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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0298900 |
| Transcript ID | LotjaGi2g1v0298900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cell division topological specificity factor-like protein; TAIR: AT1G69390.1 homologue of bacterial MinE 1; Swiss-Prot: sp|Q9C4Z7|MINE1_ARATH Cell division topological specificity factor homolog, chloroplastic; TrEMBL-Plants: tr|I3SM72|I3SM72_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0298900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77331749..77334484) extracted from Lotus japonicus Gifu genome v1.2.
ATGCAATCCATAAATAAGTGAGAGAGGCAAATGCAAAAATATACTAGTAGTATGTTATTAAAATAAGAAAATTCTTAAAA GAATAAAAACAAGTAAAGAAAAAGAAGGGTAAAACGACGACGTAACAGTAGAGGGGAAGTAGGAATATTGTTAGCTGAGA GGAGAGTGAGAACTGAGAGTAGAAACCAGAGCAGTGCAGAATCAGCAGCTACCGTCAACAATGGCGATTTCCGGCGATCT CAGGGCCTCCGTCTCGGCAACTCTTCCACTCCATCACTCCCACCCGCTTCCAACCCGCTCATTCCATTCCACAAAGGTTC TGTACTTCTCTCTCATCTCTCTATTTCGAATTTCGCATGCTCTGAACTCAACACAAGCGCTTCTTGTACCACTTTGGAGG ATGCAATATGCATCAATTCTTACCGGGAATCTGATATTGTTGAAGGATTTACATCCTTGTTACTCTAATGTCGAGTAACA GCTCAGGGTGTTTAGGATTCTGAATTTTTCAATTAGGGTTTTCATTTTAGTCCAAATTGAGCATTTCGTTTCTCTTGCGG TGTTGTTCTGATTCTTCAACTGGGTTTTAAATCGTGATTGCTTGTATTTCAACTATGAAGCTCTTCGGATTAGGAAGATA AAAATAAACTTGTAACTGTTCAAAGATTAATAATATTGATAATGACGGCATTAAAGTTAGTTTGACCCTTTAATGTATGC ATTGGTTGCATTCACTATCATTTGGCAATTGGCATGTAAAAGGTGAAAATTTTCCACTCTAGTACTTGTAGGGGTGAGCG AATGTACAATTAGATGGCATCTGTGATTGACCGATTGCTCTCGGATGTAGCAAATTTTGGGTGCTTTTTCAAATGACTGA AATACATGAAATCATTAGACATAATTGACAACATTATATTTCAATGTCATTTGATGCATCATGTAAATAATTCCACTTCC TTTTGATGTTACTGCCTATTATCTACTGTGATTGCTGAATCATTTTTCTTTGTATCTATCTTCAATTGGAAGTGATAAGA GATCTTATTAGGACATATTGATATGATAACCTGCATTCTTATAAGTTGTAACCCTATTTCATGGTCCTCCAGGCAAGTAT AAGAGGAGGGATATCACTGTTTTTCCATCTTATGTCATTTGATGGGAAATATGTGTGGTGAAGCAATGGTAGGGTGCTTG TCTTATAGACATTAGTGAACAAATATTTAGTTTTTTACTATTTTAGCTGGGCTGATCAGTATGCTTAAACAGGATACACG TTTTTCCTTTCTGTCTTTTAGTTGGGGGTTTGATAAATGATGGTGTATGTTTCTATTATCAAGGTATTTCTATTCAGATG CTTGTGGCTTAGCTTCATAAATGTTTTACTGTTGATTAATGTTCAAGTTTATCTATATATTATACAGATCCTAACAAGAT TTAGAAAGTGCTGGAAATGCTTCTCATTCATTTCTTAAATTTTCTATCTAATAGGTAGACTTTCATTTCTTCTTGAGTGG AGCATCTAGCATCTCTGAATTCGCCCCAAAATGTCCTAGCCTGACAACTGCACGAAGCAATATGCGTGGCTATTGCAAGC CAGTTTCAGCAATCCTTGGAGGTCCTAAATCTTCCTCAAAGTCAGTTAGCCAAGAGGTTGAGAATTTTCTCCTTGATGCT GTTAATATGAGTTTATTTGAGCGTTTAAATTTGGCTTGGAAGATACTTTTCCCGTCAGCTGTATCTAGAAAAAGATCCAA TGCGAGGATTGCCAAGCAACGCTTGAAGATGATTTTGTTCTCTGATCGATGCGAAGTAAGTGATGAGGCAAAACGAAAAA TTGTTACCAACATTGTGCAATCTTTATCAGATTTTGTGGAAATAGAATCACAGGATAAGGTTCAGCTGAGTGTCTCTGCA GATACAGATCTGGGAACTATTTACTCTGTCACGGTGCCTGTACGGCGGGTTAAACCAGAATATCAAGATTTGGATGAAGC TGGGAAAATAATGAATGTTGAGTATAAGGACACCGGAGACAGCTCTGGTTGTGTTGATGTTAGATTTGATTTCTTTGTCC CTGATGAAAGTTCTTGACTTTGATTTGAAAGTTTTTGAATCTTGATCTTTGTCAAAAGTTGGTATTTGAAATTCTGCCAA GTGAAGCCATTTTGGAGTGCTGTATATATTTGCAATTTTTTCTTCGTCTGTGGTGGTATATATTTGCAAATTGAAGCTAA CATTAGGGTGAATCTAGATTCTGATGAGATATTTTGTACCACCTTTATCTGTCAGTTTGGTTTTATGCTCCGTTTTGATC TGTTCTTACTTAACATTCATAATAGGCTTTTGTTGCTAGAGTGTATGAATCATTATGATTTATGGAGCTGGTAGTTGATT CCCATTGGCCAATGAAAAAGAGGTGATAGTATAACCTTCAGGTGATGAGTCAAGGCAAAACCAGCCTTTCTATTCATTTG GTTGCATTTTTTTGGTCAACATTTGGTAGCATTTAAAGTTGTAATTGGATCAATACCCATGCGCCATACATGCTACATGA ATTCGGAAGCATATATTTTATTTCAGAATAATGAGTAAAAGCTTGACACAACTCGTCACAAGTTTTGGATTTAACTCTCA CCTCCTCGTAGGTCGCAAGTTCGAAAAGTCTAGAGGTCTTTCTCTCTATTCTACCATTCTTGTAACCACGAAAAGAATAG GGCATTGCTGTCCTTT
CDS sequence (LotjaGi2g1v0298900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGATTTCCGGCGATCTCAGGGCCTCCGTCTCGGCAACTCTTCCACTCCATCACTCCCACCCGCTTCCAACCCGCTC ATTCCATTCCACAAAGGTAGACTTTCATTTCTTCTTGAGTGGAGCATCTAGCATCTCTGAATTCGCCCCAAAATGTCCTA GCCTGACAACTGCACGAAGCAATATGCGTGGCTATTGCAAGCCAGTTTCAGCAATCCTTGGAGGTCCTAAATCTTCCTCA AAGTCAGTTAGCCAAGAGGTTGAGAATTTTCTCCTTGATGCTGTTAATATGAGTTTATTTGAGCGTTTAAATTTGGCTTG GAAGATACTTTTCCCGTCAGCTGTATCTAGAAAAAGATCCAATGCGAGGATTGCCAAGCAACGCTTGAAGATGATTTTGT TCTCTGATCGATGCGAAGTAAGTGATGAGGCAAAACGAAAAATTGTTACCAACATTGTGCAATCTTTATCAGATTTTGTG GAAATAGAATCACAGGATAAGGTTCAGCTGAGTGTCTCTGCAGATACAGATCTGGGAACTATTTACTCTGTCACGGTGCC TGTACGGCGGGTTAAACCAGAATATCAAGATTTGGATGAAGCTGGGAAAATAATGAATGTTGAGTATAAGGACACCGGAG ACAGCTCTGGTTGTGTTGATGTTAGATTTGATTTCTTTGTCCCTGATGAAAGTTCTTGA
Protein sequence (LotjaGi2g1v0298900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAISGDLRASVSATLPLHHSHPLPTRSFHSTKVDFHFFLSGASSISEFAPKCPSLTTARSNMRGYCKPVSAILGGPKSSS KSVSQEVENFLLDAVNMSLFERLNLAWKILFPSAVSRKRSNARIAKQRLKMILFSDRCEVSDEAKRKIVTNIVQSLSDFV EIESQDKVQLSVSADTDLGTIYSVTVPVRRVKPEYQDLDEAGKIMNVEYKDTGDSSGCVDVRFDFFVPDESS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 231 | 231 | 6.8E-80 | – | |
| PANTHER | 1 | 231 | 231 | 6.8E-80 | ||
| Pfam | 122 | 189 | 68 | 7.4E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of division septum assembly | Any process that modulates the frequency, rate or extent of division septum formation. division septum formation is the assembly and arrangement of a septum that spans the plasma membrane interface between progeny cells following cytokinesis. | ||
| Biological process | Cell division | The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells. |
Expression pattern of LotjaGi2g1v0298900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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