPYAQFSQEATPLRQADASQGSQLQISKRNDCSTKATNASLSVYGQIEKRV ADLEFKKSGKDLRALKQILEAMQRYKESIDITSDQASNSPSDNRNDSNLRVSLKVQSPRIQQKDSTSATVEISNSTQGSK SPIVIVKPAKVARKTNDSAFTEMRSHGKSGLSKFGPGNPRNRILVDKLDMQTTKDSPAMRHVNHPTSQPFHAADKSNKMR TSRLMQSSKVPRVINGESNTTSTSISENRSPRVQKKIGLERRSPATSPSSDSSSNRRQHNRHSTELSSASVIPRQKFSTL QERNELLSEITYQRMGFKHGVDVILPDFGSKRSMGSHSDIEDIHNDHPEKINSNSIQQKGLSQNNAENELSQENLIAEKI VTAEQPSPVSVLDAAFYKEDPPSPIKRKLEISKDLDEALNTYDIDEENSEDFPLSSNTTKANFSNGTRDIDFKTHNLVQV IQQIDYSDERFTNFSDSKDPEHKYVSEILLASGLLTSPSSSQAFYSSGYPINPTVFLALEQIQTGKKHFNVEHGAKKIVK MNNPQQMQRKLIFDVINEILVQKLILESSTLWCQPNQPAGRKLKGKQLLDDLCTKIDKLQHKNRNLNLAHEDEKLTSLLW EDLTQQPTTCAECFSEIPNVVLDIERLIFKDLITEAVRG 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 998 998 0.0
PANTHER 1 998 998 0.0
MobiDBLite 38 57 20 -
Coils 58 78 21 -
MobiDBLite 64 105 42 -
MobiDBLite 255 275 21 -
MobiDBLite 309 339 31 -
MobiDBLite 360 380 21 -
MobiDBLite 456 478 23 -
MobiDBLite 501 522 22 -
MobiDBLite 534 636 103 -
MobiDBLite 536 591 56 -
Pfam 821 995 175 8.8E-33
Coils 929 956 28 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Regulation of monopolar cell growth Any process that modulates the frequency, rate or extent of monopolar cell growth, polarized growth from one end of a cell.

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0266900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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