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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0278500 |
| Transcript ID | LotjaGi2g1v0278500.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heavy metal transport/detoxification superfamily protein, putative; TAIR: AT1G68585.1 hypothetical protein; Swiss-Prot: sp|B1HNE3|ACCD1_LYSSC Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta 1; TrEMBL-Plants: tr|A0A151UBE6|A0A151UBE6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0278500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:75016302..75022458) extracted from Lotus japonicus Gifu genome v1.2.
CGAGGACCTACTGTGGTGGATGTGGATCCAATGCTAGTAGCCTTCATCTTTGACTCTTCCTATTTGTTAAAACCTTGTAG TCTTGTACACATCACTACTACAACTTGTACAAGTTCAGCTTGGCTCGCTTCTATGAAGCTGAGCCAAGCCAAGACCCTCC TTAAACATCATTAGTGAAGTTGATTCATTGAATTAGCTTAATGCCTGGTTTAGGAAGCAAACTATGAAGGAATAATTCCT GTGAAGAAAAGAACAACTAAGCTAGCACTATGTGGGGCTGTTTCTGCACGAACAATCTTTGTCAACTTAGGCATACAACC TTTTTCACTTTACTATGCTGTGCCATCATGTTCAGGTCCTTTTTCACTTTACTACACAATTGAGATGGGGTTGCTCTATC AGTGTAGAAGGAGCTGTTTGTAGATCATTTTCTGCACATTTCTCTCTTTACAGGATGGGATTGAAGCTGACAAACCTATT AAATTTATATAAAGGATCTTTATGGTAGGCTGCACACATATCACAGGTATGGCTTTTGAAGATGGTGCCAAAAAGGAGAT TCAGGAAGTTGGTAGAAAAATCTCTATTGGGTCTAGTCTAGCATCTATGGAGTCTTTGTCCATGCCACTGGTCTGTCTTT TTGCTTACTCTATTTTGAGTTTTGGCCATGGAATTCTAGAATTTCTTGCCTAATGATTTGGTTCTGGCATTCTGCGCTGT AAAAGCAGGTTCAGGAGGTTGTTCTTTCTGCAGACATGCAATGTGAGAAGTGCCAGAAGAGGGTTACTGATATTATTACA AAAATGAATGGTAAGTTTATTTGCTAAATTCTCTTCATTTGGAAATTTGGAATGCTACTTTGTAAGATTTTTGGGAGAAC ACATTTGTAGATTAGCTTGCTGCAGATATTTGCCAATTCTATTGATTATTGATTTGAAGTTTTCTATAATTTCCTAGAAA GAACAGGATCACTAGAAGCATATTTCGTTCCACAATGAAATACTCTAAAATCATTTTTGCTCATACGAGATCTTCTGAGC ATGCGTGTGTTGGATTCTGCTCTGCATATTGTGAAACCAAACATGCTATAAAGCTCAATATTCTCACCTTCTTTAATTCC CAGAAATAGGACACCATAGAAGACACAAATATATATTTAGAGAGAGAGAGAGGAAAAGCACACGTCATAAGAGGTGGTCC TTGTTGGTTTCTACCTAGAAATAGCTTAGCATATGTTATGGCAGGAAGTGTGAGGAAACTGTTAATTTAGAAAACTTGTA TTCTTATTATTCTACTTCAGTTTAATAAACCAGCCTTTGTAATTTTCTGTTCTTGGTTTCAACGGCTTGTCTTCATCTTC TTAATGATGGTTGTTTTAAAGTATAGATCGAGTTGGTAGAACTTAGTTGATTGAATAAATTTGTGTTTGGAAATAGTAAT GTAAAATTTAAGCTGAAAAAGACAATTTATGTCTAGAGAGTGACAGAGAATTATTTTTTGGTTAGTTGATATTTGGAAAT TTTTTTACAATTGATTCTAAAGCCAAAAATAATTCTCAGGAGAACTTTTGTGAGTAGCTTATGGGGTGTCAGAAAGAATT CTGAAAAAAGAGAAGTTGATGTGATCATGCTATGGTAATAGAAGGAAAAGTAAAAAAGTTTTCATTTCTATTAGATGTAA GCAAAGTTATTTACAGATTTACTTTTAACTAGAACAGCTGAACTTGCACTCTGTGGCTTACACCTATGAGCCATAAAGCC ACTTATATATGAAGACACAGAAAAGAACAAAGCCGTTATGAGCTTTTATTATTTGTCAAACATGCTTTACCAAGATATAA AATATTCATTCACAATAAAATAAAATAAGCATTGTTCTCATTGTATTTTACCTTAAGCTTGCTGGTTTGATTACTTAGAT TAGCACGATTATAGAGCCTGAGTTTTATACTTAGGACCTATTCAGTTTAAGCATGTTAATGATGTTTTCTATTTTGATGA ATTTTGAGATGAAATTTTGATGGCACTTTCTCTTGTTATTGCTAACTCTTAATACCTGCTTCAATGTTTTGATTCTTCAG TAGAGACAGAGTCTGTGGTGGTGAATGTGTTGGAGAAGCAAGTGACACTCACTTTTAGATTTCCAACTGTTGGTGAAGTA ATCAGTAAGCAAATTACTCGCATCAACAGGAATCCCCTCCCTAAAAAAGTGGCCATTATCAAAAGGATATTTCGCTCTTC CAAAGGATCCACATGTGCACAATGATATTTTGTAGATTAATTTGGCAGTGTACAGAAGAAAGATTCTATATTCATGATTG GATTTGATTTGTGATTGCCTAACTAATTTGCCACAGAAGAAAGTTTCTGTATACATGATTGAACTTGATTTGTAGTTGTT TCATGAATTTGATTCGCTGACACACACATAGAGACAATAGGAGAAGGATTTTATTGATTTATGTTTAAATAAATTTTGTC TCTCTAGTGGATCTGTGGATGGAATCTGGGCCACTGCACAACAGTGCCATTCATCCCCCCTTTCTCATTTGTAGATGCTA TGTTGGGTTGGGAATAAGTTAAGGCCAATTTAGATTTTGTGTAAAAAGTTATGACCTACTTAAAAATTTGAAGGCCTTAA CACGACATATTACGCGTTTCAAACTCTTGAAAGGCTGGTCTGACTTAGTAGTTTATTTAACCGCACATGTTAACATGTTT AATAAAAGAATCTTTTATATGCAAATAAACCTATTTTCATATTGGGTTTCTTCGAAACTGATATAGGCTAGGTCATAAGT CCCTACTAGCGGTCTCTAATCTTTCCCACCCCTAATGATCATGCCACTTTATTCATGTTTTGTGTAGATTATAATTTCAA AAAAGTTCTTCACTTTGTCGTATACATTTGGACCATAATATTCAATCTGTTTAGATGTAAACCAAATAATATTTATTGAA GTTTATCTAGTAGAAAAATTCCAATTAGCTCTAATTAGTCGGTATCCAAAGAAGCAACAGAATTAGAGTTTTGAGATTGT TCCCTTGATGCTGTTTATATAAACATTCTATATGAACTTTGAAAATAAAGAAAAAGATGCTTTACAGTTTTCAGTGTTGC TTTTCAGCAATGCAAACCATGACATGAAGAGATGCTTCCCCTTGCCATGCTGTTTTCAAATAAATTAAGCATTAAGGTGA AGTTAAGGATAAAAAGGACCAAGACAAAAAACTACCTCTTAGCCTAGTCCAGCTCCGAGTAGAATCAGATTCCAAAATGA AGGGAGACATAGTATCTTACTTGTTTTAGACAACACAAAAATTATAAATACAAGTTGATCCATTACCAAGAACATTCATA TTCTCTGACCCCCACAAATTTCCTTTTTCCTATGCCTTTTGGCTTTTTTCCAAAAGTAGAACCAATCCTGGGTGCCGCCA CTTCCAACCCCATGTCCGAACAGGCAAGTTTTTTTGTTCTATTCCCACAAATACACTTCCTTTTCACGGATCAACATCTT CTGTCTCATTTCCTGTTTAATTTTTCTGTCATAACACTGAAACTTTGACATGCTATATATAAAAAACATGCGTGAGCCGG TTACAAACTTACAATTGTACTTTGTGATTGATATGATGAACATTTATTGGTGAGACAGGAAAACGAGACGCGAAATTGAG ACAAACTATCTTATCCACTTTTCACAAGACGACTGATAATTTTGTTAAAATGATTTATAGATTTTGATGTTGGTTTCGTT TTTACAATTGCAGTACTGTTGCATGATCATGAGAATCAATGTTGATTGCAATGCTTGCTGCAGAAGATTAAGGAGAATCC TTCTAAGGATGAAAGGTAAAAGATTTTCACAATGAATCTAATCTATGTAAGTGTTATTGTTAAAAACAAAGAGAAACTAG GGAAATTCTAACAATTCTCATTGGTTATTGAAGTAATAGAGACTCATTTGATAGAGAAGCAGCAGCGCAGGGTATGTGTC TGTGGCAGATTTGTACCAGCAGATGTTGCAATCAAGATACAGAAGAAATTGAATCGTAGAGTTGAGATTCTTGAAGTACA GTTCGAAGGCGAAGAAGATCATAATGAACCACCATAGAAAGTAACCCAGGAGAGTTCAGAGAAACCTTAAAATGACCCAG AGATGCCTACGGCATAGTGTACATAATAGGCTACTTTGTAGCAGTTGTTTGTGGTTACTTTCAAAAGTACTATATGGAAA TTGTTGGGAAGAAGAAAATGGTAGACGATCTACGCAGAAAAATAATAATACACGTTACATGTAGAATTCTTAGAAGGACT TAATGTATGTACTTTACATGAATTGTTTGTCACATCAGAAAGTAAACTTGATAAATCTGTGTGCTCTTTCCACAGTTAAA ACTATTAAGTGTTTGTTCGGTTTTCGCCCAAAGGTTGGTTGGGTTTTCTTAGAATGTTTGTATGTGATTTCCAAAGTGCT CAAACGTGAAAGGTCAAAATTGTTTCGTTTACGTTTACATTCAACCTAAGGTAAACAAAAACATTGCTTAAGAATTCAAT TTGTGACTCTCACTCAATCAAACACAACTAAATAAAACAGACTTCTTTTTCAGCACCATAAGTCTAGAACCACTCAAACA GGAAGGAAGTAGCAAAAAGAGGGAAGCACATTTCATTGGGGAGTTAGTCATAGGAGGCTATTTGGGCAATGTGTTAGGAT GGAAGAAAAAGAAGGAATTATATGTTGCTAGGATATTCACATAATAATGTTCTTTCTGAAGTTGAAAAGGGAAGTTACTC AACTAGGGATGAATATCTAAGCTGTGGGAAAAGATGATATGGGAGAAGATGAGTAATGAATGTATTTGGCATAAGGCAGA AAACATGTAAACTTCTGGTGAAACAATTAAAAACAAATGACAGTCAAAAAGGAGAAGTATGAAGTATCAGTAGAAATCTC ATAATGCATACACAGAAACAACATCAAATATTAGCTGGATTCTATCTGCATATATAATCTTGGTTAAAATACTATAGAAA CATGTGGAGTAATTGAAAACATCAAATAAGTAGCGGGGGGTAGCTAAGAACTTGATGCAGTTTTGTTTTCTTCTATCCAA TATTCAAATCTCTAGTTTAGCACATTAAAGTTGAAGGGTGAAGCTAAATGTGGACAAACTTTCAGAGTGATTGTTGATTT CATATGTAACTAAACATCCTTCTGAATTGCATCTCAACAAAGTAATTTTACTTTTGGGTACACCATACTTGGCACTTTGC ATTAGACACTCAACAAAGTTACAGTATAACCAATAAAATCCTTGGATTCATGAAGAACCAAAACTAAACACAAACAGTTA TATAAAGCAAAATAAAAGGCATACCCTCGAACAGGAATTGAATACGAGTAACAGCTCTATAACGAGCAAGACTATCTACA ACGCAGCAGTTAATATTTGATTTTGAAGATGATTCAGAAGCAGCTGATGCAAAAAGTGCTACTTATCTAGCACAAGAACC AGCTGCCACAGCTGCTTCAAAACCCTGTAAATGCCCAAGCCAGAGAGAGATATAAAACTAGTGTTTAACCATCTCTATGG TAAGTACTGCTGTCCAGAAAATAGCTTGTTCAGATATTCTGTTACCTAATTTAGGTGGTTAAATATTATTATGTTAGCGG TAAATTAGGCATTTGTACCGCTGTGAAACTTTGTGTACAGCTTCTTTAATAGAAGAGGAGAGTCATAGTACCTCATGTGT ATATATGCAGCATTCATCGAACAATGTTATAAATTGGATGCTGACAGAAACTGGGAGAGAACTGAGCATTAGGCGGGTCA CTCTTAGCCCGTCCGGGGTGTTAGGATTAGGTTTTTCAATATTTCCAATTCGTCCAGAAAAGGCTGGACTGTGAAACATC CCTTAGGAAGACAACTTCTCAACACTTCAGGCCTATTTCAAGCTAACGCTTCCAATGATGGTTGCTTTAGGGAGTGAATT TGAGGTACGACTGTTAGCTAGTCAACGGTTGTCTCCAATTTGGCAACTTGAGAAGTATAATTGGGCAATTGGCAATGGCG GGATTCATTAGTTAAAATACAACTAGGGAACCTGAATGTCATAACCTTGATGCTTTCTCATTTAGTTTTACTAATTT
CDS sequence (LotjaGi2g1v0278500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTAGGCTGCACACATATCACAGGTATGGCTTTTGAAGATGGTGCCAAAAAGGAGATTCAGGAAGTTGGTAGAAAAAT CTCTATTGGGTCTAGTCTAGCATCTATGGAGTCTTTGTCCATGCCACTGGTTCAGGAGGTTGTTCTTTCTGCAGACATGC AATGTGAGAAGTGCCAGAAGAGGGTTACTGATATTATTACAAAAATGAATGTAGAGACAGAGTCTGTGGTGGTGAATGTG TTGGAGAAGCAAGTGACACTCACTTTTAGATTTCCAACTGTTGGTGAAGTAATCAGTAAGCAAATTACTCGCATCAACAG GAATCCCCTCCCTAAAAAAGTGGCCATTATCAAAAGGATATTTCGCTCTTCCAAAGGATCCACATGTGCACAATGA
Protein sequence (LotjaGi2g1v0278500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVGCTHITGMAFEDGAKKEIQEVGRKISIGSSLASMESLSMPLVQEVVLSADMQCEKCQKRVTDIITKMNVETESVVVNV LEKQVTLTFRFPTVGEVISKQITRINRNPLPKKVAIIKRIFRSSKGSTCAQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 43 | 108 | 66 | 7.6E-7 | – | |
| SUPERFAMILY | 46 | 104 | 59 | 8.25E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi2g1v0278500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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