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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0298500 |
| Transcript ID | LotjaGi2g1v0298500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sporulation protein RMD1; TAIR: AT1G69380.1 sporulation protein (DUF155); Swiss-Prot: sp|Q03441|RMD1_YEAST Sporulation protein RMD1; TrEMBL-Plants: tr|A0A151TA36|A0A151TA36_CAJCA Sporulation protein RMD1; Found in the gene: LotjaGi2g1v0298500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77311195..77315285) extracted from Lotus japonicus Gifu genome v1.2.
GAAGAGAAAAGAATGAAAGAGTGAGACAATGAATAATTGAATATAGACACAAGAGAACAACAACAACAATAACAGAGGAA GAAGGAACAACAGCAGATTCCGACGGCGAATGGGTGGAAGATGGAGAACAACCCTTCCCCTTTTCTTCTCTAGCCGCCGC CTCCGCATACGCACAGCACCTCCTTCTCACTTCGCTTCCTCCGTCACCCGTTTCTTCACTGCTGCATCTTCTTCTGCTAT CCCCTGCCATGACGACCTTGATCCCCTTCACATGGACAGGTTCGGAGCCCCGGAACAAGACGACCCTTCTGTGAAAATCC CCATCAAAGCCTTCTTCCTCTCCACCAGGTATCCCCCCCCCCCCACTTACCCATCTCTAACAGCTGCTTCAAGTTGCTTC ATTTCTGTTCTCGCTTTTATTATCTTATCAATTCCGCAAATGGGTCGTTCTCAAATCTTGTTTCTCTGCTGTTACCTGTG ATTTCTGTTACTGTTGCATTAGTGTTGGATTTTGAACAGAAAACTATGTTATGTGTGTGTGTGTGAGATTGCTAGTAGTA TCTTTAGATTTGTAATTTTGATTGCTGTTATTGTTTTTGTCATTATTAGTATTCATTCTGATGAGTAAAATTTGCAGCTT ATTATTTGTATCTTTGCTTGTGTTGTGTTTCTCTTTTGTTCTATCTACTGCTTTAGAATTATGATTTTTCTGTCTAGTGT TAGACCATGTTGTGTGAGCATTATAAATTTGTTGCATTTATGATATTAGATTTGGGATCCATGGAATATGGAGCATTTAT TTTTAATTTATGTGTATAAAAGAGGTGACTTAATGCTTGTATATGGCTTATAGGGTGATTAGGGTCCTACCTACATGCCT ATTCAATACATACATATGAAGAGAGTAAGACACAATTTTAACATGAGGGAACATGAGAGAAATTTCACATGTGATGATCC TAATCCGATTTATAGGTTGAGGTTTTTTTGTGTTCCTTTGACAATGATGCATTCTATTTTTCCATGCTTATTGGGTTTGA ATTGAATGAAATCCCTTTCCCCTCACATGTGCTTTTGTTGTTCTGTTCGCGTTCTCTATGATTTGGCTGTCTCAGATTCA CAATTTTGGCAGTATAAATTTGAAGGGCGTTCAGGCTGACAATCCGAGAAATGTCGTTCCTCCATCTTCCCGCTCATCAT CAAACTACGTTGCTCTCCGGTTCTGTGACTTCAATACGGACTCTATTGTAAGATTTTATTTTATTTATTTTCTCCAGAAT ATTTTTGTGCTCTATAGGAAGTTACGAGTGACGACCTTGATATAGAACTTAAGTATCTCTACTCTGTGCATCATTTTCTG CAATACCTTGTTTGTTAGAATAGAACTCCTCTTTCTTTGTGGATGTTCCTGTGGGGGTACCATGTGCAATTCCCACACTG GACTGGATTTATGAGGGCAGATTTCTAATATGGTTGTATCGGTGAAATTGTGTGTGCATTTGAAGGTTAAGGATAAGATA AGAGGAATTTCAGAGTCTAATTTCTCTTCCATTTTTTCGAACTGGACGGGCAGGTGCCAAGCTGCATCCTAAATGGCAAT GATTTATCATTGATGATTAGTAAATGAATACATTCTTGTCTATCAAAAGGGAAAATAATACTCCTTGGTTAAGCAGGATT ATGAGAAGAATAAGGCTAGAAACTCCCTCTCTAACACATTTTTTCAATACACTATTTATTATTGGATTGAATTCAAGTCA GATCCACTAAACCATTGGAGTCTCACTCCCAGTGAGACTCGTATGAACTCCACCCAGTAATGTAATTTTAAATGAGTGTT TCGAAGAGTGTGTTATTAGCATTTGTTGAGAAGAGAAAATCTCATTAAACTTGTACAATATAACAACGTAATTGGTCAAA GAATCTCTGAACAACTTGAGGCACTTTATTCAGGGAGCTGGATTTCATGTGAAAGCAAGCAGCTCTCGTTACATGGTTGT ATACCAGTATGGGTCTGCTGTTTTGTTTAATATCGAGGATCATGAAGTGGACATTTACCTTGAGCTAGTTAAGAGGCATG CATCTGGTTTACTTTCAGAGATGAGGAAAGATGGTAAGTTTTTTCAAAGAAACTAATTAATCATATAGTTTTTCTGAATC CTGTTGTGTATCTTTAACCTGTTCTATGTGATTAGATTATGCAATAAAGGAGAGGCCACAATTAGACGAGGATATGCAAG GAGGTCCGGACTACATAGTCCTGAAATCATTAGACACTGATGGTATCCGTCTGATTGGAAGTGTACTAGGACAAAGCATA GCACTGGATTATTTTGTCTCACAGGTTGAGATGTGCCAGATGACATATTAAGCCAGTTTGTTTTTAGTGTGTTTAAGCTT TTTAAAAAATGGATTCATTAACATCAGACCGTAGAGTTGAGGATAACGATACAAAAAATGGATTTTGTAATTTTTGGGAA ATGAAGGATTGATTTCACTTTTGTATTTATGATGTAATAAACATTTGCCTTTGATAAGTTTTTCCACTTTTAGAATCTTC CCTATGTTGCCAAACTGTTAAAAAAATCAGCATGAAAAAAAATGAGTCATTGTTTTGCACAATCTTAAAATAATTTTTTT CAAAAACTTGAACAAATGGATCCATTATTTCCAAAGCTTTGGGCCATATTCAATATCCTAAAGAAGAAAGATGACCACTG AAAATTTGACATTTGTTTTCTCATATTATCAGGTTGATGGTTTAGTTGAAGAGTTTGCAGGCATAAACCGTGGAATGGAG AAATCAGGAACTTTCACTATGGATAAGAAGAAACTGCTTCAGCTTGTTGGGAAGGCAAACTCAAATTTGGCTGATGTGAT TCTTAAAGTTGGTCTCTTTGAGAGGTATTATCATTCATGTTTAGGCATTAGAAAAACATGCATCTGTAAATGTAAGAATA TGTTGAAATTTTCATAATTTAGTGTCCCAAGTATTTCATATATTTTTTTTGAACTTGTTCTTAGCTTCTTTATTAATGTT CAAATGTGGATGAATCAGATCGGAAATAGCTTGGAGGGATGCAAAGTATGCTGAAATATATGAGTACTTGCGAGAGGAGT ATGAAGTTGCACAACGCTTTGGAAACCTAGATTACAAATTGAAGTTCGTTGAGGTATTTCTACTCATTATATATGCATTA GCAAACATAAGATTTGAAAAAGAAATTATTGTCTAATCAAGGCTTATAACATTGATTTGGTTGTTTGCAGCATAATATTC ATTTTCTGCAAGAAGTTCTCCAGAACAGGAAGTCAGATTTCTTGGAATGGTGCATTATTGGTCTATTGACTATTGAAAAT GTTATATCCTTTTATGAGATAATTCATGCTTCAAATACAGTTTCTTAGGAAAGTAGTTAGAGAGGCTGTTGCTAGAATAA TTTATTGTAACAGTTCTTACCATTTTTGGGCTAATCAATTTTTCCCCTTTTGTATTCATTATAAATCAAATCCACATATT CATCCACTTGTATGAAATTTAGTGGAAATCTTGAAACTTGTATAGTTTCTAAGAACACCTAATAATCCTTGATGAAAAAT AGGATATCAGCTATATTTATGAAATTTATGCTTCTTAGTACCTTTTCTGCTTGGATACATGAGCATCAGTTTCACTGTTT CTGTATTGTTCTAACCGAAACTTGTGTTCATAGTGTACCACCTGTGATGGTTAAGTAAAAGCGAGTTTATTATGACAAAA ACAGAAAAAAAGAAGTCAATGGTATCTGCAGATTGGAGGTTAACAAAGAGATGAGGAAAGATAGAAAGAATGAGGAATGT GATGAGTGATGTAATAAAAAAAAGTGAGAAAGGTGAAAAAAATAGGAGTGTGAAGAAGTTGTCAAAGCATAGGACTACTA AAATTTTGCCTCATTTCTAAATTCAATATTTGTCCGTATTAATATCAGGATATATCTATTGGTATCAAAATAAAGATAAA CTAAAATTCTTCTAATGGATTTGAATGAATGTTCATTCACGCTTCACTTAATTGGTATCCAAAAGCCATTTCACCACAGT TTTAAGCTACA
CDS sequence (LotjaGi2g1v0298500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGGAAGATGGAGAACAACCCTTCCCCTTTTCTTCTCTAGCCGCCGCCTCCGCATACGCACAGCACCTCCTTCTCA CTTCGCTTCCTCCGTCACCCGTTTCTTCACTGCTGCATCTTCTTCTGCTATCCCCTGCCATGACGACCTTGATCCCCTTC ACATGGACAGGTTCGGAGCCCCGGAACAAGACGACCCTTCTGTGAAAATCCCCATCAAAGCCTTCTTCCTCTCCACCAGT ATAAATTTGAAGGGCGTTCAGGCTGACAATCCGAGAAATGTCGTTCCTCCATCTTCCCGCTCATCATCAAACTACGTTGC TCTCCGGTTCTGTGACTTCAATACGGACTCTATTGGAGCTGGATTTCATGTGAAAGCAAGCAGCTCTCGTTACATGGTTG TATACCAGTATGGGTCTGCTGTTTTGTTTAATATCGAGGATCATGAAGTGGACATTTACCTTGAGCTAGTTAAGAGGCAT GCATCTGGTTTACTTTCAGAGATGAGGAAAGATGATTATGCAATAAAGGAGAGGCCACAATTAGACGAGGATATGCAAGG AGGTCCGGACTACATAGTCCTGAAATCATTAGACACTGATGGTATCCGTCTGATTGGAAGTGTACTAGGACAAAGCATAG CACTGGATTATTTTGTCTCACAGGTTGATGGTTTAGTTGAAGAGTTTGCAGGCATAAACCGTGGAATGGAGAAATCAGGA ACTTTCACTATGGATAAGAAGAAACTGCTTCAGCTTGTTGGGAAGGCAAACTCAAATTTGGCTGATGTGATTCTTAAAGT TGGTCTCTTTGAGAGATCGGAAATAGCTTGGAGGGATGCAAAGTATGCTGAAATATATGAGTACTTGCGAGAGGAGTATG AAGTTGCACAACGCTTTGGAAACCTAGATTACAAATTGAAGTTCGTTGAGCATAATATTCATTTTCTGCAAGAAGTTCTC CAGAACAGGAAGTCAGATTTCTTGGAATGGTGCATTATTGGTCTATTGACTATTGAAAATGTTATATCCTTTTATGAGAT AATTCATGCTTCAAATACAGTTTCTTAG
Protein sequence (LotjaGi2g1v0298500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGGRWRTTLPLFFSSRRLRIRTAPPSHFASSVTRFFTAASSSAIPCHDDLDPLHMDRFGAPEQDDPSVKIPIKAFFLSTS INLKGVQADNPRNVVPPSSRSSSNYVALRFCDFNTDSIGAGFHVKASSSRYMVVYQYGSAVLFNIEDHEVDIYLELVKRH ASGLLSEMRKDDYAIKERPQLDEDMQGGPDYIVLKSLDTDGIRLIGSVLGQSIALDYFVSQVDGLVEEFAGINRGMEKSG TFTMDKKKLLQLVGKANSNLADVILKVGLFERSEIAWRDAKYAEIYEYLREEYEVAQRFGNLDYKLKFVEHNIHFLQEVL QNRKSDFLEWCIIGLLTIENVISFYEIIHASNTVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 36 | 351 | 316 | 5.0E-185 | – | |
| PANTHER | 36 | 351 | 316 | 5.0E-185 | – | |
| Pfam | 132 | 302 | 171 | 8.0E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0298500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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