Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0295900 |
| Transcript ID | LotjaGi2g1v0295900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; TAIR: AT2G03480.1 QUASIMODO2 LIKE 2; Swiss-Prot: sp|Q3EC77|PMT5_ARATH Probable methyltransferase PMT5; TrEMBL-Plants: tr|A0A0B2P2U1|A0A0B2P2U1_GLYSO Putative methyltransferase PMT4; Found in the gene: LotjaGi2g1v0295900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77073225..77075447) extracted from Lotus japonicus Gifu genome v1.2.
TTAGAAGTCTGGAGATCAGCTCTCAAGAATTACTGGTCTTTGCTTACACCACTAATATTCTCTGACCATCCAAAGAGACC AGGAGATGAAGATCCACTACCTCCATTTAACATGTTACGCAATGTGATGGACATGAGTTCTAAATATGGGGGCTTGAACA CTGCCCTCTTGGAAGAGAAAAAGTCAGTTTGGGTCATGAACGTTGTTCCTGCTAAGGCTTCTAATTCACTTCCTCTTATA TTAGATAGAGGTTTTGTTGGTGTTATGCATGACTGGTAAGTTTCTCTATATTCTTAGTCCAAGCAAGTTGTTGGGGGTCC TAGTAAAAGTTTTTATATAATTGATTGGCTGTCAGGCTAATGAACATGATAATAATATAATTAAGTCCTGATTAATGTAT ATATAGCGTACATTTTCCTTAGCACACTCTTGGAGCATACAGCAGAGAAGTGTATTCTAGCGGCTAGAGAAACTGTTTTT ATATTGATAGCTTGAAGAAGTGTGCAGTTCAAGACTTTTGACTGCTGAATATGAAAAAGTCCAATGAGTTAGTAGTGTTT GTATAATTCATACCCAAAAAATGAATTCAAGACAGTTGAAAATATTTAGCAAATGGAAGCTCACTAAATGCTTTATGGAG TAATTCACCGTGGTACTTTAAAGCTCCCGCCATGGTGGGGTCCTGGGAAGGTTTGGACCTATTGTGGATCCCTTTCAGGC AGTCTTAACTTGTACTTGCGCAAGAGATTGACTCCACAATTTGAACCCCGTGACCTAAATCAGTCACATGGCAGCAGCTC CAACCGTTGCGCTAAGGCTCCCCTTCTTAATGGAGTTACTCTACTTATTTAATAAAATTGTTGGTGTCACTCGTTTTGGT TAATGTAGCCTCATTTTACTTTTTAAAGAGGCTTCAAGGAAATCCTGATTGAGACAGACTCAAGCAGTGCAGCGTATTTC CTATATGGGTTGCATTGACAGACATCCTTGCTATCCTTTGATCACAGAGTTCAAGGAGCTTCTCAGACAGGCTGAGGGCG TTCGACTCATGTCCACCGAGAGGGAAACACTCTTGATTCCCTTGCAAAGTTCGGCCAATCCCTCCCCTGTCCTCTAAAGA TATTTGACTATATTCCTCCTATTGTTCGTCCGTTTGTTTTCTCTAACTTCTCTCAGACCATAGAGGAGAATAAGCTTGTA ATTTCATTTCAGCCCCTTTGATGCATTGAGAAATTAAAATAGTCACCAGTATCCTTCATACGTGTTCAACTCATAAATAT ATATTTTCAAACATCAATTTGTGTCACCTTCAATGCTGAAATTTAGTAAGTTTTATTGAACGCACCTTTACCATTCTTAA TTTGGTTTTCCCTATTGAGACTGAGTTTGGAGATAGAATGTAGCAAGCATGCATGCATATACTTCATCTGATGGCTTAAA AGTAAAAACTACTTCACTTGGATTATTGCAGAATCAAGTTGAAAGAAGATCCATTTCGGAATTTGATCTTTAAATTTTCT TTTCACTAGAGTACAAGTGTCATTTTTAAGATTTGGTTATTTGTGATTAATCTTCAGGTGTGAACCTTTCCCCACTTACC CTCGGACATATGATTTGCTTCATGCAAATGGACTTCTCTCTCATCTTGCATCAGAGAGGTGCAGCATGATAAACTTATTT TTGGAAATGGATAGAATACTGCGACCAGAGGTACAATGTTCCTCCCTTCTATTTATTGTCATGACTTTGTGCTGGAATGA TCAGTTTGCTAACTTCTTTTTTGTATTATCAGTATGTTAAAAATATATCAATTATTGGCAGAACAGTCATTCTTCTTCCT TTCAAGTTTCAACATTTTTTAAATTTTGACATGTCCCCCAGCATGATGAGTGATAGATTCTTAGCATTTGGCTCTAAGCA CGGATGCTCATTTCTTTGTGCAGTGAACAATCAAAACAATTCTTTAGAATTTATTATGATTTTTTCTTTGAATTTAAGTA ATTTATAGTGTCAATACATTGGGAATGGTATGCGAAGCCAAATATGTTGACATACCATTACATGAATTGGTAGGGATGGG TGATTCTATCTGATAACGTTGGAGCTATAGAGATGGCTCGCACACTTGCAGCACAAGTAAGCTGGGAAGCAAGGTTAATT GATCTTCAGAATGGCAGTGACCAACGGCTTCTTGTTTGCCAGAAACCATTTTTGAAAAAATGA
CDS sequence (LotjaGi2g1v0295900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTACGCAATGTGATGGACATGAGTTCTAAATATGGGGGCTTGAACACTGCCCTCTTGGAAGAGAAAAAGTCAGTTTG GGTCATGAACGTTGTTCCTGCTAAGGCTTCTAATTCACTTCCTCTTATATTAGATAGAGGTTTTGTTGGTGTTATGCATG ACTGGTGTGAACCTTTCCCCACTTACCCTCGGACATATGATTTGCTTCATGCAAATGGACTTCTCTCTCATCTTGCATCA GAGAGGTGCAGCATGATAAACTTATTTTTGGAAATGGATAGAATACTGCGACCAGAGGGATGGGTGATTCTATCTGATAA CGTTGGAGCTATAGAGATGGCTCGCACACTTGCAGCACAAGTAAGCTGGGAAGCAAGGTTAATTGATCTTCAGAATGGCA GTGACCAACGGCTTCTTGTTTGCCAGAAACCATTTTTGAAAAAATGA
Protein sequence (LotjaGi2g1v0295900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLRNVMDMSSKYGGLNTALLEEKKSVWVMNVVPAKASNSLPLILDRGFVGVMHDWCEPFPTYPRTYDLLHANGLLSHLAS ERCSMINLFLEMDRILRPEGWVILSDNVGAIEMARTLAAQVSWEARLIDLQNGSDQRLLVCQKPFLKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 148 | 148 | 7.3E-88 | – | |
| PANTHER | 1 | 148 | 148 | 7.3E-88 | ||
| Pfam | 2 | 143 | 142 | 6.3E-53 | ||
| Gene3D | 45 | 139 | 95 | 2.5E-6 | – | |
| SUPERFAMILY | 45 | 120 | 76 | 1.45E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi2g1v0295900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…